Learning Graphical Models
Nonlinear directed acyclic structure learning with weakly additive noise models
The recently proposed \emph{additive noise model} has advantages over previous structure learning algorithms, when attempting to recover some true data generating mechanism, since it (i) does not assume linearity or Gaussianity and (ii) can recover a unique DAG rather than an equivalence class. However, its original extension to the multivariate case required enumerating all possible DAGs, and for some special distributions, e.g. We present a new approach which combines a PC style search using recent advances in kernel measures of conditional dependence with local searches for additive noise models in substructures of the equivalence class. This results in a more computationally efficient approach that is useful for arbitrary distributions even when additive noise models are invertible. Experiments with synthetic and real data show that this method is more accurate than previous methods when data are nonlinear and/or non-Gaussian.
Discriminative Network Models of Schizophrenia
Schizophrenia is a complex psychiatric disorder that has eluded a characterization in terms of local abnormalities of brain activity, and is hypothesized to affect the collective, emergent working of the brain. We propose a novel data-driven approach to capture emergent features using functional brain networks [Eguiluzet al] extracted from fMRI data, and demonstrate its advantage over traditional region-of-interest (ROI) and local, task-specific linear activation analyzes. Our results suggest that schizophrenia is indeed associated with disruption of global, emergent brain properties related to its functioning as a network, which cannot be explained by alteration of local activation patterns. Moreover, further exploitation of interactions by sparse Markov Random Field classifiers shows clear gain over linear methods, such as Gaussian Naive Bayes and SVM, allowing to reach 86% accuracy (over 50% baseline - random guess), which is quite remarkable given that it is based on a single fMRI experiment using a simple auditory task.
Improving Existing Fault Recovery Policies
Automated recovery from failures is a key component in the management of large data centers. Such systems typically employ a hand-made controller created by an expert. While such controllers capture many important aspects of the recovery process, they are often not systematically optimized to reduce costs such as server downtime. In this paper we explain how to use data gathered from the interactions of the hand-made controller with the system, to create an optimized controller. We suggest learning an indefinite horizon Partially Observable Markov Decision Process, a model for decision making under uncertainty, and solve it using a point-based algorithm.
A Neural Implementation of the Kalman Filter
There is a growing body of experimental evidence to suggest that the brain is capable of approximating optimal Bayesian inference in the face of noisy input stimuli. Despite this progress, the neural underpinnings of this computation are still poorly understood. In this paper we focus on the problem of Bayesian filtering of stochastic time series. In particular we introduce a novel neural network, derived from a line attractor architecture, whose dynamics map directly onto those of the Kalman Filter in the limit where the prediction error is small. When the prediction error is large we show that the network responds robustly to change-points in a way that is qualitatively compatible with the optimal Bayesian model.
Perceptual Multistability as Markov Chain Monte Carlo Inference
While many perceptual and cognitive phenomena are well described in terms of Bayesian inference, the necessary computations are intractable at the scale of real-world tasks, and it remains unclear how the human mind approximates Bayesian inference algorithmically. We explore the proposal that for some tasks, humans use a form of Markov Chain Monte Carlo to approximate the posterior distribution over hidden variables. As a case study, we show how several phenomena of perceptual multistability can be explained as MCMC inference in simple graphical models for low-level vision.
Help or Hinder: Bayesian Models of Social Goal Inference
Everyday social interactions are heavily influenced by our snap judgments about others goals. Even young infants can infer the goals of intentional agents from observing how they interact with objects and other agents in their environment: e.g., that one agent is helping orhindering anothers attempt to get up a hill or open a box. We propose a model for how people can infer these social goals from actions, based on inverse planning in multiagent Markov decision problems (MDPs). The model infers the goal most likely to be driving an agents behavior by assuming the agent acts approximately rationally given environmental constraints and its model of other agents present.
Bayesian Nonparametric Models on Decomposable Graphs
Over recent years Dirichlet processes and the associated Chinese restaurant process (CRP) have found many applications in clustering while the Indian buffet process (IBP) is increasingly used to describe latent feature models. In the clustering case, we associate to each data point a latent allocation variable. These latent variables can share the same value and this induces a partition of the data set. The CRP is a prior distribution on such partitions. In latent feature models, we associate to each data point a potentially infinite number of binary latent variables indicating the possession of some features and the IBP is a prior distribution on the associated infinite binary matrix.
Linearly constrained Bayesian matrix factorization for blind source separation
We present a general Bayesian approach to probabilistic matrix factorization subject to linear constraints. The approach is based on a Gaussian observation model and Gaussian priors with bilinear equality and inequality constraints. We present an efficient Markov chain Monte Carlo inference procedure based on Gibbs sampling. Special cases of the proposed model are Bayesian formulations of non-negative matrix factorization and factor analysis. The method is evaluated on a blind source separation problem.
Bayesian Belief Polarization
Situations in which people with opposing prior beliefs observe the same evidence and then strengthen those existing beliefs are frequently offered as evidence of human irrationality. This phenomenon, termed belief polarization, is typically assumed to be non-normative. We demonstrate, however, that a variety of cases of belief polarization are consistent with a Bayesian approach to belief revision. Simulation results indicate that belief polarization is not only possible but relatively common within the class of Bayesian models that we consider.
Constructing Topological Maps using Markov Random Fields and Loop-Closure Detection
We present a system which constructs a topological map of an environment given a sequence of images. This system includes a novel image similarity score which uses dynamic programming to match images using both the appearance and relative positions of local features simultaneously. Additionally an MRF is constructed to model the probability of loop-closures. A locally optimal labeling is found using Loopy-BP. Finally we outline a method to generate a topological map from loop closure data.