Clustering
Distribution Guided Active Feature Acquisition
Human agents routinely reason on instances with incomplete and muddied data (and weigh the cost of obtaining further features). In contrast, much of ML is devoted to the unrealistic, sterile environment where all features are observed and further information on an instance is obviated. Here we extend past static ML and develop an active feature acquisition (AFA) framework that interacts with the environment to obtain new information on-the-fly and can: 1) make inferences on an instance in the face of incomplete features, 2) determine a plan for feature acquisitions to obtain additional information on the instance at hand. We build our AFA framework on a backbone of understanding the information and conditional dependencies that are present in the data. First, we show how to build generative models that can capture dependencies over arbitrary subsets of features and employ these models for acquisitions in a greedy scheme. After, we show that it is possible to guide the training of RL agents for AFA via side-information and auxiliary rewards stemming from our generative models. We also examine two important factors for deploying AFA models in real-world scenarios, namely interpretability and robustness. Extensive experiments demonstrate the state-of-the-art performance of our AFA framework.
A Global Medical Data Security and Privacy Preserving Standards Identification Framework for Electronic Healthcare Consumers
Mishra, Vinaytosh, Gupta, Kishu, Saxena, Deepika, Singh, Ashutosh Kumar
Electronic Health Records (EHR) are crucial for the success of digital healthcare, with a focus on putting consumers at the center of this transformation. However, the digitalization of healthcare records brings along security and privacy risks for personal data. The major concern is that different countries have varying standards for the security and privacy of medical data. This paper proposed a novel and comprehensive framework to standardize these rules globally, bringing them together on a common platform. To support this proposal, the study reviews existing literature to understand the research interest in this issue. It also examines six key laws and standards related to security and privacy, identifying twenty concepts. The proposed framework utilized K-means clustering to categorize these concepts and identify five key factors. Finally, an Ordinal Priority Approach is applied to determine the preferred implementation of these factors in the context of EHRs. The proposed study provides a descriptive then prescriptive framework for the implementation of privacy and security in the context of electronic health records. Therefore, the findings of the proposed framework are useful for professionals and policymakers in improving the security and privacy associated with EHRs.
SPHINX: Structural Prediction using Hypergraph Inference Network
The importance of higher-order relations is widely recognized in a large number of real-world systems. However, annotating them is a tedious and sometimes impossible task. Consequently, current approaches for data modelling either ignore the higher-order interactions altogether or simplify them into pairwise connections. In order to facilitate higher-order processing, even when a hypergraph structure is not available, we introduce Structural Prediction using Hypergraph Inference Network (SPHINX), a model that learns to infer a latent hypergraph structure in an unsupervised way, solely from the final node-level signal. The model consists of a soft, differentiable clustering method used to sequentially predict, for each hyperedge, the probability distribution over the nodes and a sampling algorithm that converts them into an explicit hypergraph structure. We show that the recent advancement in k-subset sampling represents a suitable tool for producing discrete hypergraph structures, addressing some of the training instabilities exhibited by prior works. The resulting model can generate the higher-order structure necessary for any modern hypergraph neural network, facilitating the capture of higher-order interaction in domains where annotating them is difficult. Through extensive ablation studies and experiments conducted on two challenging datasets for trajectory prediction, we demonstrate that our model is capable of inferring suitable latent hypergraphs, that are interpretable and enhance the final performance.
Media Framing through the Lens of Event-Centric Narratives
Das, Rohan, Chandra, Aditya, Lee, I-Ta, Pacheco, Maria Leonor
From a communications perspective, a frame defines the packaging of the language used in such a way as to encourage certain interpretations and to discourage others. For example, a news article can frame immigration as either a boost or a drain on the economy, and thus communicate very different interpretations of the same phenomenon. In this work, we argue that to explain framing devices we have to look at the way narratives are constructed. As a first step in this direction, we propose a framework that extracts events and their relations to other events, and groups them into high-level narratives that help explain frames in news articles. We show that our framework can be used to analyze framing in U.S. news for two different domains: immigration and gun control.
