Exposure to bio-aerosols such as mold spores and pollen can lead to adverse health effects. There is a need for a portable and cost-effective device for long-term monitoring and quantification of various bio-aerosols. To address this need, we present a mobile and cost-effective label-free bio-aerosol sensor that takes holographic images of flowing particulate matter concentrated by a virtual impactor, which selectively slows down and guides particles larger than ~6 microns to fly through an imaging window. The flowing particles are illuminated by a pulsed laser diode, casting their inline holograms on a CMOS image sensor in a lens-free mobile imaging device. The illumination contains three short pulses with a negligible shift of the flowing particle within one pulse, and triplicate holograms of the same particle are recorded at a single frame before it exits the imaging field-of-view, revealing different perspectives of each particle. The particles within the virtual impactor are localized through a differential detection scheme, and a deep neural network classifies the aerosol type in a label-free manner, based on the acquired holographic images. We demonstrated the success of this mobile bio-aerosol detector with a virtual impactor using different types of pollen (i.e., bermuda, elm, oak, pine, sycamore, and wheat) and achieved a blind classification accuracy of 92.91%. This mobile and cost-effective device weighs ~700 g and can be used for label-free sensing and quantification of various bio-aerosols over extended periods since it is based on a cartridge-free virtual impactor that does not capture or immobilize particulate matter.

Audio-visual source localization is a challenging task that aims to predict the location of visual sound sources in a video. Since collecting ground-truth annotations of sounding objects can be costly, a plethora of weakly-supervised localization methods that can learn from datasets with no bounding-box annotations have been proposed in recent years, by leveraging the natural co-occurrence of audio and visual signals. Despite significant interest, popular evaluation protocols have two major flaws. First, they allow for the use of a fully annotated dataset to perform early stopping, thus significantly increasing the annotation effort required for training. Second, current evaluation metrics assume the presence of sound sources at all times. This is of course an unrealistic assumption, and thus better metrics are necessary to capture the model's performance on (negative) samples with no visible sound sources. To accomplish this, we extend the test set of popular benchmarks, Flickr SoundNet and VGG-Sound Sources, in order to include negative samples, and measure performance using metrics that balance localization accuracy and recall. Using the new protocol, we conducted an extensive evaluation of prior methods, and found that most prior works are not capable of identifying negatives and suffer from significant overfitting problems (rely heavily on early stopping for best results). We also propose a new approach for visual sound source localization that addresses both these problems. In particular, we found that, through extreme visual dropout and the use of momentum encoders, the proposed approach combats overfitting effectively, and establishes a new state-of-the-art performance on both Flickr SoundNet and VGG-Sound Source. Code and pre-trained models are available at https://github.com/stoneMo/SLAVC.

We address the problem of online change detection in multivariate datastreams, and we introduce QuantTree Exponentially Weighted Moving Average (QT-EWMA), a nonparametric change-detection algorithm that can control the expected time before a false alarm, yielding a desired Average Run Length (ARL$_0$). Controlling false alarms is crucial in many applications and is rarely guaranteed by online change-detection algorithms that can monitor multivariate datastreams without knowing the data distribution. Like many change-detection algorithms, QT-EWMA builds a model of the data distribution, in our case a QuantTree histogram, from a stationary training set. To monitor datastreams even when the training set is extremely small, we propose QT-EWMA-update, which incrementally updates the QuantTree histogram during monitoring, always keeping the ARL$_0$ under control. Our experiments, performed on synthetic and real-world datastreams, demonstrate that QT-EWMA and QT-EWMA-update control the ARL$_0$ and the false alarm rate better than state-of-the-art methods operating in similar conditions, achieving lower or comparable detection delays.

The quantification of fat depots on the surroundings of the heart is an accurate procedure for evaluating health risk factors correlated with several diseases. However, this type of evaluation is not widely employed in clinical practice due to the required human workload. This work proposes a novel technique for the automatic segmentation of cardiac fat pads. The technique is based on applying classification algorithms to the segmentation of cardiac CT images. Furthermore, we extensively evaluate the performance of several algorithms on this task and discuss which provided better predictive models. Experimental results have shown that the mean accuracy for the classification of epicardial and mediastinal fats has been 98.4% with a mean true positive rate of 96.2%. On average, the Dice similarity index, regarding the segmented patients and the ground truth, was equal to 96.8%. Therfore, our technique has achieved the most accurate results for the automatic segmentation of cardiac fats, to date.

Multi-source data fusion, in which multiple data sources are jointly analyzed to obtain improved information, has considerable research attention. For the datasets of multiple medical institutions, data confidentiality and cross-institutional communication are critical. In such cases, data collaboration (DC) analysis by sharing dimensionality-reduced intermediate representations without iterative cross-institutional communications may be appropriate. Identifiability of the shared data is essential when analyzing data including personal information. In this study, the identifiability of the DC analysis is investigated. The results reveals that the shared intermediate representations are readily identifiable to the original data for supervised learning. This study then proposes a non-readily identifiable DC analysis only sharing non-readily identifiable data for multiple medical datasets including personal information. The proposed method solves identifiability concerns based on a random sample permutation, the concept of interpretable DC analysis, and usage of functions that cannot be reconstructed. In numerical experiments on medical datasets, the proposed method exhibits a non-readily identifiability while maintaining a high recognition performance of the conventional DC analysis. For a hospital dataset, the proposed method exhibits a nine percentage point improvement regarding the recognition performance over the local analysis that uses only local dataset.

