Deep Learning
An Additive Manufacturing Part Qualification Framework: Transferring Knowledge of Stress-strain Behaviors from Additively Manufactured Polymers to Metals
Part qualification is crucial in additive manufacturing (AM) because it ensures that additively manufactured parts can be consistently produced and reliably used in critical applications. Part qualification aims at verifying that an additively manufactured part meets performance requirements; therefore, predicting the complex stress-strain behaviors of additively manufactured parts is critical. We develop a dynamic time warping (DTW)-transfer learning (TL) framework for additive manufacturing part qualification by transferring knowledge of the stress-strain behaviors of additively manufactured low-cost polymers to metals. Specifically, the framework employs DTW to select a polymer dataset as the source domain that is the most relevant to the target metal dataset. Using a long short-term memory (LSTM) model, four source polymers (i.e., Nylon, PLA, CF-ABS, and Resin) and three target metals (i.e., AlSi10Mg, Ti6Al4V, and carbon steel) that are fabricated by different AM techniques are utilized to demonstrate the effectiveness of the DTW-TL framework. Experimental results show that the DTW-TL framework identifies the closest match between polymers and metals to select one single polymer dataset as the source domain. The DTW-TL model achieves the lowest mean absolute percentage error of 12.41% and highest coefficient of determination of 0.96 when three metals are used as the target domain, respectively, outperforming the vanilla LSTM model without TL as well as the TL model pre-trained on four polymer datasets as the source domain.
An Agentic AI System for Multi-Framework Communication Coding
Yang, Bohao, Yang, Rui, Biro, Joshua M., Wang, Haoyuan, Handley, Jessica L., Richardson, Brianna, Bessias, Sophia, Economou-Zavlanos, Nicoleta, Bedoya, Armando D., Agrawal, Monica, Zavlanos, Michael M., Chowdhury, Anand, Ratwani, Raj M., Sun, Kai, Pollak, Kathryn I., Pencina, Michael J., Hong, Chuan
Clinical communication is central to patient outcomes, yet large-scale human annotation of patient-provider conversation remains labor-intensive, inconsistent, and difficult to scale. Existing approaches based on large language models typically rely on single-task models that lack adaptability, interpretability, and reliability, especially when applied across various communication frameworks and clinical domains. In this study, we developed a Multi-framework Structured Agentic AI system for Clinical Communication (MOSAIC), built on a LangGraph-based architecture that orchestrates four core agents, including a Plan Agent for codebook selection and workflow planning, an Update Agent for maintaining up-to-date retrieval databases, a set of Annotation Agents that applies codebook-guided retrieval-augmented generation (RAG) with dynamic few-shot prompting, and a Verification Agent that provides consistency checks and feedback. To evaluate performance, we compared MOSAIC outputs against gold-standard annotations created by trained human coders. We developed and evaluated MOSAIC using 26 gold standard annotated transcripts for training and 50 transcripts for testing, spanning rheumatology and OB/GYN domains. On the test set, MOSAIC achieved an overall F1 score of 0.928. Performance was highest in the Rheumatology subset (F1 = 0.962) and strongest for Patient Behavior (e.g., patients asking questions, expressing preferences, or showing assertiveness). Ablations revealed that MOSAIC outperforms baseline benchmarking.
QSTN: A Modular Framework for Robust Questionnaire Inference with Large Language Models
Kreutner, Maximilian, Rupprecht, Jens, Ahnert, Georg, Salem, Ahmed, Strohmaier, Markus
We introduce QSTN, an open-source Python framework for systematically generating responses from questionnaire-style prompts to support in-silico surveys and annotation tasks with large language models (LLMs). QSTN enables robust evaluation of questionnaire presentation, prompt perturbations, and response generation methods. Our extensive evaluation ($>40 $ million survey responses) shows that question structure and response generation methods have a significant impact on the alignment of generated survey responses with human answers, and can be obtained for a fraction of the compute cost. In addition, we offer a no-code user interface that allows researchers to set up robust experiments with LLMs without coding knowledge. We hope that QSTN will support the reproducibility and reliability of LLM-based research in the future.
