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 Deep Learning


Uncertainty-Aware Deep Learning Framework for Remaining Useful Life Prediction in Turbofan Engines with Learned Aleatoric Uncertainty

arXiv.org Artificial Intelligence

Accurate Remaining Useful Life (RUL) prediction coupled with uncertainty quantification remains a critical challenge in aerospace prognostics. This research introduces a novel uncertainty-aware deep learning framework that learns aleatoric uncertainty directly through probabilistic modeling, an approach unexplored in existing CMAPSS-based literature. Our hierarchical architecture integrates multi-scale Inception blocks for temporal pattern extraction, bidirectional Long Short-Term Memory networks for sequential modeling, and a dual-level attention mechanism operating simultaneously on sensor and temporal dimensions. The innovation lies in the Bayesian output layer that predicts both mean RUL and variance, enabling the model to learn data-inherent uncertainty. Comprehensive preprocessing employs condition-aware clustering, wavelet denoising, and intelligent feature selection. Experimental validation on NASA CMAPSS benchmarks (FD001-FD004) demonstrates competitive overall performance with RMSE values of 16.22, 19.29, 16.84, and 19.98 respectively. Remarkably, our framework achieves breakthrough critical zone performance (RUL <= 30 cycles) with RMSE of 5.14, 6.89, 5.27, and 7.16, representing 25-40 percent improvements over conventional approaches and establishing new benchmarks for safety-critical predictions. The learned uncertainty provides well-calibrated 95 percent confidence intervals with coverage ranging from 93.5 percent to 95.2 percent, enabling risk-aware maintenance scheduling previously unattainable in CMAPSS literature.


CLaRa: Bridging Retrieval and Generation with Continuous Latent Reasoning

arXiv.org Artificial Intelligence

Retrieval-augmented generation (RAG) enhances large language models (LLMs) with external knowledge but still suffers from long contexts and disjoint retrieval-generation optimization. In this work, we propose CLaRa (Continuous Latent Reasoning), a unified framework that performs embedding-based compression and joint optimization in a shared continuous space. To obtain semantically rich and retrievable compressed vectors, we introduce SCP, a key-preserving data synthesis framework using QA and paraphrase supervision. CLaRa then trains the reranker and generator end-to-end via a single language modeling loss, with gradients flowing through both modules using a differentiable top-k estimator. Theoretically, this unified optimization aligns retrieval relevance with answer quality. Experiments across multiple QA benchmarks show that CLaRa achieves state-of-the-art compression and reranking performance, often surpassing text-based fine-tuned baselines.


scipy.spatial.transform: Differentiable Framework-Agnostic 3D Transformations in Python

arXiv.org Artificial Intelligence

Three-dimensional rigid-body transforms, i.e. rotations and translations, are central to modern differentiable machine learning pipelines in robotics, vision, and simulation. However, numerically robust and mathematically correct implementations, particularly on SO(3), are error-prone due to issues such as axis conventions, normalizations, composition consistency and subtle errors that only appear in edge cases. SciPy's spatial$.$transform module is a rigorously tested Python implementation. However, it historically only supported NumPy, limiting adoption in GPU-accelerated and autodiff-based workflows. We present a complete overhaul of SciPy's spatial$.$transform functionality that makes it compatible with any array library implementing the Python array API, including JAX, PyTorch, and CuPy. The revised implementation preserves the established SciPy interface while enabling GPU/TPU execution, JIT compilation, vectorized batching, and differentiation via native autodiff of the chosen backend. We demonstrate how this foundation supports differentiable scientific computing through two case studies: (i) scalability of 3D transforms and rotations and (ii) a JAX drone simulation that leverages SciPy's Rotation for accurate integration of rotational dynamics. Our contributions have been merged into SciPy main and will ship in the next release, providing a framework-agnostic, production-grade basis for 3D spatial math in differentiable systems and ML.


