Clustering
Adaptive Clustering through Semidefinite Programming
We analyze the clustering problem through a flexible probabilistic model that aims to identify an optimal partition on the sample X1,...,Xn. We perform exact clustering with high probability using a convex semidefinite estimator that interprets as a corrected, relaxed version of K-means. The estimator is analyzed through a non-asymptotic framework and showed to be optimal or near-optimal in recovering the partition. Furthermore, its performances are shown to be adaptive to the problem's effective dimension, as well as to K the unknown number of groups in this partition. We illustrate the method's performances in comparison to other classical clustering algorithms with numerical experiments on simulated high-dimensional data.
Independence clustering (without a matrix)
The independence clustering problem is considered in the following formulation: given a set $S$ of random variables, it is required to find the finest partitioning $\{U_1,\dots,U_k\}$ of $S$ into clusters such that the clusters $U_1,\dots,U_k$ are mutually independent. Since mutual independence is the target, pairwise similarity measurements are of no use, and thus traditional clustering algorithms are inapplicable. The distribution of the random variables in $S$ is, in general, unknown, but a sample is available. Thus, the problem is cast in terms of time series. Two forms of sampling are considered: i.i.d.\ and stationary time series, with the main emphasis being on the latter, more general, case. A consistent, computationally tractable algorithm for each of the settings is proposed, and a number of fascinating open directions for further research are outlined.
Affinity Clustering: Hierarchical Clustering at Scale
Graph clustering is a fundamental task in many data-mining and machine-learning pipelines. In particular, identifying a good hierarchical structure is at the same time a fundamental and challenging problem for several applications. The amount of data to analyze is increasing at an astonishing rate each day. Hence there is a need for new solutions to efficiently compute effective hierarchical clusterings on such huge data. The main focus of this paper is on minimum spanning tree (MST) based clusterings. In particular, we propose affinity, a novel hierarchical clustering based on Boruvka's MST algorithm. We prove certain theoretical guarantees for affinity (as well as some other classic algorithms) and show that in practice it is superior to several other state-of-the-art clustering algorithms.
Learning A Structured Optimal Bipartite Graph for Co-Clustering
Co-clustering methods have been widely applied to document clustering and gene expression analysis. These methods make use of the duality between features and samples such that the co-occurring structure of sample and feature clusters can be extracted. In graph based co-clustering methods, a bipartite graph is constructed to depict the relation between features and samples. Most existing co-clustering methods conduct clustering on the graph achieved from the original data matrix, which doesn't have explicit cluster structure, thus they require a post-processing step to obtain the clustering results. In this paper, we propose a novel co-clustering method to learn a bipartite graph with exactly k connected components, where k is the number of clusters. The new bipartite graph learned in our model approximates the original graph but maintains an explicit cluster structure, from which we can immediately get the clustering results without post-processing. Extensive empirical results are presented to verify the effectiveness and robustness of our model.
Graphons, mergeons, and so on!
In this work we develop a theory of hierarchical clustering for graphs. Our modelling assumption is that graphs are sampled from a graphon, which is a powerful and general model for generating graphs and analyzing large networks. Graphons are a far richer class of graph models than stochastic blockmodels, the primary setting for recent progress in the statistical theory of graph clustering. We define what it means for an algorithm to produce the ``correct clustering, give sufficient conditions in which a method is statistically consistent, and provide an explicit algorithm satisfying these properties.
Clustering with Same-Cluster Queries
We propose a framework for Semi-Supervised Active Clustering framework (SSAC), where the learner is allowed to interact with a domain expert, asking whether two given instances belong to the same cluster or not. We study the query and computational complexity of clustering in this framework. We consider a setting where the expert conforms to a center-based clustering with a notion of margin. We show that there is a trade off between computational complexity and query complexity; We prove that for the case of $k$-means clustering (i.e., when the expert conforms to a solution of $k$-means), having access to relatively few such queries allows efficient solutions to otherwise NP hard problems. In particular, we provide a probabilistic polynomial-time (BPP) algorithm for clustering in this setting that asks $O\big(k^2\log k + k\log n)$ same-cluster queries and runs with time complexity $O\big(kn\log n)$ (where $k$ is the number of clusters and $n$ is the number of instances). The success of the algorithm is guaranteed for data satisfying the margin condition under which, without queries, we show that the problem is NP hard. We also prove a lower bound on the number of queries needed to have a computationally efficient clustering algorithm in this setting.
