For anticipating critical transitions in complex dynamical systems, the recent approach of parameter-driven reservoir computing requires explicit knowledge of the bifurcation parameter. We articulate a framework combining a variational autoencoder (VAE) and reservoir computing to address this challenge. In particular, the driving factor is detected from time series using the VAE in an unsupervised-learning fashion and the extracted information is then used as the parameter input to the reservoir computer for anticipating the critical transition. We demonstrate the power of the unsupervised learning scheme using prototypical dynamical systems including the spatiotemporal Kuramoto-Sivashinsky system. The scheme can also be extended to scenarios where the target system is driven by several independent parameters or with partial state observations.

ORACLE is a recurrent neural network with Gated Recurrent Units (GRUs), and has been trained using a custom hierarchical cross-entropy loss function to provide high-confidence classifications along an observationally-driven taxonomy with as little as a single photometric observation. Contextual information for each object, including host galaxy photometric redshift, offset, ellipticity and brightness, is concatenated to the light curve embedding and used to make a final prediction. Training on 0.5M events from the Extended LSST Astronomical Time-Series Classification Challenge, we achieve a top-level (Transient vs Variable) macro-averaged precision of 0.96 using only 1 day of photometric observations after the first detection in addition to contextual information, for each event; this increases to >0.99 once 64 days of the light curve has been obtained, and 0.83 at 1024 days after first detection for 19-way classification (including supernova sub-types, active galactic nuclei, variable stars, microlensing events, and kilonovae). We also compare ORACLE with other state-of-the-art classifiers and report comparable performance for the 19-way classification task, in addition to delivering accurate top-level classifications much earlier. The code and model weights used in this work are publicly available at our associated GitHub repository.

Artificial Intelligence (AI)-native receivers prove significant performance improvement in high noise regimes and can potentially reduce communication overhead compared to the traditional receiver. However, their performance highly depends on the representativeness of the training dataset. A major issue is the uncertainty of whether the training dataset covers all test environments and waveform configurations, and thus, whether the trained model is robust in practical deployment conditions. To this end, we propose a joint measurement-recovery framework for AI-native transceivers post deployment, called VERITAS, that continuously looks for distribution shifts in the received signals and triggers finite re-training spurts. VERITAS monitors the wireless channel using 5G pilots fed to an auxiliary neural network that detects out-of-distribution channel profile, transmitter speed, and delay spread. As soon as such a change is detected, a traditional (reference) receiver is activated, which runs for a period of time in parallel to the AI-native receiver. Finally, VERTIAS compares the bit probabilities of the AI-native and the reference receivers for the same received data inputs, and decides whether or not a retraining process needs to be initiated. Our evaluations reveal that VERITAS can detect changes in the channel profile, transmitter speed, and delay spread with 99%, 97%, and 69% accuracies, respectively, followed by timely initiation of retraining for 86%, 93.3%, and 94.8% of inputs in channel profile, transmitter speed, and delay spread test sets, respectively.

In this work, we propose and evaluate the feasibility of a two-stage pipeline to evaluate literary machine translation, in a fine-grained manner, from English to Korean. The results show that our framework provides fine-grained, interpretable metrics suited for literary translation and obtains a higher correlation with human judgment than traditional machine translation metrics. Nonetheless, it still fails to match interhuman agreement, especially in metrics like Korean Honorifics. We also observe that LLMs tend to favor translations generated by other LLMs, and we highlight the necessity of developing more sophisticated evaluation methods to ensure accurate and culturally sensitive machine translation of literary works. Figure 1: The overview of our proposed framework: we evaluate translation of literary works in two stages.

Identifying druggable genes is essential for developing effective pharmaceuticals. With the availability of extensive, high-quality data, computational methods have become a significant asset. Protein Interaction Network (PIN) is valuable but challenging to implement due to its high dimensionality and sparsity. Previous methods relied on indirect integration, leading to resolution loss. This study proposes GAN-TAT, a framework utilizing an advanced graph embedding technology, ImGAGN, to directly integrate PIN for druggable gene inference work. Tested on three Pharos datasets, GAN-TAT achieved the highest AUC-ROC score of 0.951 on Tclin. Further evaluation shows that GAN-TAT's predictions are supported by clinical evidence, highlighting its potential practical applications in pharmacogenomics. This research represents a methodological attempt with the direct utilization of PIN, expanding potential new solutions for developing drug targets.

