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Ontology-Driven Self-Supervision for Adverse Childhood Experiences Identification Using Social Media Datasets

arXiv.org Artificial Intelligence

Adverse Childhood Experiences (ACEs) are defined as a collection of highly stressful, and potentially traumatic, events or circumstances that occur throughout childhood and/or adolescence. They have been shown to be associated with increased risks of mental health diseases or other abnormal behaviours in later lives. However, the identification of ACEs from textual data with Natural Language Processing (NLP) is challenging because (a) there are no NLP ready ACE ontologies; (b) there are few resources available for machine learning, necessitating the data annotation from clinical experts; (c) costly annotations by domain experts and large number of documents for supporting large machine learning models. In this paper, we present an ontology-driven self-supervised approach (derive concept embeddings using an auto-encoder from baseline NLP results) for producing a publicly available resource that would support large-scale machine learning (e.g., training transformer based large language models) on social media corpus. This resource as well as the proposed approach are aimed to facilitate the community in training transferable NLP models for effectively surfacing ACEs in low-resource scenarios like NLP on clinical notes within Electronic Health Records. The resource including a list of ACE ontology terms, ACE concept embeddings and the NLP annotated corpus is available at https://github.com/knowlab/ACE-NLP.


Deeply Supervised Skin Lesions Diagnosis with Stage and Branch Attention

arXiv.org Artificial Intelligence

Accurate and unbiased examinations of skin lesions are critical for the early diagnosis and treatment of skin diseases. Visual features of skin lesions vary significantly because the images are collected from patients with different lesion colours and morphologies by using dissimilar imaging equipment. Recent studies have reported that ensembled convolutional neural networks (CNNs) are practical to classify the images for early diagnosis of skin disorders. However, the practical use of these ensembled CNNs is limited as these networks are heavyweight and inadequate for processing contextual information. Although lightweight networks (e.g., MobileNetV3 and EfficientNet) were developed to achieve parameters reduction for implementing deep neural networks on mobile devices, insufficient depth of feature representation restricts the performance. To address the existing limitations, we develop a new lite and effective neural network, namely HierAttn. The HierAttn applies a novel deep supervision strategy to learn the local and global features by using multi-stage and multi-branch attention mechanisms with only one training loss. The efficacy of HierAttn was evaluated by using the dermoscopy images dataset ISIC2019 and smartphone photos dataset PAD-UFES-20 (PAD2020). The experimental results show that HierAttn achieves the best accuracy and area under the curve (AUC) among the state-of-the-art lightweight networks. The code is available at https://github.com/anthonyweidai/HierAttn.


QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Scores and Benchmarking Results

arXiv.org Artificial Intelligence

Deep learning (DL) models have provided state-of-the-art performance in various medical imaging benchmarking challenges, including the Brain Tumor Segmentation (BraTS) challenges. However, the task of focal pathology multi-compartment segmentation (e.g., tumor and lesion sub-regions) is particularly challenging, and potential errors hinder translating DL models into clinical workflows. Quantifying the reliability of DL model predictions in the form of uncertainties could enable clinical review of the most uncertain regions, thereby building trust and paving the way toward clinical translation. Several uncertainty estimation methods have recently been introduced for DL medical image segmentation tasks. Developing scores to evaluate and compare the performance of uncertainty measures will assist the end-user in making more informed decisions. In this study, we explore and evaluate a score developed during the BraTS 2019 and BraTS 2020 task on uncertainty quantification (QU-BraTS) and designed to assess and rank uncertainty estimates for brain tumor multi-compartment segmentation. This score (1) rewards uncertainty estimates that produce high confidence in correct assertions and those that assign low confidence levels at incorrect assertions, and (2) penalizes uncertainty measures that lead to a higher percentage of under-confident correct assertions. We further benchmark the segmentation uncertainties generated by 14 independent participating teams of QU-BraTS 2020, all of which also participated in the main BraTS segmentation task. Overall, our findings confirm the importance and complementary value that uncertainty estimates provide to segmentation algorithms, highlighting the need for uncertainty quantification in medical image analyses.


Integrative conformal p-values for powerful out-of-distribution testing with labeled outliers

arXiv.org Artificial Intelligence

This paper develops novel conformal methods to test whether a new observation was sampled from the same distribution as a reference set. Blending inductive and transductive conformal inference in an innovative way, the described methods can re-weight standard conformal p-values based on dependent side information from known out-of-distribution data in a principled way, and can automatically take advantage of the most powerful model from any collection of one-class and binary classifiers. The solution can be implemented either through sample splitting or via a novel transductive cross-validation+ scheme which may also be useful in other applications of conformal inference, due to tighter guarantees compared to existing cross-validation approaches. After studying false discovery rate control and power within a multiple testing framework with several possible outliers, the proposed solution is shown to outperform standard conformal p-values through simulations as well as applications to image recognition and tabular data.