Detecting anomalous regions in images is a frequently encountered problem in industrial monitoring. A relevant example is the analysis of tissues and other products that in normal conditions conform to a specific texture, while defects introduce changes in the normal pattern. We address the anomaly detection problem by training a deep autoencoder, and we show that adopting a loss function based on Complex Wavelet Structural Similarity (CW-SSIM) yields superior detection performance on this type of images compared to traditional autoencoder loss functions. Our experiments on well-known anomaly detection benchmarks show that a simple model trained with this loss function can achieve comparable or superior performance to state-of-the-art methods leveraging deeper, larger and more computationally demanding neural networks.

Objective: Disease knowledge graphs are a way to connect, organize, and access disparate information about diseases with numerous benefits for artificial intelligence (AI). To create knowledge graphs, it is necessary to extract knowledge from multimodal datasets in the form of relationships between disease concepts and normalize both concepts and relationship types. Methods: We introduce REMAP, a multimodal approach for disease relation extraction and classification. The REMAP machine learning approach jointly embeds a partial, incomplete knowledge graph and a medical language dataset into a compact latent vector space, followed by aligning the multimodal embeddings for optimal disease relation extraction. Results: We apply REMAP approach to a disease knowledge graph with 96,913 relations and a text dataset of 1.24 million sentences. On a dataset annotated by human experts, REMAP improves text-based disease relation extraction by 10.0% (accuracy) and 17.2% (F1-score) by fusing disease knowledge graphs with text information. Further, REMAP leverages text information to recommend new relationships in the knowledge graph, outperforming graph-based methods by 8.4% (accuracy) and 10.4% (F1-score). Conclusion: REMAP is a multimodal approach for extracting and classifying disease relationships by fusing structured knowledge and text information. REMAP provides a flexible neural architecture to easily find, access, and validate AI-driven relationships between disease concepts.

Recent developments for Semi-Supervised Object Detection (SSOD) have shown the promise of leveraging unlabeled data to improve an object detector. However, thus far these methods have assumed that the unlabeled data does not contain out-of-distribution (OOD) classes, which is unrealistic with larger-scale unlabeled datasets. In this paper, we consider a more practical yet challenging problem, Open-Set Semi-Supervised Object Detection (OSSOD). We first find the existing SSOD method obtains a lower performance gain in open-set conditions, and this is caused by the semantic expansion, where the distracting OOD objects are mispredicted as in-distribution pseudo-labels for the semi-supervised training. To address this problem, we consider online and offline OOD detection modules, which are integrated with SSOD methods. With the extensive studies, we found that leveraging an offline OOD detector based on a self-supervised vision transformer performs favorably against online OOD detectors due to its robustness to the interference of pseudo-labeling. In the experiment, our proposed framework effectively addresses the semantic expansion issue and shows consistent improvements on many OSSOD benchmarks, including large-scale COCO-OpenImages. We also verify the effectiveness of our framework under different OSSOD conditions, including varying numbers of in-distribution classes, different degrees of supervision, and different combinations of unlabeled sets.

Lateral Movement refers to methods by which threat actors gain initial access to a network and then progressively move through said network collecting key data about assets until they reach the ultimate target of their attack. Lateral Movement intrusions have become more intricate with the increasing complexity and interconnected nature of enterprise networks, and require equally sophisticated detection mechanisms to proactively detect such threats in near real-time at enterprise scale. In this paper, the authors propose a novel, lightweight method for Lateral Movement detection using user behavioral analysis and machine learning. Specifically, this paper introduces a novel methodology for cyber domain-specific feature engineering that identifies Lateral Movement behavior on a per-user basis. Furthermore, the engineered features have also been used to develop two supervised machine learning models for Lateral Movement identification that have demonstrably outperformed models previously seen in literature while maintaining robust performance on datasets with high class imbalance. The models and methodology introduced in this paper have also been designed in collaboration with security operators to be relevant and interpretable in order to maximize impact and minimize time to value as a cyber threat detection toolkit. The underlying goal of the paper is to provide a computationally efficient, domain-specific approach to near real-time Lateral Movement detection that is interpretable and robust to enterprise-scale data volumes and class imbalance.

The availability of large scale data with high quality ground truth labels is a challenge when developing supervised machine learning solutions for healthcare domain. Although, the amount of digital data in clinical workflows is increasing, most of this data is distributed on clinical sites and protected to ensure patient privacy. Radiological readings and dealing with large-scale clinical data puts a significant burden on the available resources, and this is where machine learning and artificial intelligence play a pivotal role. Magnetic Resonance Imaging (MRI) for musculoskeletal (MSK) diagnosis is one example where the scans have a wealth of information, but require a significant amount of time for reading and labeling. Self-supervised learning (SSL) can be a solution for handling the lack of availability of ground truth labels, but generally requires a large amount of training data during the pretraining stage. Herein, we propose a slice-based self-supervised deep learning framework (SB-SSL), a novel slice-based paradigm for classifying abnormality using knee MRI scans. We show that for a limited number of cases (<1000), our proposed framework is capable to identify anterior cruciate ligament tear with an accuracy of 89.17% and an AUC of 0.954, outperforming state-of-the-art without usage of external data during pretraining. This demonstrates that our proposed framework is suited for SSL in the limited data regime.