Performance Analysis
A Computational Account Of Self-Supervised Visual Learning From Egocentric Object Play
Sanyal, Deepayan, Michelson, Joel, Yang, Yuan, Ainooson, James, Kunda, Maithilee
Research in child development has shown that embodied experience handling physical objects contributes to many cognitive abilities, including visual learning. One characteristic of such experience is that the learner sees the same object from several different viewpoints. In this paper, we study how learning signals that equate different viewpoints -- e.g., assigning similar representations to different views of a single object -- can support robust visual learning. We use the Toybox dataset, which contains egocentric videos of humans manipulating different objects, and conduct experiments using a computer vision framework for self-supervised contrastive learning. We find that representations learned by equating different physical viewpoints of an object benefit downstream image classification accuracy. Further experiments show that this performance improvement is robust to variations in the gaps between viewpoints, and that the benefits transfer to several different image classification tasks.
Examining risks of racial biases in NLP tools for child protective services
Field, Anjalie, Coston, Amanda, Gandhi, Nupoor, Chouldechova, Alexandra, Putnam-Hornstein, Emily, Steier, David, Tsvetkov, Yulia
Although much literature has established the presence of demographic bias in natural language processing (NLP) models, most work relies on curated bias metrics that may not be reflective of real-world applications. At the same time, practitioners are increasingly using algorithmic tools in high-stakes settings, with particular recent interest in NLP. In this work, we focus on one such setting: child protective services (CPS). CPS workers often write copious free-form text notes about families they are working with, and CPS agencies are actively seeking to deploy NLP models to leverage these data. Given well-established racial bias in this setting, we investigate possible ways deployed NLP is liable to increase racial disparities. We specifically examine word statistics within notes and algorithmic fairness in risk prediction, coreference resolution, and named entity recognition (NER). We document consistent algorithmic unfairness in NER models, possible algorithmic unfairness in coreference resolution models, and little evidence of exacerbated racial bias in risk prediction. While there is existing pronounced criticism of risk prediction, our results expose previously undocumented risks of racial bias in realistic information extraction systems, highlighting potential concerns in deploying them, even though they may appear more benign. Our work serves as a rare realistic examination of NLP algorithmic fairness in a potential deployed setting and a timely investigation of a specific risk associated with deploying NLP in CPS settings.
Mining Themes in Clinical Notes to Identify Phenotypes and to Predict Length of Stay in Patients admitted with Heart Failure
Agarwal, Ankita, Banerjee, Tanvi, Romine, William L., Thirunarayan, Krishnaprasad, Chen, Lingwei, Cajita, Mia
Heart failure is a syndrome which occurs when the heart is not able to pump blood and oxygen to support other organs in the body. Identifying the underlying themes in the diagnostic codes and procedure reports of patients admitted for heart failure could reveal the clinical phenotypes associated with heart failure and to group patients based on their similar characteristics which could also help in predicting patient outcomes like length of stay. These clinical phenotypes usually have a probabilistic latent structure and hence, as there has been no previous work on identifying phenotypes in clinical notes of heart failure patients using a probabilistic framework and to predict length of stay of these patients using data-driven artificial intelligence-based methods, we apply natural language processing technique, topic modeling, to identify the themes present in diagnostic codes and in procedure reports of 1,200 patients admitted for heart failure at the University of Illinois Hospital and Health Sciences System (UI Health). Topic modeling identified twelve themes each in diagnostic codes and procedure reports which revealed information about different phenotypes related to various perspectives about heart failure, to study patients' profiles and to discover new relationships among medical concepts. Each theme had a set of keywords and each clinical note was labeled with two themes - one corresponding to its diagnostic code and the other corresponding to its procedure reports along with their percentage contribution. We used these themes and their percentage contribution to predict length of stay. We found that the themes discovered in diagnostic codes and procedure reports using topic modeling together were able to predict length of stay of the patients with an accuracy of 61.1% and an Area under the Receiver Operating Characteristic Curve (ROC AUC) value of 0.828.
COVID-19 Detection from Mass Spectra of Exhaled Breath
Bellarmino, Nicolรฒ, Bozzini, Giorgio, Cantoro, Riccardo, Castelletti, Francesco, Castelluzzo, Michele, Ciricugno, Carla, Correale, Raffaele, Gasperina, Daniela Dalla, Dentali, Francesco, Poggialini, Giovanni, Salerno, Piergiorgio, Squillero, Giovanni, Taborelli, Stefano
According to the World Health Organization, the SARS-CoV-2 virus generated a global emergency between 2020 and 2023 resulting in about 7 million deaths out of more than 750 million individuals diagnosed with COVID-19. During these years, polymerase-chain-reaction and antigen testing played a prominent role in disease control. In this study, we propose a fast and non-invasive detection system exploiting a proprietary mass spectrometer to measure ions in exhaled breath. We demonstrated that infected individuals, even if asymptomatic, exhibit characteristics in the air expelled from the lungs that can be detected by a nanotech-based technology and then recognized by soft-computing algorithms. A clinical trial was ran on about 300 patients: the mass spectra in the 10-351 mass-to-charge range were measured, suitably pre-processed, and analyzed by different classification models; eventually, the system shown an accuracy of 95% and a recall of 94% in identifying cases of COVID-19. With performances comparable to traditional methodologies, the proposed system could play a significant role in both routine examination for common diseases and emergency response for new epidemics.
