Rare event searches allow us to search for new physics at energy scales inaccessible with other means by leveraging specialized large-mass detectors. Machine learning provides a new tool to maximize the information provided by these detectors. The information is sparse, which forces these algorithms to start from the lowest level data and exploit all symmetries in the detector to produce results. In this work we present KamNet which harnesses breakthroughs in geometric deep learning and spatiotemporal data analysis to maximize the physics reach of KamLAND-Zen, a kiloton scale spherical liquid scintillator detector searching for neutrinoless double beta decay ($0\nu\beta\beta$). Using a simplified background model for KamLAND we show that KamNet outperforms a conventional CNN on benchmarking MC simulations with an increasing level of robustness. Using simulated data, we then demonstrate KamNet's ability to increase KamLAND-Zen's sensitivity to $0\nu\beta\beta$ and $0\nu\beta\beta$ to excited states. A key component of this work is the addition of an attention mechanism to elucidate the underlying physics KamNet is using for the background rejection.

A common problem in data science is "use this function defined over this small set to generate predictions over that larger set." Extrapolation, interpolation, statistical inference and forecasting all reduce to this problem. The Kan extension is a powerful tool in category theory that generalizes this notion. In this work we explore several applications of Kan extensions to data science. We begin by deriving a simple classification algorithm as a Kan extension and experimenting with this algorithm on real data. Next, we use the Kan extension to derive a procedure for learning clustering algorithms from labels and explore the performance of this procedure on real data. We then investigate how Kan extensions can be used to learn a general mapping from datasets of labeled examples to functions and to approximate a complex function with a simpler one.

Hypoglycemia is an unpleasant phenomenon caused by low blood glucose. The disease can lead a person to death or a high level of body damage. To avoid significant damage, patients need sugar. The research aims at implementing an automatic system to detect hypoglycemia and perform automatic sugar injections to save a life. Receiving the benefits of the internet of things (IoT), the sensor data was transferred using the hypertext transfer protocol (HTTP) protocol. To ensure the safety of health-related data, blockchain technology was utilized. The glucose sensor and smartwatch data were processed via Fog and sent to the cloud. A Random Forest algorithm was proposed and utilized to decide hypoglycemic events. When the hypoglycemic event was detected, the system sent a notification to the mobile application and auto-injection device to push the condensed sugar into the victims body. XGBoost, k-nearest neighbors (KNN), support vector machine (SVM), and decision tree were implemented to compare the proposed models performance. The random forest performed 0.942 testing accuracy, better than other models in detecting hypoglycemic events. The systems performance was measured in several conditions, and satisfactory results were achieved. The system can benefit hypoglycemia patients to survive this disease.

Despite the recent advances in out-of-distribution(OOD) detection, anomaly detection, and uncertainty estimation tasks, there do not exist a task-agnostic and post-hoc approach. To address this limitation, we design a novel clustering-based ensembling method, called Task Agnostic and Post-hoc Unseen Distribution Detection (TAPUDD) that utilizes the features extracted from the model trained on a specific task. Explicitly, it comprises of TAP-Mahalanobis, which clusters the training datasets' features and determines the minimum Mahalanobis distance of the test sample from all clusters. Further, we propose the Ensembling module that aggregates the computation of iterative TAP-Mahalanobis for a different number of clusters to provide reliable and efficient cluster computation. Through extensive experiments on synthetic and real-world datasets, we observe that our approach can detect unseen samples effectively across diverse tasks and performs better or on-par with the existing baselines. To this end, we eliminate the necessity of determining the optimal value of the number of clusters and demonstrate that our method is more viable for large-scale classification tasks.

Deep neural networks for image-based screening and computer-aided diagnosis have achieved expert-level performance on various medical imaging modalities, including chest radiographs. Recently, several works have indicated that these state-of-the-art classifiers can be biased with respect to sensitive patient attributes, such as race or gender, leading to growing concerns about demographic disparities and discrimination resulting from algorithmic and model-based decision-making in healthcare. Fair machine learning has focused on mitigating such biases against disadvantaged or marginalised groups, mainly concentrating on tabular data or natural images. This work presents two novel intra-processing techniques based on fine-tuning and pruning an already-trained neural network. These methods are simple yet effective and can be readily applied post hoc in a setting where the protected attribute is unknown during the model development and test time. In addition, we compare several intra- and post-processing approaches applied to debiasing deep chest X-ray classifiers. To the best of our knowledge, this is one of the first efforts studying debiasing methods on chest radiographs. Our results suggest that the considered approaches successfully mitigate biases in fully connected and convolutional neural networks offering stable performance under various settings. The discussed methods can help achieve group fairness of deep medical image classifiers when deploying them in domains with different fairness considerations and constraints.

