Neural Architecture Search (NAS) has gained widespread attention for its transformative potential in deep learning model design. However, the vast and complex search space of NAS leads to significant computational and time costs. Neural Architecture Generation (NAG) addresses this by reframing NAS as a generation problem, enabling the precise generation of optimal architectures for specific tasks. Despite its promise, mainstream methods like diffusion models face limitations in global search capabilities and are still hindered by high computational and time demands. To overcome these challenges, we propose Evolutionary Diffusion-based Neural Architecture Generation (EDNAG), a novel approach that achieves efficient and training-free architecture generation. EDNAG leverages evolutionary algorithms to simulate the denoising process in diffusion models, using fitness to guide the transition from random Gaussian distributions to optimal architecture distributions. This approach combines the strengths of evolutionary strategies and diffusion models, enabling rapid and effective architecture generation. Extensive experiments demonstrate that EDNAG achieves state-of-the-art (SOTA) performance in architecture optimization, with an improvement in accuracy of up to 10.45%. Furthermore, it eliminates the need for time-consuming training and boosts inference speed by an average of 50 times, showcasing its exceptional efficiency and effectiveness.

Intellectual Property (IP) is a highly specialized domain that integrates technical and legal knowledge, making it inherently complex and knowledge-intensive. Recent advancements in LLMs have demonstrated their potential to handle IP-related tasks, enabling more efficient analysis, understanding, and generation of IP-related content. However, existing datasets and benchmarks focus narrowly on patents or cover limited aspects of the IP field, lacking alignment with real-world scenarios. To bridge this gap, we introduce IPBench, the first comprehensive IP task taxonomy and a large-scale bilingual benchmark encompassing 8 IP mechanisms and 20 distinct tasks, designed to evaluate LLMs in real-world IP scenarios. We benchmark 17 main LLMs, ranging from general purpose to domain-specific, including chat-oriented and reasoning-focused models, under zero-shot, few-shot, and chain-of-thought settings. Our results show that even the top-performing model, DeepSeek-V3, achieves only 75.8% accuracy, indicating significant room for improvement. Notably, open-source IP and law-oriented models lag behind closed-source general-purpose models. To foster future research, we publicly release IPBench, and will expand it with additional tasks to better reflect real-world complexities and support model advancements in the IP domain. We provide the data and code in the supplementary URLs.

Generative models face a fundamental challenge: they must simultaneously learn high-level semantic concepts (what to generate) and low-level synthesis details (how to generate it). Conventional end-to-end training entangles these distinct, and often conflicting objectives, leading to a complex and inefficient optimization process. We argue that explicitly decoupling these tasks is key to unlocking more effective and efficient generative modeling. To this end, we propose Embedded Representation Warmup (ERW), a principled two-phase training framework. The first phase is dedicated to building a robust semantic foundation by aligning the early layers of a diffusion model with a powerful pretrained encoder. This provides a strong representational prior, allowing the second phase -- generative full training with alignment loss to refine the representation -- to focus its resources on high-fidelity synthesis. Our analysis confirms that this efficacy stems from functionally specializing the model's early layers for representation. Empirically, our framework achieves a 11.5$\times$ speedup in 350 epochs to reach FID=1.41 compared to single-phase methods like REPA. Code is available at https://github.com/LINs-lab/ERW.

Commercial Large Language Model (LLM) APIs create a fundamental trust problem: users pay for specific models but have no guarantee that providers deliver them faithfully. Providers may covertly substitute cheaper alternatives (e.g., quantized versions, smaller models) to reduce costs while maintaining advertised pricing. We formalize this model substitution problem and systematically evaluate detection methods under realistic adversarial conditions. Our empirical analysis reveals that software-only methods are fundamentally unreliable: statistical tests on text outputs are query-intensive and fail against subtle substitutions, while methods using log probabilities are defeated by inherent inference nondeterminism in production environments. We argue that this verification gap can be more effectively closed with hardware-level security. We propose and evaluate the use of Trusted Execution Environments (TEEs) as one practical and robust solution. Our findings demonstrate that TEEs can provide provable cryptographic guarantees of model integrity with only a modest performance overhead, offering a clear and actionable path to ensure users get what they pay for. Code is available at https://github.com/sunblaze-ucb/llm-api-audit

Compute scaling for language model (LM) pretraining has outpaced the growth of human-written texts, leading to concerns that data will become the bottleneck to LM scaling. To continue scaling pretraining in this data-constrained regime, we propose that explicitly modeling and inferring the \emph{latent thoughts} that underlie the text generation process can significantly improve pretraining data efficiency. Intuitively, our approach views web text as the compressed final outcome of a verbose human thought process and that the latent thoughts contain important contextual knowledge and reasoning steps that are critical to data-efficient learning. We empirically demonstrate the effectiveness of our approach through data-constrained continued pretraining for math. We first show that synthetic data approaches to inferring latent thoughts significantly improve data efficiency over training on the same amount of raw data. Furthermore, we demonstrate latent thought inference without a strong teacher, where an LM \emph{bootstraps its own performance} by using an EM algorithm to iteratively improve the capability of the trained LM and the quality of thought-augmented pretraining data. We show that a 1B LM can bootstrap its performance across at least three iterations and significantly outperform baselines trained on raw data, with increasing gains from additional inference compute when performing the E-step. The gains from inference scaling and EM iterations suggest new opportunities for scaling data-constrained pretraining.

