Deep Learning
Where did you get that? Towards Summarization Attribution for Analysts
B, Violet, Conroy, John M., Lynch, Sean, M, Danielle, Molino, Neil P., Wiechmann, Aaron, Yang, Julia S.
Analysts require attribution, as nothing can be reported without knowing the source of the information. In this paper, we will focus on automatic methods for attribution, linking each sentence in the summary to a portion of the source text, which may be in one or more documents. We explore using a hybrid summarization, i.e., an automatic paraphrase of an extractive summary, to ease attribution. We also use a custom topology to identify the proportion of different categories of attribution-related errors.
The Non-Linear Representation Dilemma: Is Causal Abstraction Enough for Mechanistic Interpretability?
Sutter, Denis, Minder, Julian, Hofmann, Thomas, Pimentel, Tiago
The concept of causal abstraction got recently popularised to demystify the opaque decision-making processes of machine learning models; in short, a neural network can be abstracted as a higher-level algorithm if there exists a function which allows us to map between them. Notably, most interpretability papers implement these maps as linear functions, motivated by the linear representation hypothesis: the idea that features are encoded linearly in a model's representations. However, this linearity constraint is not required by the definition of causal abstraction. In this work, we critically examine the concept of causal abstraction by considering arbitrarily powerful alignment maps. In particular, we prove that under reasonable assumptions, any neural network can be mapped to any algorithm, rendering this unrestricted notion of causal abstraction trivial and uninformative. We complement these theoretical findings with empirical evidence, demonstrating that it is possible to perfectly map models to algorithms even when these models are incapable of solving the actual task; e.g., on an experiment using randomly initialised language models, our alignment maps reach 100\% interchange-intervention accuracy on the indirect object identification task. This raises the non-linear representation dilemma: if we lift the linearity constraint imposed to alignment maps in causal abstraction analyses, we are left with no principled way to balance the inherent trade-off between these maps' complexity and accuracy. Together, these results suggest an answer to our title's question: causal abstraction is not enough for mechanistic interpretability, as it becomes vacuous without assumptions about how models encode information. Studying the connection between this information-encoding assumption and causal abstraction should lead to exciting future work.
Knowledge-Guided Brain Tumor Segmentation via Synchronized Visual-Semantic-Topological Prior Fusion
Background: Brain tumor segmentation requires precise delineation of hierarchical structures from multi-sequence MRI. However, existing deep learning methods primarily rely on visual features, showing insufficient discriminative power in ambiguous boundary regions. Moreover, they lack explicit integration of medical domain knowledge such as anatomical semantics and geometric topology. Methods: We propose a knowledge-guided framework, Synchronized Tri-modal Prior Fusion (STPF), that explicitly integrates three heterogeneous knowledge priors: pathology-driven differential features (T1ce-T1, T2-FLAIR, T1/T2) encoding contrast patterns; unsupervised semantic descriptions transformed into voxel-level guidance via spatialization operators; and geometric constraints extracted through persistent homology analysis. A dual-level fusion architecture dynamically allocates prior weights at the voxel level based on confidence and at the sample level through hypernetwork-generated conditional vectors. Furthermore, nested output heads structurally ensure the hierarchical constraint ET subset TC subset WT. Results: STPF achieves a mean Dice coefficient of 0.868 on the BraTS 2020 dataset, surpassing the best baseline by 2.6 percentage points (3.09% relative improvement). Notably, five-fold cross-validation yields coefficients of variation between 0.23% and 0.33%, demonstrating stable performance. Additionally, ablation experiments show that removing topological and semantic priors leads to performance degradation of 2.8% and 3.5%, respectively. Conclusions: By explicitly integrating medical knowledge priors - anatomical semantics and geometric constraints - STPF improves segmentation accuracy in ambiguous boundary regions while demonstrating generalization capability and clinical deployment potential.