In this post, I will present how to use random forests in classification, a prediction technique consisting in generating a set of trees (hence, a forest) bootstrapping the features used in each tree. We do this to obtain trees that are not necessarily using the strongest predictors at the beginning. I will test this technique in a LoanDefaults dataset to predict which customers will default the paying of a loan in a specific month. This dataset has two interesting features: the number of positive cases is much smaller than the negatives and requires some preprocessing of the existing features. I will be using the ranger (RANdom forest GEneRator) package, skimr to get a summary of data, rpart and rpart.plot to generate an alternative decision tree model, BAdatasets to access the dataset, tidymodels for prediction workflow facilities and forcats for the variable importance plot.

Molecular property prediction is of crucial importance in many disciplines such as drug discovery, molecular biology, or material and process design. The frequently employed quantitative structure-property/activity relationships (QSPRs/QSARs) characterize molecules by descriptors which are then mapped to the properties of interest via a linear or nonlinear model. In contrast, graph neural networks, a novel machine learning method, directly work on the molecular graph, i.e., a graph representation where atoms correspond to nodes and bonds correspond to edges. GNNs allow to learn properties in an end-to-end fashion, thereby avoiding the need for informative descriptors as in QSPRs/QSARs. GNNs have been shown to achieve state-of-the-art prediction performance on various property predictions tasks and represent an active field of research. We describe the fundamentals of GNNs and demonstrate the application of GNNs via two examples for molecular property prediction.

Plasma is defined as the fourth state of matter and non-thermal plasma can be produced at atmospheric pressure under a high electrical field. The strong and broad-spectrum antimicrobial effect of plasma-activated liquids (PALs) is now well known. The proven applicability of machine learning (ML) in the medical field is encouraging for its application in the field of plasma medicine as well. Thus, ML applications on PALs could present a new perspective to better understand the influences of various parameters on their antimicrobial effects. In this paper, comparative supervised ML models are presented by using previously obtained data to qualitatively predict the in vitro antimicrobial activity of PALs. A literature search was performed and data is collected from 33 relevant articles. After the required preprocessing steps, two supervised ML methods, namely classification, and regression are applied to data to obtain microbial inactivation (MI) predictions. For classification, MI is labeled in four categories and for regression, MI is used as a continuous variable. Two different robust cross-validation strategies are conducted for classification and regression models to evaluate the proposed method; repeated stratified k-fold cross-validation and k-fold cross-validation, respectively. We also investigate the effect of different features on models. The results demonstrated that the hyperparameter-optimized Random Forest Classifier (oRFC) and Random Forest Regressor (oRFR) provided better results than other models for the classification and regression, respectively. Finally, the best test accuracy of 82.68% for oRFC and R2 of 0.75 for the oRFR are obtained. ML techniques could contribute to a better understanding of plasma parameters that have a dominant role in the desired antimicrobial effect. Furthermore, such findings may contribute to the definition of a plasma dose in the future.

Self-supervised, category-agnostic segmentation of real-world images is a challenging open problem in computer vision. Here, we show how to learn static grouping priors from motion self-supervision by building on the cognitive science concept of a Spelke Object: a set of physical stuff that moves together. We introduce the Excitatory-Inhibitory Segment Extraction Network (EISEN), which learns to extract pairwise affinity graphs for static scenes from motion-based training signals. EISEN then produces segments from affinities using a novel graph propagation and competition network. During training, objects that undergo correlated motion (such as robot arms and the objects they move) are decoupled by a bootstrapping process: EISEN explains away the motion of objects it has already learned to segment. We show that EISEN achieves a substantial improvement in the state of the art for self-supervised image segmentation on challenging synthetic and real-world robotics datasets.

Human-in-the-loop approaches are of great importance for robot applications. In the presented study, we implemented a multimodal human-robot interaction (HRI) scenario, in which a simulated robot communicates with its human partner through speech and gestures. The robot announces its intention verbally and selects the appropriate action using pointing gestures. The human partner, in turn, evaluates whether the robot's verbal announcement (intention) matches the action (pointing gesture) chosen by the robot. For cases where the verbal announcement of the robot does not match the corresponding action choice of the robot, we expect error-related potentials (ErrPs) in the human electroencephalogram (EEG). These intrinsic evaluations of robot actions by humans, evident in the EEG, were recorded in real time, continuously segmented online and classified asynchronously. For feature selection, we propose an approach that allows the combinations of forward and backward sliding windows to train a classifier. We achieved an average classification performance of 91% across 9 subjects. As expected, we also observed a relatively high variability between the subjects. In the future, the proposed feature selection approach will be extended to allow for customization of feature selection. To this end, the best combinations of forward and backward sliding windows will be automatically selected to account for inter-subject variability in classification performance. In addition, we plan to use the intrinsic human error evaluation evident in the error case by the ErrP in interactive reinforcement learning to improve multimodal human-robot interaction.