As digital platforms redefine educational paradigms, ensuring interactivity remains vital for effective learning. This paper explores using Multimodal Large Language Models (MLLMs) to automatically respond to student questions from online lectures - a novel question answering task of real world significance. We introduce the EduVidQA Dataset with 5252 question-answer pairs (both synthetic and real-world) from 296 computer science videos covering diverse topics and difficulty levels. To understand the needs of the dataset and task evaluation, we empirically study the qualitative preferences of students, which we provide as an important contribution to this line of work. Our benchmarking experiments consist of 6 state-of-the-art MLLMs, through which we study the effectiveness of our synthetic data for finetuning, as well as showing the challenging nature of the task. We evaluate the models using both text-based and qualitative metrics, thus showing a nuanced perspective of the models' performance, which is paramount to future work. This work not only sets a benchmark for this important problem, but also opens exciting avenues for future research in the field of Natural Language Processing for Education.

Electronic health Records (EHRs) have become a cornerstone in modern-day healthcare. They are a crucial part for analyzing the progression of patient health; however, their complexity, characterized by long, multivariate sequences, sparsity, and missing values poses significant challenges in traditional deep learning modeling. While Transformer-based models have demonstrated success in modeling EHR data and predicting clinical outcomes, their quadratic computational complexity and limited context length hinder their efficiency and practical applications. On the other hand, State Space Models (SSMs) like Mamba present a promising alternative offering linear-time sequence modeling and improved efficiency for handling long sequences, but focus mostly on mixing sequence-level information rather than channel-level data. To overcome these challenges, we propose HyMaTE (A Hybrid Mamba and Transformer Model for EHR Representation Learning), a novel hybrid model tailored for representing longitudinal data, combining the strengths of SSMs with advanced attention mechanisms. By testing the model on predictive tasks on multiple clinical datasets, we demonstrate HyMaTE's ability to capture an effective, richer, and more nuanced unified representation of EHR data. Additionally, the interpretability of the outcomes achieved by self-attention illustrates the effectiveness of our model as a scalable and generalizable solution for real-world healthcare applications. Codes are available at: https://github.com/healthylaife/HyMaTE.

Point defects play a central role in driving the properties of materials. First-principles methods are widely used to compute defect energetics and structures, including at scale for high-throughput defect databases. However, these methods are computationally expensive, making machine-learning force fields (MLFFs) an attractive alternative for accelerating structural relaxations. Most existing MLFFs are based on graph neural networks (GNNs), which can suffer from oversmoothing and poor representation of long-range interactions. Both of these issues are especially of concern when modeling point defects. To address these challenges, we introduce the Accelerated Deep Atomic Potential Transformer (ADAPT), an MLFF that replaces graph representations with a direct coordinates-in-space formulation and explicitly considers all pairwise atomic interactions. Atoms are treated as tokens, with a Transformer encoder modeling their interactions. Applied to a dataset of silicon point defects, ADAPT achieves a roughly 33 percent reduction in both force and energy prediction errors relative to a state-of-the-art GNN-based model, while requiring only a fraction of the computational cost.

Tool-integrated reasoning has emerged as a key focus for enabling agentic applications. Among these, DeepResearch Agents have gained significant attention for their strong performance on complex, open-ended information-seeking tasks. We introduce Fathom-DeepResearch, an agentic system composed of two specialized models. The first is Fathom-Search-4B, a DeepSearch model trained from Qwen3-4B and optimized for evidence-based investigation through live web search and targeted webpage querying. Its training combines three advances: (i) DUETQA, a 5K-sample dataset generated via multi-agent self-play that enforces strict web-search dependence and heterogeneous source grounding; (ii) RAPO, a zero-overhead extension of GRPO that stabilizes multi-turn Reinforcement Learning with Verifiable Rewards through curriculum pruning, reward-aware advantage scaling, and per-prompt replay buffers; and (iii) a steerable step-level reward that classifies each tool call by cognitive behavior and marginal utility, enabling explicit control over search trajectory breadth, depth, and horizon. These improvements enable reliable extension of tool-calling beyond 20 calls when warranted. The second is Fathom-Synthesizer-4B, trained from Qwen3-4B, which converts multi-turn DeepSearch traces into structured, citation-dense DeepResearch Reports for comprehensive synthesis. Evaluated on DeepSearch benchmarks (SimpleQA, FRAMES, WebWalker, Seal0, MuSiQue) and DeepResearch-Bench, the system achieves state-of-the-art performance in the open-weights category while demonstrating strong generalization to diverse reasoning tasks including HLE, AIME-25, GPQA-Diamond, and MedQA.

Since the advent of large language models (LLMs), research has focused on instruction following and deductive reasoning. A central question remains: can these models discover new knowledge, and how can we evaluate this ability? We address this by studying abductive reasoning-the generation of plausible hypotheses to explain observations-and introduce GEAR (General Evaluation for Abductive Reasoning), a general-purpose, fully automated, transparent, and label-free evaluation paradigm. GEAR scores hypothesis sets by three metrics: consistency (each hypothesis explains the observations), generalizability (consistent hypotheses make meaningful predictions on unseen inputs), and diversity (the set covers distinct predictions and patterns). Built this way, GEAR is scalable (no human gold answers), reliable (deterministic scoring aligned with classical abduction), and open-ended (scores improve only when models produce new plausible hypotheses, unlike static benchmarks that saturate once accuracy is high). Using GEAR, we conduct a fine-grained study of nine LLMs on four abduction benchmarks with 1,500 problems, generating over 50,000 candidate hypotheses and revealing model differences obscured by gold-answer or purely human evaluations. We further propose a momentum-based curriculum that adjusts GEAR-derived training data by learning velocity: it starts with what the model learns quickly and shifts toward harder objectives such as generating diverse hypotheses once the model is confident on foundational objectives. Without gold-label supervision, this strategy improves all GEAR objectives and these gains transfer to established abductive reasoning benchmarks. Taken together, GEAR provides a principled framework that evaluates abduction and supplies label-free, scalable training signals that help LLMs produce more diverse and reliable hypotheses.