Conversational Intent-Driven GraphRAG: Enhancing Multi-Turn Dialogue Systems through Adaptive Dual-Retrieval of Flow Patterns and Context Semantics
Zhu, Ziqi, Hu, Tao, Zhang, Honglong, Yang, Dan, Chen, HanGeng, Zhang, Mengran, Chen, Xilun
We present CID-GraphRAG (Conversational Intent-Driven Graph Retrieval Augmented Generation), a novel framework that addresses the limitations of existing dialogue systems in maintaining both contextual coherence and goal-oriented progression in multi-turn customer service conversations. Unlike traditional RAG systems that rely solely on semantic similarity (Conversation RAG) or standard knowledge graphs (GraphRAG), CID-GraphRAG constructs dynamic intent transition graphs from goal achieved historical dialogues and implements a dual-retrieval mechanism that adaptively balances intent-based graph traversal with semantic search. This approach enables the system to simultaneously leverage both conversional intent flow patterns and contextual semantics, significantly improving retrieval quality and response quality. In extensive experiments on real-world customer service dialogues, we employ both automatic metrics and LLM-as-judge assessments, demonstrating that CID-GraphRAG significantly outperforms both semantic-based Conversation RAG and intent-based GraphRAG baselines across all evaluation criteria. Quantitatively, CID-GraphRAG demonstrates substantial improvements over Conversation RAG across automatic metrics, with relative gains of 11% in BLEU, 5% in ROUGE-L, 6% in METEOR, and most notably, a 58% improvement in response quality according to LLM-as-judge evaluations. These results demonstrate that the integration of intent transition structures with semantic retrieval creates a synergistic effect that neither approach achieves independently, establishing CID-GraphRAG as an effective framework for addressing the challenges of maintaining contextual coherence and goal-oriented progression in knowledge-intensive multi-turn dialogues.
Capturing Polysemanticity with PRISM: A Multi-Concept Feature Description Framework
Kopf, Laura, Feldhus, Nils, Bykov, Kirill, Bommer, Philine Lou, Hedström, Anna, Höhne, Marina M. -C., Eberle, Oliver
Automated interpretability research aims to identify concepts encoded in neural network features to enhance human understanding of model behavior. Within the context of large language models (LLMs) for natural language processing (NLP), current automated neuron-level feature description methods face two key challenges: limited robustness and the assumption that each neuron encodes a single concept (monosemanticity), despite increasing evidence of polysemanticity. This assumption restricts the expressiveness of feature descriptions and limits their ability to capture the full range of behaviors encoded in model internals. To address this, we introduce Polysemantic FeatuRe Identification and Scoring Method (PRISM), a novel framework specifically designed to capture the complexity of features in LLMs. Unlike approaches that assign a single description per neuron, common in many automated interpretability methods in NLP, PRISM produces more nuanced descriptions that account for both monosemantic and polysemantic behavior. We apply PRISM to LLMs and, through extensive benchmarking against existing methods, demonstrate that our approach produces more accurate and faithful feature descriptions, improving both overall description quality (via a description score) and the ability to capture distinct concepts when polysemanticity is present (via a polysemanticity score).
STOAT: Spatial-Temporal Probabilistic Causal Inference Network
Yang, Yang, Yin, Du, Xue, Hao, Salim, Flora
Spatial-temporal causal time series (STC-TS) involve region-specific temporal observations driven by causally relevant covariates and interconnected across geographic or network-based spaces. Existing methods often model spatial and temporal dynamics independently and overlook causality-driven probabilistic forecasting, limiting their predictive power. To address this, we propose STOAT (Spatial-Temporal Probabilistic Causal Inference Network), a novel framework for probabilistic forecasting in STC-TS. The proposed method extends a causal inference approach by incorporating a spatial relation matrix that encodes interregional dependencies (e.g. proximity or connectivity), enabling spatially informed causal effect estimation. The resulting latent series are processed by deep probabilistic models to estimate the parameters of the distributions, enabling calibrated uncertainty modeling. We further explore multiple output distributions (e.g., Gaussian, Student's-$t$, Laplace) to capture region-specific variability. Experiments on COVID-19 data across six countries demonstrate that STOAT outperforms state-of-the-art probabilistic forecasting models (DeepAR, DeepVAR, Deep State Space Model, etc.) in key metrics, particularly in regions with strong spatial dependencies. By bridging causal inference and geospatial probabilistic forecasting, STOAT offers a generalizable framework for complex spatial-temporal tasks, such as epidemic management.
Joint-GCG: Unified Gradient-Based Poisoning Attacks on Retrieval-Augmented Generation Systems
Wang, Haowei, Zhang, Rupeng, Wang, Junjie, Li, Mingyang, Huang, Yuekai, Wang, Dandan, Wang, Qing
Retrieval-Augmented Generation (RAG) systems enhance Large Language Models (LLMs) by retrieving relevant documents from external corpora before generating responses. This approach significantly expands LLM capabilities by leveraging vast, up-to-date external knowledge. However, this reliance on external knowledge makes RAG systems vulnerable to corpus poisoning attacks that manipulate generated outputs via poisoned document injection. Existing poisoning attack strategies typically treat the retrieval and generation stages as disjointed, limiting their effectiveness. We propose Joint-GCG, the first framework to unify gradient-based attacks across both retriever and generator models through three innovations: (1) Cross-Vocabulary Projection for aligning embedding spaces, (2) Gradient Tokenization Alignment for synchronizing token-level gradient signals, and (3) Adaptive Weighted Fusion for dynamically balancing attacking objectives. Evaluations demonstrate that Joint-GCG achieves at most 25% and an average of 5% higher attack success rate than previous methods across multiple retrievers and generators. While optimized under a white-box assumption, the generated poisons show unprecedented transferability to unseen models. Joint-GCG's innovative unification of gradient-based attacks across retrieval and generation stages fundamentally reshapes our understanding of vulnerabilities within RAG systems. Our code is available at https://github.com/NicerWang/Joint-GCG.
