This work invokes the notion of $f$-divergence to introduce a novel upper bound on the Bayes error rate of a general classification task. We show that the proposed bound can be computed by sampling from the output of a parameterized model. Using this practical interpretation, we introduce the Bayes optimal learning threshold (BOLT) loss whose minimization enforces a classification model to achieve the Bayes error rate. We validate the proposed loss for image and text classification tasks, considering MNIST, Fashion-MNIST, CIFAR-10, and IMDb datasets. Numerical experiments demonstrate that models trained with BOLT achieve performance on par with or exceeding that of cross-entropy, particularly on challenging datasets. This highlights the potential of BOLT in improving generalization.

Understanding how molecular changes caused by genetic variation drive disease risk is crucial for deciphering disease mechanisms. However, interpreting genome sequences is challenging because of the vast size of the human genome, and because its consequences manifest across a wide range of cells, tissues and scales -- spanning from molecular to whole organism level. Here, we present Phenformer, a multi-scale genetic language model that learns to generate mechanistic hypotheses as to how differences in genome sequence lead to disease-relevant changes in expression across cell types and tissues directly from DNA sequences of up to 88 million base pairs. Using whole genome sequencing data from more than 150 000 individuals, we show that Phenformer generates mechanistic hypotheses about disease-relevant cell and tissue types that match literature better than existing state-of-the-art methods, while using only sequence data. Furthermore, disease risk predictors enriched by Phenformer show improved prediction performance and generalisation to diverse populations. Accurate multi-megabase scale interpretation of whole genomes without additional experimental data enables both a deeper understanding of molecular mechanisms involved in disease and improved disease risk prediction at the level of individuals.

Electrochemistry workflows utilize various instruments and computing systems to execute workflows consisting of electrocatalyst synthesis, testing and evaluation tasks. The heterogeneity of the software and hardware of these ecosystems makes it challenging to orchestrate a complete workflow from production to characterization by automating its tasks. We propose an autonomous electrochemistry computing platform for a multi-site ecosystem that provides the services for remote experiment steering, real-time measurement transfer, and AI/ML-driven analytics. We describe the integration of a mobile robot and synthesis workstation into the ecosystem by developing custom hub-networks and software modules to support remote operations over the ecosystem's wireless and wired networks. We describe a workflow task for generating I-V voltammetry measurements using a potentiostat, and a machine learning framework to ensure their normality by detecting abnormal conditions such as disconnected electrodes. We study a number of machine learning methods for the underlying detection problem, including smooth, non-smooth, structural and statistical methods, and their fusers. We present experimental results to illustrate the effectiveness of this platform, and also validate the proposed ML method by deriving its rigorous generalization equations.

Foundation models require fine-tuning to ensure their generative outputs align with intended results for specific tasks. Automating this fine-tuning process is challenging, as it typically needs human feedback that can be expensive to acquire. We present AutoRefine, a method that leverages reinforcement learning for targeted fine-tuning, utilizing direct feedback from measurable performance improvements in specific downstream tasks. We demonstrate the method for a problem arising in algorithmic hiring platforms where linguistic biases influence a recommendation system. In this setting, a generative model seeks to rewrite given job specifications to receive more diverse candidate matches from a recommendation engine which matches jobs to candidates. Our model detects and regulates biases in job descriptions to meet diversity and fairness criteria. The experiments on a public hiring dataset and a real-world hiring platform showcase how large language models can assist in identifying and mitigation biases in the real world.

Systemic lupus erythematosus (SLE) is a complex heterogeneous disease with many manifestational facets. We propose a data-driven approach to discover probabilistic independent sources from multimodal imperfect EHR data. These sources represent exogenous variables in the data generation process causal graph that estimate latent root causes of the presence of SLE in the health record. We objectively evaluated the sources against the original variables from which they were discovered by training supervised models to discriminate SLE from negative health records using a reduced set of labelled instances. We found 19 predictive sources with high clinical validity and whose EHR signatures define independent factors of SLE heterogeneity. Using the sources as input patient data representation enables models to provide with rich explanations that better capture the clinical reasons why a particular record is (not) an SLE case. Providers may be willing to trade patient-level interpretability for discrimination especially in challenging cases. Introduction Systemic lupus erythematosus (SLE) is a complex relapsing disease that manifests through various combinations of symptoms and clinical signs. SLE's heterogeneity makes its recognition in the health record slow and subjective.

CNN-SVM hybrid model in deep learning is one of the cutting edge ways to detect lung cancer early. In order to get D. Model Training better results, lung cancer needs to be detected as early as There exist multiple stages integral to the process of model possible.

