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 Clustering


Estimating Staged Event Tree Models via Hierarchical Clustering on the Simplex

Shoaib, Muhammad, Riccomagno, Eva, Leonelli, Manuele, Varando, Gherardo

arXiv.org Machine Learning

Staged tree models enhance Bayesian networks by incorporating context-specific dependencies through a stage-based structure. In this study, we present a new framework for estimating staged trees using hierarchical clustering on the probability simplex, utilizing simplex basesd divergences. We conduct a thorough evaluation of several distance and divergence metrics including Total Variation, Hellinger, Fisher, and Kaniadakis; alongside various linkage methods such as Ward.D2, average, complete, and McQuitty. We conducted the simulation experiments that reveals Total Variation, especially when combined with Ward.D2 linkage, consistently produces staged trees with better model fit, structure recovery, and computational efficiency. We assess performance by utilizing relative Bayesian Information Criterion (BIC), and Hamming distance. Our findings indicate that although Backward Hill Climbing (BHC) delivers competitive outcomes, it incurs a significantly higher computational cost. On the other, Total Variation divergence with Ward.D2 linkage, achieves similar performance while providing significantly better computational efficiency, making it a more viable option for large-scale or time sensitive tasks.


Semi-crowdsourced Clustering with Deep Generative Models

Neural Information Processing Systems

We consider the semi-supervised clustering problem where crowdsourcing provides noisy information about the pairwise comparisons on a small subset of data, i.e., whether a sample pair is in the same cluster. We propose a new approach that includes a deep generative model (DGM) to characterize low-level features of the data, and a statistical relational model for noisy pairwise annotations on its subset. The two parts share the latent variables. To make the model automatically trade-off between its complexity and fitting data, we also develop its fully Bayesian variant. The challenge of inference is addressed by fast (natural-gradient) stochastic variational inference algorithms, where we effectively combine variational message passing for the relational part and amortized learning of the DGM under a unified framework. Empirical results on synthetic and real-world datasets show that our model outperforms previous crowdsourced clustering methods.


Data-Driven Clustering via Parameterized Lloyd's Families

Neural Information Processing Systems

Algorithms for clustering points in metric spaces is a long-studied area of research. Clustering has seen a multitude of work both theoretically, in understanding the approximation guarantees possible for many objective functions such as k-median and k-means clustering, and experimentally, in finding the fastest algorithms and seeding procedures for Lloyd's algorithm. The performance of a given clustering algorithm depends on the specific application at hand, and this may not be known up front. For example, a typical instance may vary depending on the application, and different clustering heuristics perform differently depending on the instance. In this paper, we define an infinite family of algorithms generalizing Lloyd's algorithm, with one parameter controlling the the initialization procedure, and another parameter controlling the local search procedure. This family of algorithms includes the celebrated k-means++ algorithm, as well as the classic farthest-first traversal algorithm. We design efficient learning algorithms which receive samples from an application-specific distribution over clustering instances and learn a near-optimal clustering algorithm from the class. We show the best parameters vary significantly across datasets such as MNIST, CIFAR, and mixtures of Gaussians. Our learned algorithms never perform worse than k-means++, and on some datasets we see significant improvements.



Scalable Uncertainty Quantification for Black-Box Density-Based Clustering

Bariletto, Nicola, Walker, Stephen G.

arXiv.org Machine Learning

We introduce a novel framework for uncertainty quantification in clustering. By combining the martingale posterior paradigm with density-based clustering, uncertainty in the estimated density is naturally propagated to the clustering structure. The approach scales effectively to high-dimensional and irregularly shaped data by leveraging modern neural density estimators and GPU-friendly parallel computation. We establish frequen-tist consistency guarantees and validate the methodology on synthetic and real data.


Low-degree Lower bounds for clustering in moderate dimension

Carpentier, Alexandra, Verzelen, Nicolas

arXiv.org Machine Learning

We study the fundamental problem of clustering $n$ points into $K$ groups drawn from a mixture of isotropic Gaussians in $\mathbb{R}^d$. Specifically, we investigate the requisite minimal distance $Δ$ between mean vectors to partially recover the underlying partition. While the minimax-optimal threshold for $Δ$ is well-established, a significant gap exists between this information-theoretic limit and the performance of known polynomial-time procedures. Although this gap was recently characterized in the high-dimensional regime ($n \leq dK$), it remains largely unexplored in the moderate-dimensional regime ($n \geq dK$). In this manuscript, we address this regime by establishing a new low-degree polynomial lower bound for the moderate-dimensional case when $d \geq K$. We show that while the difficulty of clustering for $n \leq dK$ is primarily driven by dimension reduction and spectral methods, the moderate-dimensional regime involves more delicate phenomena leading to a "non-parametric rate". We provide a novel non-spectral algorithm matching this rate, shedding new light on the computational limits of the clustering problem in moderate dimension.


Supervising Unsupervised Learning

Neural Information Processing Systems

We introduce a framework to transfer knowledge acquired from a repository of (heterogeneous) supervised datasets to new unsupervised datasets. Our perspective avoids the subjectivity inherent in unsupervised learning by reducing it to supervised learning, and provides a principled way to evaluate unsupervised algorithms. We demonstrate the versatility of our framework via rigorous agnostic bounds on a variety of unsupervised problems. In the context of clustering, our approach helps choose the number of clusters and the clustering algorithm, remove the outliers, and provably circumvent Kleinberg's impossibility result. Experiments across hundreds of problems demonstrate improvements in performance on unsupervised data with simple algorithms despite the fact our problems come from heterogeneous domains. Additionally, our framework lets us leverage deep networks to learn common features across many small datasets, and perform zero shot learning.



Empirical Cumulative Distribution Function Clustering for LLM-based Agent System Analysis

Watanabe, Chihiro, Sun, Jingyu

arXiv.org Machine Learning

Large language models (LLMs) are increasingly used as agents to solve complex tasks such as question answering (QA), scientific debate, and software development. A standard evaluation procedure aggregates multiple responses from LLM agents into a single final answer, often via majority voting, and compares it against reference answers. However, this process can obscure the quality and distributional characteristics of the original responses. In this paper, we propose a novel evaluation framework based on the empirical cumulative distribution function (ECDF) of cosine similarities between generated responses and reference answers. This enables a more nuanced assessment of response quality beyond exact match metrics. To analyze the response distributions across different agent configurations, we further introduce a clustering method for ECDFs using their distances and the $k$-medoids algorithm. Our experiments on a QA dataset demonstrate that ECDFs can distinguish between agent settings with similar final accuracies but different quality distributions. The clustering analysis also reveals interpretable group structures in the responses, offering insights into the impact of temperature, persona, and question topics.