Learning to predict synchronization of coupled oscillators on randomly generated graphs

arXiv.org Artificial Intelligence

Suppose we are given a system of coupled oscillators on an unknown graph along with the trajectory of the system during some period. Can we predict whether the system will eventually synchronize? Even with a known underlying graph structure, this is an important yet analytically intractable question in general. In this work, we take an alternative approach to the synchronization prediction problem by viewing it as a classification problem based on the fact that any given system will eventually synchronize or converge to a non-synchronizing limit cycle. By only using some basic statistics of the underlying graphs such as edge density and diameter, our method can achieve perfect accuracy when there is a significant difference in the topology of the underlying graphs between the synchronizing and the non-synchronizing examples. However, in the problem setting where these graph statistics cannot distinguish the two classes very well (e.g., when the graphs are generated from the same random graph model), we find that pairing a few iterations of the initial dynamics along with the graph statistics as the input to our classification algorithms can lead to significant improvement in accuracy; far exceeding what is known by the classical oscillator theory. More surprisingly, we find that in almost all such settings, dropping out the basic graph statistics and training our algorithms with only initial dynamics achieves nearly the same accuracy. We demonstrate our method on three models of continuous and discrete coupled oscillators -- the Kuramoto model, Firefly Cellular Automata, and Greenberg-Hastings model. Finally, we also propose an "ensemble prediction" algorithm that successfully scales our method to large graphs by training on dynamics observed from multiple random subgraphs.


Covy: An AI-powered Robot with a Compound Vision System for Detecting Breaches in Social Distancing

arXiv.org Artificial Intelligence

This paper introduces a compound vision system that enables robots to localize people up to 15m away using a cheap camera. And, it proposes a robust navigation stack that combines Deep Reinforcement Learning (DRL) and a probabilistic localization method. To test the efficacy of these systems, we prototyped a low-cost mobile robot that we call Covy. Covy can be used for applications such as promoting social distancing during pandemics or estimating the density of a crowd. We evaluated Covy's performance through extensive sets of experiments both in simulated and realistic environments. Our results show that Covy's compound vision algorithm doubles the range of the used depth camera, and its hybrid navigation stack is more robust than a pure DRL-based one.


Transfer Learning Application of Self-supervised Learning in ARPES

arXiv.org Artificial Intelligence

Equal contribution *To whom correspondence should be addressed. Abstract Recent development in angle-resolved photoemission spectroscopy (ARPES) technique involves spatially resolving samples while maintaining the high-resolution feature of momentum space. This development easily expands the data size and its complexity for data analysis, where one of it is to label similar dispersion cuts and map them spatially. In this work, we demonstrate that the recent development in representational learning (self-supervised learning) model combined with k-means clustering can help automate that part of data analysis and save precious time, albeit with low performance. Finally, we introduce a few-shot learning (k-nearest neighbour or kNN) in representational space where we selectively choose one (k=1) image reference for each known label and subsequently label the rest of the data with respect to the nearest reference image. This last approach demonstrates the strength of the selfsupervised learning to automate the image analysis in ARPES in particular and can be generalized into any science data analysis that heavily involves image data.


20 Most Asked Interview Questions of Machine Learning - Analytics Vidhya

#artificialintelligence

This article was published as a part of the Data Science Blogathon. Companies are trying to disrupt the technological and business market by introducing new and smart products and techniques in society by adopting new age-technologies like Artificial intelligence and Machine learning. Each organization is searching for well-talented and experienced people who can serve them on their demands. Today data scientists, data analysts, machine learning engineers, and computer vision engineers are more in-demand organizational roles. If you wish to apply and grab a job in the tech domain, it's crucial to know common machine learning interview questions that recruiters ask. The article covers some popular machine learning interview questions that will force you to think one step ahead of your knowledge, and you will like to encounter and achieve your dream job.


Understanding the use of ROC Curves(Artificial Intelligence)

#artificialintelligence

Abstract: Likelihood ratio ordering has been identified as a reasonable assumption in the two-sample problem in many practical scenarios. With this assumption, statisticians have proposed various methods in the estimation of the distributions of subpopulations, which consequently benefit the downstream inferences, such as the ROC curve and the associated summary statistic estimation. In this paper, under the likelihood ratio ordering assumption, we first propose a Bernstein polynomial method to model the distributions of both samples; we then estimate the distributions by the maximum empirical likelihood principle. The ROC curve estimate and the associated summary statistics are obtained subsequently. We compare the performance of our method with existing methods by extensive simulation studies.


Graph-Embedded Subspace Support Vector Data Description

arXiv.org Artificial Intelligence

In this paper, we propose a novel subspace learning framework for one-class classification. The proposed framework presents the problem in the form of graph embedding. It includes the previously proposed subspace one-class techniques as its special cases and provides further insight on what these techniques actually optimize. The framework allows to incorporate other meaningful optimization goals via the graph preserving criterion and reveals a spectral solution and a spectral regression-based solution as alternatives to the previously used gradient-based technique. We combine the subspace learning framework iteratively with Support Vector Data Description applied in the subspace to formulate Graph-Embedded Subspace Support Vector Data Description. We experimentally analyzed the performance of newly proposed different variants. We demonstrate improved performance against the baselines and the recently proposed subspace learning methods for one-class classification.