Clustering Alzheimer's Disease Subtypes via Similarity Learning and Graph Diffusion
Wei, Tianyi, Yang, Shu, Tarzanagh, Davoud Ataee, Bao, Jingxuan, Xu, Jia, Orzechowski, Patryk, Wagenaar, Joost B., Long, Qi, Shen, Li
Alzheimer's disease (AD) is a complex neurodegenerative disorder that affects millions of people worldwide. Due to the heterogeneous nature of AD, its diagnosis and treatment pose critical challenges. Consequently, there is a growing research interest in identifying homogeneous AD subtypes that can assist in addressing these challenges in recent years. In this study, we aim to identify subtypes of AD that represent distinctive clinical features and underlying pathology by utilizing unsupervised clustering with graph diffusion and similarity learning. We adopted SIMLR, a multi-kernel similarity learning framework, and graph diffusion to perform clustering on a group of 829 patients with AD and mild cognitive impairment (MCI, a prodromal stage of AD) based on their cortical thickness measurements extracted from magnetic resonance imaging (MRI) scans. Although the clustering approach we utilized has not been explored for the task of AD subtyping before, it demonstrated significantly better performance than several commonly used clustering methods. Specifically, we showed the power of graph diffusion in reducing the effects of noise in the subtype detection. Our results revealed five subtypes that differed remarkably in their biomarkers, cognitive status, and some other clinical features. To evaluate the resultant subtypes further, a genetic association study was carried out and successfully identified potential genetic underpinnings of different AD subtypes. Our source code is available at: https://github.com/PennShenLab/AD-SIMLR.
Fair Clustering Through Fairlets
Flavio Chierichetti, Ravi Kumar, Silvio Lattanzi, Sergei Vassilvitskii
We study the question of fair clustering under the disparate impact doctrine, where each protected class must have approximately equal representation in every cluster. We formulate the fair clustering problem under both the k-center and the k-median objectives, and show that even with two protected classes the problem is challenging, as the optimum solution can violate common conventions--for instance a point may no longer be assigned to its nearest cluster center! En route we introduce the concept of fairlets, which are minimal sets that satisfy fair representation while approximately preserving the clustering objective. We show that any fair clustering problem can be decomposed into first finding good fairlets, and then using existing machinery for traditional clustering algorithms. While finding good fairlets can be NP-hard, we proceed to obtain efficient approximation algorithms based on minimum cost flow. We empirically demonstrate the price of fairness by quantifying the value of fair clustering on real-world datasets with sensitive attributes.
Independence clustering (without a matrix)
Since mutual independence is the target, pairwise similarity measurements are of no use, and thus traditional clustering algorithms are inapplicable. The distribution of the random variables in S is, in general, unknown, but a sample is available. Thus, the problem is cast in terms of time series. Two forms of sampling are considered: i.i.d. and stationary time series, with the main emphasis being on the latter, more general, case. A consistent, computationally tractable algorithm for each of the settings is proposed, and a number of fascinating open directions for further research are outlined.
Sparse Embedded $k$-Means Clustering
Weiwei Liu, Xiaobo Shen, Ivor Tsang
The k-means clustering algorithm is a ubiquitous tool in data mining and machine learning that shows promising performance. However, its high computational cost has hindered its applications in broad domains. Researchers have successfully addressed these obstacles with dimensionality reduction methods. Recently, [1] develop a state-of-the-art random projection (RP) method for faster k-means clustering. Their method delivers many improvements over other dimensionality reduction methods.
Affinity Clustering: Hierarchical Clustering at Scale
Mohammadhossein Bateni, Soheil Behnezhad, Mahsa Derakhshan, MohammadTaghi Hajiaghayi, Raimondas Kiveris, Silvio Lattanzi, Vahab Mirrokni
Graph clustering is a fundamental task in many data-mining and machine-learning pipelines. In particular, identifying a good hierarchical structure is at the same time a fundamental and challenging problem for several applications. The amount of data to analyze is increasing at an astonishing rate each day. Hence there is a need for new solutions to efficiently compute effective hierarchical clusterings on such huge data. The main focus of this paper is on minimum spanning tree (MST) based clusterings. In particular, we propose affinity, a novel hierarchical clustering based on Borůvka's MST algorithm. We prove certain theoretical guarantees for affinity (as well as some other classic algorithms) and show that in practice it is superior to several other state-of-the-art clustering algorithms.