Supervised machine learning methods rely on tagged training data [1]. The more tagged training data that is available, the more accurately the model can learn to recognize patterns and generalize to unseen data. Crowdsourcing and Human-Based Computation (HBC) has become an increasingly popular approach for acquiring training labels in machine learning classification tasks, as it can be a cost-effective way to share the labeling effort among a large number of annotators. This approach can be particularly useful in cases where expert labeling is expensive or not feasible, or where a large amount of labeled data is needed to train a machine learning model [2]. There exist various tactics for human users to contribute their problem-solving skills [3]: Altruistic contribution: This strategy involves appealing to the altruistic nature of individuals willing to contribute their time and skills to solve problems for the common good [4-6]. Gamification: This strategy involves creating engaging and fun video games incorporating problem-solving tasks [7-9].

Large Language Models (LLMs) excel at tasks like language processing, strategy games, and reasoning but struggle to build generalizable internal representations essential for adaptive decision-making in agents. For agents to effectively navigate complex environments, they must construct reliable world models. While LLMs perform well on specific benchmarks, they often fail to generalize, leading to brittle representations that limit their real-world effectiveness. Understanding how LLMs build internal world models is key to developing agents capable of consistent, adaptive behavior across tasks. We analyze OthelloGPT, a GPT-based model trained on Othello gameplay, as a controlled testbed for studying representation learning. Despite being trained solely on next-token prediction with random valid moves, OthelloGPT shows meaningful layer-wise progression in understanding board state and gameplay. Early layers capture static attributes like board edges, while deeper layers reflect dynamic tile changes. To interpret these representations, we compare Sparse Autoencoders (SAEs) with linear probes, finding that SAEs offer more robust, disentangled insights into compositional features, whereas linear probes mainly detect features useful for classification. We use SAEs to decode features related to tile color and tile stability, a previously unexamined feature that reflects complex gameplay concepts like board control and long-term planning. We study the progression of linear probe accuracy and tile color using both SAE's and linear probes to compare their effectiveness at capturing what the model is learning. Although we begin with a smaller language model, OthelloGPT, this study establishes a framework for understanding the internal representations learned by GPT models, transformers, and LLMs more broadly. Our code is publicly available: https://github.com/ALT-JS/OthelloSAE.

In the current development of large language models (LLMs), it is important to ensure the accuracy and reliability of the underlying data sources. LLMs are critical for various applications, but they often suffer from hallucinations and inaccuracies due to knowledge gaps in the training data. Knowledge graphs (KGs), as a powerful structural tool, could serve as a vital external information source to mitigate the aforementioned issues. By providing a structured and comprehensive understanding of real-world data, KGs enhance the performance and reliability of LLMs. However, it is common that errors exist in KGs while extracting triplets from unstructured data to construct KGs. This could lead to degraded performance in downstream tasks such as question-answering and recommender systems. Therefore, anomaly detection in KGs is essential to identify and correct these errors. This paper presents an anomaly detection algorithm in knowledge graphs with dual-channel learning (ADKGD). ADKGD leverages a dual-channel learning approach to enhance representation learning from both the entity-view and triplet-view perspectives. Furthermore, using a cross-layer approach, our framework integrates internal information aggregation and context information aggregation. We introduce a kullback-leibler (KL)-loss component to improve the accuracy of the scoring function between the dual channels. To evaluate ADKGD's performance, we conduct empirical studies on three real-world KGs: WN18RR, FB15K, and NELL-995. Experimental results demonstrate that ADKGD outperforms the state-of-the-art anomaly detection algorithms. The source code and datasets are publicly available at https://github.com/csjywu1/ADKGD.

Purpose: Diabetic retinopathy (DR) is a major cause of vision loss, particularly in India, where access to retina specialists is limited in rural areas. This study aims to evaluate the Artificial Intelligence-based Diabetic Retinopathy Screening System (AIDRSS) for DR detection and prevalence assessment, addressing the growing need for scalable, automated screening solutions in resource-limited settings. Approach: A multicentric, cross-sectional study was conducted in Kolkata, India, involving 5,029 participants and 10,058 macula-centric retinal fundus images. The AIDRSS employed a deep learning algorithm with 50 million trainable parameters, integrated with Contrast Limited Adaptive Histogram Equalization (CLAHE) preprocessing for enhanced image quality. DR was graded using the International Clinical Diabetic Retinopathy (ICDR) Scale, categorizing disease into five stages (DR0 to DR4). Statistical metrics including sensitivity, specificity, and prevalence rates were evaluated against expert retina specialist assessments. Results: The prevalence of DR in the general population was 13.7%, rising to 38.2% among individuals with elevated random blood glucose levels. The AIDRSS achieved an overall sensitivity of 92%, specificity of 88%, and 100% sensitivity for detecting referable DR (DR3 and DR4). These results demonstrate the system's robust performance in accurately identifying and grading DR in a diverse population. Conclusions: AIDRSS provides a reliable, scalable solution for early DR detection in resource-constrained environments. Its integration of advanced AI techniques ensures high diagnostic accuracy, with potential to significantly reduce the burden of diabetes-related vision loss in underserved regions.