Despite the progress made in deepfake detection research, recent studies have shown that biases in the training data for these detectors can result in varying levels of performance across different demographic groups, such as race and gender. These disparities can lead to certain groups being unfairly targeted or excluded. Traditional methods often rely on fair loss functions to address these issues, but they under-perform when applied to unseen datasets, hence, fairness generalization remains a challenge. In this work, we propose a data-driven framework for tackling the fairness generalization problem in deepfake detection by leveraging synthetic datasets and model optimization. Our approach focuses on generating and utilizing synthetic data to enhance fairness across diverse demographic groups. By creating a diverse set of synthetic samples that represent various demographic groups, we ensure that our model is trained on a balanced and representative dataset. This approach allows us to generalize fairness more effectively across different domains. We employ a comprehensive strategy that leverages synthetic data, a loss sharpness-aware optimization pipeline, and a multi-task learning framework to create a more equitable training environment, which helps maintain fairness across both intra-dataset and cross-dataset evaluations. Extensive experiments on benchmark deepfake detection datasets demonstrate the efficacy of our approach, surpassing state-of-the-art approaches in preserving fairness during cross-dataset evaluation. Our results highlight the potential of synthetic datasets in achieving fairness generalization, providing a robust solution for the challenges faced in deepfake detection.

This article considers the impact of different thresholding methods to the Nearest Shrunken Centroid algorithm, which is popularly referred as the Prediction Analysis of Microarrays (PAM) for high-dimensional classification. PAM uses soft thresholding to achieve high computational efficiency and high classification accuracy but in the price of retaining too many features. When applied to microarray human cancers, PAM selected 2611 features on average from 10 multi-class datasets. Such a large number of features make it difficult to perform follow up study. One reason behind this problem is the soft thresholding, which is known to produce biased parameter estimate in regression analysis. In this article, we extend the PAM algorithm with two other thresholding methods, hard and order thresholding, and a deep search algorithm to achieve better thresholding parameter estimate. The modified algorithms are extensively tested and compared to the original one based on real data and Monte Carlo studies. In general, the modification not only gave better cancer status prediction accuracy, but also resulted in more parsimonious models with significantly smaller number of features.

Host-response-based diagnostics can improve the accuracy of diagnosing bacterial and viral infections, thereby reducing inappropriate antibiotic prescriptions. However, the existing cohorts with limited sample size and coarse infections types are unable to support the exploration of an accurate and generalizable diagnostic model. Here, we curate the largest infection host-response transcriptome data, including 11,247 samples across 89 blood transcriptome datasets from 13 countries and 21 platforms. We build a diagnostic model for pathogen prediction starting from a pan-infection model as foundation (AUC = 0.97) based on the pan-infection dataset. Then, we utilize knowledge distillation to efficiently transfer the insights from this "teacher" model to four lightweight pathogen "student" models, i.e., staphylococcal infection (AUC = 0.99), streptococcal infection (AUC = 0.94), HIV infection (AUC = 0.93), and RSV infection (AUC = 0.94), as well as a sepsis "student" model (AUC = 0.99). The proposed knowledge distillation framework not only facilitates the diagnosis of pathogens using pan-infection data, but also enables an across-disease study from pan-infection to sepsis. Moreover, the framework enables high-degree lightweight design of diagnostic models, which is expected to be adaptively deployed in clinical settings.

In machine learning, metric elicitation refers to the selection of performance metrics that best reflect an individual's implicit preferences for a given application. Currently, metric elicitation methods only consider metrics that depend on the accuracy values encoded within a given model's confusion matrix. However, focusing solely on confusion matrices does not account for other model feasibility considerations such as varied monetary costs or latencies. In our work, we build upon the multiclass metric elicitation framework of Hiranandani et al., extrapolating their proposed Diagonal Linear Performance Metric Elicitation (DLPME) algorithm to account for additional bounded costs and rewards. Our experimental results with synthetic data demonstrate our approach's ability to quickly converge to the true metric.

This study presents a machine learning approach to predict the number of barges transported by vessels on inland waterways using tracking data from the Automatic Identification System (AIS). While AIS tracks the location of tug and tow vessels, it does not monitor the presence or number of barges transported by those vessels. Understanding the number and types of barges conveyed along river segments, between ports, and at ports is crucial for estimating the quantities of freight transported on the nation's waterways. This insight is also valuable for waterway management and infrastructure operations impacting areas such as targeted dredging operations, and data-driven resource allocation. Labeled sample data was generated using observations from traffic cameras located along key river segments and matched to AIS data records. A sample of 164 vessels representing up to 42 barge convoys per vessel was used for model development. The methodology involved first predicting barge presence and then predicting barge quantity. Features derived from the AIS data included speed measures, vessel characteristics, turning measures, and interaction terms. For predicting barge presence, the AdaBoost model achieved an F1 score of 0.932. For predicting barge quantity, the Random Forest combined with an AdaBoost ensemble model achieved an F1 score of 0.886. Bayesian optimization was used for hyperparameter tuning. By advancing predictive modeling for inland waterways, this study offers valuable insights for transportation planners and organizations, which require detailed knowledge of traffic volumes, including the flow of commodities, their destinations, and the tonnage moving in and out of ports.