anyECG-chat: A Generalist ECG-MLLM for Flexible ECG Input and Multi-Task Understanding
Li, Haitao, Li, Ziyu, Mao, Yiheng, Liu, Ziyi, Sun, Zhoujian, Huang, Zhengxing
The advent of multimodal large language models (MLLMs) has sparked interest in their application to electrocardiogram (ECG) analysis. However, existing ECG-focused MLLMs primarily focus on report generation tasks, often limited to single 12-lead, short-duration (10s) ECG inputs, thereby un-derutilizing the potential of MLLMs. To this end, we aim to develop a MLLM for ECG analysis that supports a broader range of tasks and more flexible ECG inputs. However, existing ECG-QA datasets are often monotonous. To address this gap, we first constructed the anyECG dataset, which encompasses a wide variety of tasks, including report generation, abnormal waveform localization, and open-ended question answering. In addition to standard hospital ECGs, we introduced long-duration reduced-lead ECGs for home environments and multiple ECG comparison scenarios commonly encountered in clinical practice. Furthermore, we propose the anyECG-chat model, which supports dynamic-length ECG inputs and multiple ECG inputs. We trained the model using a three-stage curriculum training recipe with the anyECG dataset. A comprehensive evaluation was conducted, demonstrating that anyECG-chat is capable of supporting various practical application scenarios, including not only common report generation tasks but also abnormal waveform localization for long-duration reduced-lead ECGs in home environments and comprehensive comparative analysis of multiple ECGs.
Learning API Functionality from In-Context Demonstrations for Tool-based Agents
Patel, Bhrij, Jagmohan, Ashish, Vempaty, Aditya
Digital tool-based agents, powered by Large Language Models (LLMs), that invoke external Application Programming Interfaces (APIs) often rely on documentation to understand API functionality. However, such documentation is frequently missing, outdated, privatized, or inconsistent-hindering the development of reliable, general-purpose agents. In this work, we propose a new research direction: learning of API functionality directly from in-context demonstrations. This task is a new paradigm applicable in scenarios without documentation. Using API benchmarks, we collect demonstrations from both expert agents and from self-exploration. To understand what information demonstrations must convey for successful task completion, we extensively study how the number of demonstrations and the use of LLM-generated summaries and evaluations affect the task success rate of the API-based agent. Our experiments across 3 datasets and 6 models show that learning functionality from in-context demonstrations remains a non-trivial challenge, even for state-of-the-art LLMs. We find that providing explicit function calls and natural language critiques significantly improves the agent's task success rate due to more accurate parameter filling. We analyze failure modes, identify sources of error, and highlight key open challenges for future work in documentation-free, self-improving, API-based agents.
LLMs Struggle to Reject False Presuppositions when Misinformation Stakes are High
Sieker, Judith, Lachenmaier, Clara, Zarrieß, Sina
This paper examines how LLMs handle false presuppositions and whether certain linguistic factors influence their responses to falsely presupposed content. Presuppositions subtly introduce information as given, making them highly effective at embedding disputable or false information. This raises concerns about whether LLMs, like humans, may fail to detect and correct misleading assumptions introduced as false presuppositions, even when the stakes of misinformation are high. Using a systematic approach based on linguistic presupposition analysis, we investigate the conditions under which LLMs are more or less sensitive to adopt or reject false presuppositions. Focusing on political contexts, we examine how factors like linguistic construction, political party, and scenario probability impact the recognition of false presuppositions. We conduct experiments with a newly created dataset and examine three LLMs: OpenAI's GPT-4-o, Meta's LLama-3-8B, and MistralAI's Mistral-7B-v03. Our results show that the models struggle to recognize false presuppositions, with performance varying by condition. This study highlights that linguistic presupposition analysis is a valuable tool for uncovering the reinforcement of political misinformation in LLM responses.