Community Detection on Evolving Graphs
Clustering is a fundamental step in many information-retrieval and data-mining applications. Detecting clusters in graphs is also a key tool for finding the community structure in social and behavioral networks. In many of these applications, the input graph evolves over time in a continual and decentralized manner, and, to maintain a good clustering, the clustering algorithm needs to repeatedly probe the graph. Furthermore, there are often limitations on the frequency of such probes, either imposed explicitly by the online platform (e.g., in the case of crawling proprietary social networks like twitter) or implicitly because of resource limitations (e.g., in the case of crawling the web). In this paper, we study a model of clustering on evolving graphs that captures this aspect of the problem. Our model is based on the classical stochastic block model, which has been used to assess rigorously the quality of various static clustering methods. In our model, the algorithm is supposed to reconstruct the planted clustering, given the ability to query for small pieces of local information about the graph, at a limited rate. We design and analyze clustering algorithms that work in this model, and show asymptotically tight upper and lower bounds on their accuracy. Finally, we perform simulations, which demonstrate that our main asymptotic results hold true also in practice.
Estimating Staged Event Tree Models via Hierarchical Clustering on the Simplex
Shoaib, Muhammad, Riccomagno, Eva, Leonelli, Manuele, Varando, Gherardo
Staged tree models enhance Bayesian networks by incorporating context-specific dependencies through a stage-based structure. In this study, we present a new framework for estimating staged trees using hierarchical clustering on the probability simplex, utilizing simplex basesd divergences. We conduct a thorough evaluation of several distance and divergence metrics including Total Variation, Hellinger, Fisher, and Kaniadakis; alongside various linkage methods such as Ward.D2, average, complete, and McQuitty. We conducted the simulation experiments that reveals Total Variation, especially when combined with Ward.D2 linkage, consistently produces staged trees with better model fit, structure recovery, and computational efficiency. We assess performance by utilizing relative Bayesian Information Criterion (BIC), and Hamming distance. Our findings indicate that although Backward Hill Climbing (BHC) delivers competitive outcomes, it incurs a significantly higher computational cost. On the other, Total Variation divergence with Ward.D2 linkage, achieves similar performance while providing significantly better computational efficiency, making it a more viable option for large-scale or time sensitive tasks.
Semi-crowdsourced Clustering with Deep Generative Models
We consider the semi-supervised clustering problem where crowdsourcing provides noisy information about the pairwise comparisons on a small subset of data, i.e., whether a sample pair is in the same cluster. We propose a new approach that includes a deep generative model (DGM) to characterize low-level features of the data, and a statistical relational model for noisy pairwise annotations on its subset. The two parts share the latent variables. To make the model automatically trade-off between its complexity and fitting data, we also develop its fully Bayesian variant. The challenge of inference is addressed by fast (natural-gradient) stochastic variational inference algorithms, where we effectively combine variational message passing for the relational part and amortized learning of the DGM under a unified framework. Empirical results on synthetic and real-world datasets show that our model outperforms previous crowdsourced clustering methods.
Data-Driven Clustering via Parameterized Lloyd's Families
Algorithms for clustering points in metric spaces is a long-studied area of research. Clustering has seen a multitude of work both theoretically, in understanding the approximation guarantees possible for many objective functions such as k-median and k-means clustering, and experimentally, in finding the fastest algorithms and seeding procedures for Lloyd's algorithm. The performance of a given clustering algorithm depends on the specific application at hand, and this may not be known up front. For example, a typical instance may vary depending on the application, and different clustering heuristics perform differently depending on the instance. In this paper, we define an infinite family of algorithms generalizing Lloyd's algorithm, with one parameter controlling the the initialization procedure, and another parameter controlling the local search procedure. This family of algorithms includes the celebrated k-means++ algorithm, as well as the classic farthest-first traversal algorithm. We design efficient learning algorithms which receive samples from an application-specific distribution over clustering instances and learn a near-optimal clustering algorithm from the class. We show the best parameters vary significantly across datasets such as MNIST, CIFAR, and mixtures of Gaussians. Our learned algorithms never perform worse than k-means++, and on some datasets we see significant improvements.