Cooperative Thresholded Lasso for Sparse Linear Bandit
Barghi, Haniyeh, Cheng, Xiaotong, Maghsudi, Setareh
We present a novel approach to address the multi-agent sparse contextual linear bandit problem, in which the feature vectors have a high dimension $d$ whereas the reward function depends on only a limited set of features - precisely $s_0 \ll d$. Furthermore, the learning follows under information-sharing constraints. The proposed method employs Lasso regression for dimension reduction, allowing each agent to independently estimate an approximate set of main dimensions and share that information with others depending on the network's structure. The information is then aggregated through a specific process and shared with all agents. Each agent then resolves the problem with ridge regression focusing solely on the extracted dimensions. We represent algorithms for both a star-shaped network and a peer-to-peer network. The approaches effectively reduce communication costs while ensuring minimal cumulative regret per agent. Theoretically, we show that our proposed methods have a regret bound of order $\mathcal{O}(s_0 \log d + s_0 \sqrt{T})$ with high probability, where $T$ is the time horizon. To our best knowledge, it is the first algorithm that tackles row-wise distributed data in sparse linear bandits, achieving comparable performance compared to the state-of-the-art single and multi-agent methods. Besides, it is widely applicable to high-dimensional multi-agent problems where efficient feature extraction is critical for minimizing regret. To validate the effectiveness of our approach, we present experimental results on both synthetic and real-world datasets.
FERN: Leveraging Graph Attention Networks for Failure Evaluation and Robust Network Design
Liu, Chenyi, Aggarwal, Vaneet, Lan, Tian, Geng, Nan, Yang, Yuan, Xu, Mingwei, Li, Qing
Robust network design, which aims to guarantee network availability under various failure scenarios while optimizing performance/cost objectives, has received significant attention. Existing approaches often rely on model-based mixed-integer optimization that is hard to scale or employ deep learning to solve specific engineering problems yet with limited generalizability. In this paper, we show that failure evaluation provides a common kernel to improve the tractability and scalability of existing solutions. By providing a neural network function approximation of this common kernel using graph attention networks, we develop a unified learning-based framework, FERN, for scalable Failure Evaluation and Robust Network design. FERN represents rich problem inputs as a graph and captures both local and global views by attentively performing feature extraction from the graph. It enables a broad range of robust network design problems, including robust network validation, network upgrade optimization, and fault-tolerant traffic engineering that are discussed in this paper, to be recasted with respect to the common kernel and thus computed efficiently using neural networks and over a small set of critical failure scenarios. Extensive experiments on real-world network topologies show that FERN can efficiently and accurately identify key failure scenarios for both OSPF and optimal routing scheme, and generalizes well to different topologies and input traffic patterns. It can speed up multiple robust network design problems by more than 80x, 200x, 10x, respectively with negligible performance gap.
Sensitivity of Slot-Based Object-Centric Models to their Number of Slots
Zimmermann, Roland S., van Steenkiste, Sjoerd, Sajjadi, Mehdi S. M., Kipf, Thomas, Greff, Klaus
Self-supervised methods for learning object-centric representations have recently been applied successfully to various datasets. This progress is largely fueled by slot-based methods, whose ability to cluster visual scenes into meaningful objects holds great promise for compositional generalization and downstream learning. In these methods, the number of slots (clusters) $K$ is typically chosen to match the number of ground-truth objects in the data, even though this quantity is unknown in real-world settings. Indeed, the sensitivity of slot-based methods to $K$, and how this affects their learned correspondence to objects in the data has largely been ignored in the literature. In this work, we address this issue through a systematic study of slot-based methods. We propose using analogs to precision and recall based on the Adjusted Rand Index to accurately quantify model behavior over a large range of $K$. We find that, especially during training, incorrect choices of $K$ do not yield the desired object decomposition and, in fact, cause substantial oversegmentation or merging of separate objects (undersegmentation). We demonstrate that the choice of the objective function and incorporating instance-level annotations can moderately mitigate this behavior while still falling short of fully resolving this issue. Indeed, we show how this issue persists across multiple methods and datasets and stress its importance for future slot-based models.