Protein Secondary Structure Prediction Using Transformers
Predicting protein secondary structures such as alpha helices, beta sheets, and coils from amino acid sequences is essential for understanding protein function. This work presents a transformer-based model that applies attention mechanisms to protein sequence data to predict structural motifs. A sliding-window data augmentation technique is used on the CB513 dataset to expand the training samples. The transformer shows strong ability to generalize across variable-length sequences while effectively capturing both local and long-range residue interactions.
Examining Student Interactions with a Pedagogical AI-Assistant for Essay Writing and their Impact on Students Writing Quality
Febriantoro, Wicaksono, Zhou, Qi, Suraworachet, Wannapon, Bulathwela, Sahan, Gauthier, Andrea, Millan, Eva, Cukurova, Mutlu
The dynamic nature of interactions between students and GenAI, as well as their relationship to writing quality, remains underexplored. While most research has examined how general-purpose GenAI can support writing, fewer studies have investigated how students interact with pedagogically designed systems across different phases of the writing process. To address this gap, we evaluated a GenAI-driven essay-writing assistant (EWA) designed to support higher education students in argumentative writing. Drawing on 1,282 interaction logs from 32 undergraduates during a two-hour writing session, Sequential Pattern Mining and K-Means clustering were used to identify behavioral patterns. Two clusters emerged: Cluster 1 emphasized outline planning and essay structure, while Cluster 2 focused on content development. A Mann-Whitney U test revealed a moderate effect size (r = 0.36) in the essay Organization dimension, with Cluster 1 showing higher scores. Qualitative analysis indicated that students with better performance actively wrote and shared essay sections with EWA for feedback, rather than interacted passively by asking questions. These findings suggest implications for teaching and system design. Teachers can encourage active engagement, while future EWAs may integrate automatic labeling and monitoring to prompt students to move from questioning to writing, enabling fuller benefits from GenAI-supported learning.
Long-Sequence LSTM Modeling for NBA Game Outcome Prediction Using a Novel Multi-Season Dataset
Rios, Charles, Han, Longzhen, Baimagambetov, Almas, Polatidis, Nikolaos
Predicting the outcomes of professional basketball games, particularly in the National Basketball Association (NBA), has become increasingly important for coaching strategy, fan engagement, and sports betting. However, many existing prediction models struggle with concept drift, limited temporal context, and instability across seasons. To advance forecasting in this domain, we introduce a newly constructed longitudinal NBA dataset covering the 2004-05 to 2024-25 seasons and present a deep learning framework designed to model long-term performance trends. Our primary contribution is a Long Short-Term Memory (LSTM) architecture that leverages an extended sequence length of 9,840 games equivalent to eight full NBA seasons to capture evolving team dynamics and season-over-season dependencies. We compare this model against several traditional Machine Learning (ML) and Deep Learning (DL) baselines, including Logistic Regression, Random Forest, Multi-Layer Perceptron (MLP), and Convolutional Neural Network (CNN). The LSTM achieves the best performance across all metrics, with 72.35 accuracy, 73.15 precision and 76.13 AUC-ROC. These results demonstrate the importance of long-sequence temporal modeling in basketball outcome prediction and highlight the value of our new multi-season dataset for developing robust, generalizable NBA forecasting systems.
A Hybrid Model for Stock Market Forecasting: Integrating News Sentiment and Time Series Data with Graph Neural Networks
Sadek, Nader, Moawad, Mirette, Naguib, Christina, Elzahaby, Mariam
Stock market prediction is a long-standing challenge in finance, as accurate forecasts support informed investment decisions. Traditional models rely mainly on historical prices, but recent work shows that financial news can provide useful external signals. This paper investigates a multimodal approach that integrates companies' news articles with their historical stock data to improve prediction performance. We compare a Graph Neural Network (GNN) model with a baseline LSTM model. Historical data for each company is encoded using an LSTM, while news titles are embedded with a language model. These embeddings form nodes in a heterogeneous graph, and GraphSAGE is used to capture interactions between articles, companies, and industries. We evaluate two targets: a binary direction-of-change label and a significance-based label. Experiments on the US equities and Bloomberg datasets show that the GNN outperforms the LSTM baseline, achieving 53% accuracy on the first target and a 4% precision gain on the second. Results also indicate that companies with more associated news yield higher prediction accuracy. Moreover, headlines contain stronger predictive signals than full articles, suggesting that concise news summaries play an important role in short-term market reactions.