Generative Adversarial Post-Training Mitigates Reward Hacking in Live Human-AI Music Interaction

arXiv.org Artificial Intelligence

Most applications of generative AI involve a sequential interaction in which a person inputs a prompt and waits for a response, and where reaction time and adaptiv-ity are not important factors. In contrast, live jamming is a collaborative interaction that requires real-time coordination and adaptation without access to the other player's future moves, while preserving diversity to sustain a creative flow. Reinforcement learning post-training enables effective adaptation through on-policy interaction, yet it often reduces output diversity by exploiting coherence-based rewards. This collapse, known as "reward hacking", affects many RL post-training pipelines, but is especially harmful in live jamming, where musical creativity relies on dynamic variation and mutual responsiveness. In this paper, we propose a novel adversarial training method on policy-generated trajectories to mitigate reward hacking in RL post-training for melody-to-chord accompaniment. A co-evolving discriminator separates policy trajectories from the data distribution, while the policy maximizes the discriminator output in addition to coherence rewards to prevent collapse to trivial outputs. We evaluate accompaniment quality and output diversity in simulation with both fixed test melodies and learned melody agents, and we conduct a user study with the model deployed in a real-time interactive system with expert musicians. Quantitative evaluation and user feedback demonstrate improved output diversity, harmonic coherence, adaptation speed and user agency. Our results demonstrate a simple yet effective method to mitigate reward hacking in RL post-training of generative sequence models. The combination of large-scale transformer-based models and reinforcement learning (RL) post-training has revolutionized AI, with over 1 billion people now using large language models (LLMs) trained with these techniques (OpenAI, 2025; Perez, 2025). However, most applications of generative AI still involve a slow back-and-forth interaction, where the user inputs a request, and then waits--sometimes several minutes--for a response.


CLLMRec: LLM-powered Cognitive-Aware Concept Recommendation via Semantic Alignment and Prerequisite Knowledge Distillation

arXiv.org Artificial Intelligence

The growth of Massive Open Online Courses (MOOCs) presents significant challenges for personalized learning, where concept recommendation is crucial. Existing approaches typically rely on heterogeneous information networks or knowledge graphs to capture conceptual relationships, combined with knowledge tracing models to assess learners' cognitive states. However, these methods face significant limitations due to their dependence on high-quality structured knowledge graphs, which are often scarce in real-world educational scenarios. To address this fundamental challenge, this paper proposes CLLMRec, a novel framework that leverages Large Language Models through two synergistic technical pillars: Semantic Alignment and Prerequisite Knowledge Distillation. The Semantic Alignment component constructs a unified representation space by encoding unstructured textual descriptions of learners and concepts. The Prerequisite Knowledge Distillation paradigm employs a teacher-student architecture, where a large teacher LLM (implemented as the Prior Knowledge Aware Component) extracts conceptual prerequisite relationships from its internalized world knowledge and distills them into soft labels to train an efficient student ranker. Building upon these foundations, our framework incorporates a fine-ranking mechanism that explicitly models learners' real-time cognitive states through deep knowledge tracing, ensuring recommendations are both structurally sound and cognitively appropriate. Extensive experiments on two real-world MOOC datasets demonstrate that CLLMRec significantly outperforms existing baseline methods across multiple evaluation metrics, validating its effectiveness in generating truly cognitive-aware and personalized concept recommendations without relying on explicit structural priors.


KRAL: Knowledge and Reasoning Augmented Learning for LLM-assisted Clinical Antimicrobial Therapy