Applications of Machine Learning in Chemical and Biological Oceanography
Sadaiappan, Balamurugan, Balakrishnan, Preethiya, CR, Vishal, Vijayan, Neethu T, Subramanian, Mahendran, Gauns, Mangesh U
Machine learning (ML) refers to computer algorithms that predict a meaningful output or categorize complex systems based on a large amount of data. ML is applied in various areas including natural science, engineering, space exploration, and even gaming development. This review focuses on the use of machine learning in the field of chemical and biological oceanography. In the prediction of global fixed nitrogen levels, partial carbon dioxide pressure, and other chemical properties, the application of ML is a promising tool. Machine learning is also utilized in the field of biological oceanography to detect planktonic forms from various images (i.e., microscopy, FlowCAM, and video recorders), spectrometers, and other signal processing techniques. Moreover, ML successfully classified the mammals using their acoustics, detecting endangered mammalian and fish species in a specific environment. Most importantly, using environmental data, the ML proved to be an effective method for predicting hypoxic conditions and harmful algal bloom events, an essential measurement in terms of environmental monitoring. Furthermore, machine learning was used to construct a number of databases for various species that will be useful to other researchers, and the creation of new algorithms will help the marine research community better comprehend the chemistry and biology of the ocean.
PaLI-X: On Scaling up a Multilingual Vision and Language Model
Chen, Xi, Djolonga, Josip, Padlewski, Piotr, Mustafa, Basil, Changpinyo, Soravit, Wu, Jialin, Ruiz, Carlos Riquelme, Goodman, Sebastian, Wang, Xiao, Tay, Yi, Shakeri, Siamak, Dehghani, Mostafa, Salz, Daniel, Lucic, Mario, Tschannen, Michael, Nagrani, Arsha, Hu, Hexiang, Joshi, Mandar, Pang, Bo, Montgomery, Ceslee, Pietrzyk, Paulina, Ritter, Marvin, Piergiovanni, AJ, Minderer, Matthias, Pavetic, Filip, Waters, Austin, Li, Gang, Alabdulmohsin, Ibrahim, Beyer, Lucas, Amelot, Julien, Lee, Kenton, Steiner, Andreas Peter, Li, Yang, Keysers, Daniel, Arnab, Anurag, Xu, Yuanzhong, Rong, Keran, Kolesnikov, Alexander, Seyedhosseini, Mojtaba, Angelova, Anelia, Zhai, Xiaohua, Houlsby, Neil, Soricut, Radu
We present the training recipe and results of scaling up PaLI-X, a multilingual vision and language model, both in terms of size of the components and the breadth of its training task mixture. Our model achieves new levels of performance on a wide-range of varied and complex tasks, including multiple image-based captioning and question-answering tasks, image-based document understanding and few-shot (in-context) learning, as well as object detection, video question answering, and video captioning. PaLI-X advances the state-of-the-art on most vision-and-language benchmarks considered (25+ of them). Finally, we observe emerging capabilities, such as complex counting and multilingual object detection, tasks that are not explicitly in the training mix.
A Transfer Learning and Explainable Solution to Detect mpox from Smartphones images
Campana, Mattia Giovanni, Colussi, Marco, Delmastro, Franca, Mascetti, Sergio, Pagani, Elena
In recent months, the monkeypox (mpox) virus -- previously endemic in a limited area of the world -- has started spreading in multiple countries until being declared a ``public health emergency of international concern'' by the World Health Organization. The alert was renewed in February 2023 due to a persisting sustained incidence of the virus in several countries and worries about possible new outbreaks. Low-income countries with inadequate infrastructures for vaccine and testing administration are particularly at risk. A symptom of mpox infection is the appearance of skin rashes and eruptions, which can drive people to seek medical advice. A technology that might help perform a preliminary screening based on the aspect of skin lesions is the use of Machine Learning for image classification. However, to make this technology suitable on a large scale, it should be usable directly on mobile devices of people, with a possible notification to a remote medical expert. In this work, we investigate the adoption of Deep Learning to detect mpox from skin lesion images. The proposal leverages Transfer Learning to cope with the scarce availability of mpox image datasets. As a first step, a homogenous, unpolluted, dataset is produced by manual selection and preprocessing of available image data. It will also be released publicly to researchers in the field. Then, a thorough comparison is conducted amongst several Convolutional Neural Networks, based on a 10-fold stratified cross-validation. The best models are then optimized through quantization for use on mobile devices; measures of classification quality, memory footprint, and processing times validate the feasibility of our proposal. Additionally, the use of eXplainable AI is investigated as a suitable instrument to both technically and clinically validate classification outcomes.