A Novel Wasserstein Quaternion Generative Adversarial Network for Color Image Generation
Jia, Zhigang, Wang, Duan, Wang, Hengkai, Xie, Yajun, Zhao, Meixiang, Zhao, Xiaoyu
Color image generation has a wide range of applications, but the existing generation models ignore the correlation among color channels, which may lead to chromatic aberration problems. In addition, the data distribution problem of color images has not been systematically elaborated and explained, so that there is still the lack of the theory about measuring different color images datasets. In this paper, we define a new quaternion Wasserstein distance and develop its dual theory. To deal with the quaternion linear programming problem, we derive the strong duality form with helps of quaternion convex set separation theorem and quaternion Farkas lemma. With using quaternion Wasserstein distance, we propose a novel Wasserstein quaternion generative adversarial network. Experiments demonstrate that this novel model surpasses both the (quaternion) generative adversarial networks and the Wasserstein generative adversarial network in terms of generation efficiency and image quality.
Beyond Real Weights: Hypercomplex Representations for Stable Quantization
Ahad, Jawad Ibn, Rahman, Maisha, Biswas, Amrijit, Kabir, Muhammad Rafsan, Krambroeckers, Robin, Momen, Sifat, Mohammed, Nabeel, Rahman, Shafin
Multimodal language models (MLLMs) require large parameter capacity to align high-dimensional visual features with linguistic representations, making them computationally heavy and difficult to deploy efficiently. We introduce a progressive reparameterization strategy that compresses these models by gradually replacing dense feed-forward network blocks with compact Parameterized Hypercomplex Multiplication (PHM) layers. A residual interpolation schedule, together with lightweight reconstruction and knowledge distillation losses, ensures that the PHM modules inherit the functional behavior of their dense counterparts during training. This transition yields substantial parameter and FLOP reductions while preserving strong multimodal alignment, enabling faster inference without degrading output quality. We evaluate the approach on multiple vision-language models (VLMs). Our method maintains performance comparable to the base models while delivering significant reductions in model size and inference latency. Progressive PHM substitution thus offers an architecture-compatible path toward more efficient multimodal reasoning and complements existing low-bit quantization techniques.
Fused Gromov-Wasserstein Contrastive Learning for Effective Enzyme-Reaction Screening
Zhou, Gengmo, Yu, Feng, Wang, Wenda, Gao, Zhifeng, Ke, Guolin, Wei, Zhewei, Wang, Zhen
Enzymes are crucial catalysts that enable a wide range of biochemical reactions. Efficiently identifying specific enzymes from vast protein libraries is essential for advancing biocatalysis. Traditional computational methods for enzyme screening and retrieval are time-consuming and resource-intensive. Recently, deep learning approaches have shown promise. However, these methods focus solely on the interaction between enzymes and reactions, overlooking the inherent hierarchical relationships within each domain. To address these limitations, we introduce FGW-CLIP, a novel contrastive learning framework based on optimizing the fused Gromov-Wasserstein distance. FGW-CLIP incorporates multiple alignments, including inter-domain alignment between reactions and enzymes and intra-domain alignment within enzymes and reactions. By introducing a tailored regularization term, our method minimizes the Gromov-Wasserstein distance between enzyme and reaction spaces, which enhances information integration across these domains. Extensive evaluations demonstrate the superiority of FGW-CLIP in challenging enzyme-reaction tasks. On the widely-used EnzymeMap benchmark, FGW-CLIP achieves state-of-the-art performance in enzyme virtual screening, as measured by BEDROC and EF metrics. Moreover, FGW-CLIP consistently outperforms across all three splits of ReactZyme, the largest enzyme-reaction benchmark, demonstrating robust generalization to novel enzymes and reactions. These results position FGW-CLIP as a promising framework for enzyme discovery in complex biochemical settings, with strong adaptability across diverse screening scenarios.