arXiv.org Artificial Intelligence

Clinical antimicrobial therapy requires the dynamic integration of pathogen profiles, host factors, pharmacological properties of antimicrobials, and the severity of infection.This complexity imposes fundamental limitations on the applicability of Large Language Models (LLMs) in high-stakes clinical decision-making including knowledge gaps, data privacy concerns, high deployment costs, and limited reasoning capabilities. This is the first author footnote. A hierarchical evaluation employing diverse teacher-model proxies reduces assessment costs, while modular interface design facilitates seamless system updates. Experimental results demonstrate that KRAL significantly outperforms traditional Retrieval-Augmented Generation (RAG) and Supervised Fine-Tuning (SFT) methods. It improves knowledge question-answering capability (Accuracy@1 on the external open-source benchmark MEDQA increased by 1.8% vs. SFT and 3.6% vs. RAG) and reasoning capability (Pass@1 on the external benchmark PUMCH Antimicrobial increased by 27% vs. SFT and 27.2% vs. RAG), achieved at 20% of SFT's long-term training costs. This establishes KRAL as an effective solution for enhancing local LLMs' clinical diagnostic capabilities, enabling low-cost, high-safety deployment in complex medical decision support. Introduction Antimicrobial therapy constitutes a cornerstone of modern clinical practice. The formulation of an effective regimen necessitates the integration of pathogen-specific factors, host characteristics, pharmacokinetic pharma-codynamic (PK/PD) properties of antimicrobials, and infection severity, all of which are dynamic and interrelated. This places significant cognitive load on clinicians, especially for non-infectious disease specialists or in situations where pathogens are unknown and time is limited, which may result in sub-optimal prescribing decisions, thereby increasing the likelihood of therapeutic failure, antimicrobial toxicity, and the emergence of multidrug-resistant (MDR) pathogens. Large language models (LLMs) have recently emerged as promising tools for enhancing clinical decision support systems (CDSS), owing to their advanced natural language understanding and generation capabilities. Nevertheless, the direct deployment of general-purpose LLMs in high-stakes clinical domains such as antimicrobial therapy is fraught with limitations, including: Knowledge bias: Medical content constitutes <0.3 % of the pre-training corpora[1] in mainstream LLMs (e.g., GPT-3), resulting in limited coverage of rare or emerging pathogens[2-4], outdated guideline adherence[5-9](Appendix A1), and suboptimal performance on atypical presentations. 2 Data privacy and compliance risks: The use of closed-source, cloud-based LLMs (e.g., GPT-4) for processing unencrypted protected health information (PHI) may violate HIPAA/GDPR-equivalent regulations, even under private deployment scenarios if online guideline updates are required[10-12].


Think Visually, Reason Textually: Vision-Language Synergy in ARC

arXiv.org Artificial Intelligence

reasoning from minimal examples remains a core unsolved problem for frontier foundation models such as GPT-5 and Grok 4. These models still fail to infer structured transformation rules from a handful of examples, which is a key hallmark of human intelligence. The Abstraction and Reasoning Corpus for Artificial General Intelligence (ARC-AGI) provides a rigorous testbed for this capability, demanding conceptual rule induction and transfer to novel tasks. Most existing methods treat ARC-AGI as a purely textual reasoning task, overlooking the fact that humans rely heavily on visual abstraction when solving such puzzles. However, our pilot experiments reveal a paradox: naively rendering ARC-AGI grids as images degrades performance due to imprecise rule execution. This leads to our central hypothesis that vision and language possess complementary strengths across distinct reasoning stages: vision supports global pattern abstraction and verification, whereas language specializes in symbolic rule formulation and precise execution. Building on this insight, we introduce two synergistic strategies: (1) Vision-Language Synergy Reasoning (VLSR), which decomposes ARC-AGI into modality-aligned subtasks; and (2) Modality-Switch Self-Correction (MSSC), which leverages vision to verify text-based reasoning for intrinsic error correction. Extensive experiments demonstrate that our approach yields up to a 4.33% improvement over text-only baselines across diverse flagship models and multiple ARC-AGI tasks. Our findings suggest that unifying visual abstraction with linguistic reasoning is a crucial step toward achieving general-izable, human-like intelligence in future foundation models. Source code is released at https://github.com/


Operationalizing Pluralistic Values in Large Language Model Alignment Reveals Trade-offs in Safety, Inclusivity, and Model Behavior

arXiv.org Artificial Intelligence

Although large language models (LLMs) are increasingly trained using human feedback for safety and alignment with human values, alignment decisions often overlook human social diversity. This study examines how incorporating pluralistic values affects LLM behavior by systematically evaluating demographic variation and design parameters in the alignment pipeline. We collect alignment data from US and German participants (N = 1,095 participants, 27,375 ratings) who rated LLM responses across five dimensions: Toxicity, Emotional Awareness (EA), Sensitivity, Stereotypical Bias, and Helpfulness. We fine-tuned multiple Large Language Models and Large Reasoning Models using preferences from different social groups while varying rating scales, disagreement handling methods, and optimization techniques. The results revealed systematic demographic effects: male participants rated responses 18% less toxic than female participants; conservative and Black participants rated responses 27.9% and 44% higher on EA than liberal and White participants, respectively. Models fine-tuned on group-specific preferences exhibited distinct behaviors. Technical design choices showed strong effects: the preservation of rater disagreement achieved roughly 53% greater toxicity reduction than majority voting, and 5-point scales yielded about 22% more reduction than binary formats; and Direct Preference Optimization (DPO) consistently outperformed Group Relative Policy Optimization (GRPO) in multi-value optimization. These findings represent a preliminary step in answering a critical question: How should alignment balance expert-driven and user-driven signals to ensure both safety and fair representation?


Angular Gradient Sign Method: Uncovering Vulnerabilities in Hyperbolic Networks

arXiv.org Artificial Intelligence

Adversarial examples in neural networks have been extensively studied in Euclidean geometry, but recent advances in \textit{hyperbolic networks} call for a reevaluation of attack strategies in non-Euclidean geometries. Existing methods such as FGSM and PGD apply perturbations without regard to the underlying hyperbolic structure, potentially leading to inefficient or geometrically inconsistent attacks. In this work, we propose a novel adversarial attack that explicitly leverages the geometric properties of hyperbolic space. Specifically, we compute the gradient of the loss function in the tangent space of hyperbolic space, decompose it into a radial (depth) component and an angular (semantic) component, and apply perturbation derived solely from the angular direction. Our method generates adversarial examples by focusing perturbations in semantically sensitive directions encoded in angular movement within the hyperbolic geometry. Empirical results on image classification, cross-modal retrieval tasks and network architectures demonstrate that our attack achieves higher fooling rates than conventional adversarial attacks, while producing high-impact perturbations with deeper insights into vulnerabilities of hyperbolic embeddings. This work highlights the importance of geometry-aware adversarial strategies in curved representation spaces and provides a principled framework for attacking hierarchical embeddings.


SculptDrug : A Spatial Condition-Aware Bayesian Flow Model for Structure-based Drug Design

arXiv.org Artificial Intelligence

Structure-Based drug design (SBDD) has emerged as a popular approach in drug discovery, leveraging three-dimensional protein structures to generate drug ligands. However, existing generative models encounter several key challenges: (1) incorporating boundary condition constraints, (2) integrating hierarchical structural conditions, and (3) ensuring spatial modeling fidelity. To address these limitations, we propose SculptDrug, a spatial condition-aware generative model based on Bayesian flow networks (BFNs). First, SculptDrug follows a BFN-based framework and employs a progressive denoising strategy to ensure spatial modeling fidelity, iteratively refining atom positions while enhancing local interactions for precise spatial alignment. Second, we introduce a Boundary Awareness Block that incorporates protein surface constraints into the generative process to ensure that generated ligands are geometrically compatible with the target protein. Third, we design a Hierarchical Encoder that captures global structural context while preserving fine-grained molecular interactions, ensuring overall consistency and accurate ligand-protein conformations. We evaluate SculptDrug on the CrossDocked dataset, and experimental results demonstrate that SculptDrug outperforms state-of-the-art baselines, highlighting the effectiveness of spatial condition-aware modeling.