Learning Graphical Models
Super-Resolution Off the Grid
Super-resolution is the problem of recovering a superposition of point sources using bandlimited measurements, which may be corrupted with noise. This signal processing problem arises in numerous imaging problems, ranging from astronomy to biology to spectroscopy, where it is common to take (coarse) Fourier measurements of an object. Of particular interest is in obtaining estimation procedures which are robust to noise, with the following desirable statistical and computational properties: we seek to use coarse Fourier measurements (bounded by some cutoff frequency); we hope to take a (quantifiably) small number of measurements; we desire our algorithm to run quickly. Suppose we have k point sources in d dimensions, where the points are separated by at least from each other (in Euclidean distance). This work provides an algorithm with the following favorable guarantees: The algorithm uses Fourier measurements, whose frequencies are bounded by O(1/) (up to log factors).
On-the-Job Learning with Bayesian Decision Theory Arun Chaganty Department of Computer Science Department of Computer Science Stanford University
Our goal is to deploy a high-accuracy system starting with zero training examples. We consider an on-the-job setting, where as inputs arrive, we use real-time crowdsourcing to resolve uncertainty where needed and output our prediction when confident. As the model improves over time, the reliance on crowdsourcing queries decreases. We cast our setting as a stochastic game based on Bayesian decision theory, which allows us to balance latency, cost, and accuracy objectives in a principled way. Computing the optimal policy is intractable, so we develop an approximation based on Monte Carlo Tree Search. We tested our approach on three datasets--named-entity recognition, sentiment classification, and image classification. On the NER task we obtained more than an order of magnitude reduction in cost compared to full human annotation, while boosting performance relative to the expert provided labels.
Kullback-Leibler Proximal Variational Inference Mohammad Emtiyaz Khan ∗ Pierre Baqué ∗ Ecole Polytechnique Fédérale de Lausanne Ecole Polytechnique Fédérale de Lausanne Lausanne, Switzerland
We propose a new variational inference method based on a proximal framework that uses the Kullback-Leibler (KL) divergence as the proximal term. We make two contributions towards exploiting the geometry and structure of the variational bound. First, we propose a KL proximal-point algorithm and show its equivalence to variational inference with natural gradients (e.g., stochastic variational inference). Second, we use the proximal framework to derive efficient variational algorithms for non-conjugate models. We propose a splitting procedure to separate non-conjugate terms from conjugate ones. We linearize the non-conjugate terms to obtain subproblems that admit a closed-form solution. Overall, our approach converts inference in a non-conjugate model to subproblems that involve inference in well-known conjugate models. We show that our method is applicable to a wide variety of models and can result in computationally efficient algorithms. Applications to real-world datasets show comparable performances to existing methods.
Latent Bayesian melding for integrating individual and population models
In many statistical problems, a more coarse-grained model may be suitable for population-level behaviour, whereas a more detailed model is appropriate for accurate modelling of individual behaviour. This raises the question of how to integrate both types of models. Methods such as posterior regularization follow the idea of generalized moment matching, in that they allow matching expectations between two models, but sometimes both models are most conveniently expressed as latent variable models. We propose latent Bayesian melding, which is motivated by averaging the distributions over populations statistics of both the individual-level and the population-level models under a logarithmic opinion pool framework. In a case study on electricity disaggregation, which is a type of singlechannel blind source separation problem, we show that latent Bayesian melding leads to significantly more accurate predictions than an approach based solely on generalized moment matching.
A Bayesian Framework for Modeling Confidence in Perceptual Decision Making
The degree of confidence in one's choice or decision is a critical aspect of perceptual decision making. Attempts to quantify a decision maker's confidence by measuring accuracy in a task have yielded limited success because confidence and accuracy are typically not equal. In this paper, we introduce a Bayesian framework to model confidence in perceptual decision making. We show that this model, based on partially observable Markov decision processes (POMDPs), is able to predict confidence of a decision maker based only on the data available to the experimenter. We test our model on two experiments on confidence-based decision making involving the well-known random dots motion discrimination task. In both experiments, we show that our model's predictions closely match experimental data. Additionally, our model is also consistent with other phenomena such as the hard-easy effect in perceptual decision making.
Scalable Adaptation of State Complexity for Nonparametric Hidden Markov Models
Bayesian nonparametric hidden Markov models are typically learned via fixed truncations of the infinite state space or local Monte Carlo proposals that make small changes to the state space. We develop an inference algorithm for the sticky hierarchical Dirichlet process hidden Markov model that scales to big datasets by processing a few sequences at a time yet allows rapid adaptation of the state space cardinality. Unlike previous point-estimate methods, our novel variational bound penalizes redundant or irrelevant states and thus enables optimization of the state space. Our birth proposals use observed data statistics to create useful new states that escape local optima. Merge and delete proposals remove ineffective states to yield simpler models with more affordable future computations. Experiments on speaker diarization, motion capture, and epigenetic chromatin datasets discover models that are more compact, more interpretable, and better aligned to ground truth segmentations than competitors. We have released an open-source Python implementation which can parallelize local inference steps across sequences.
Market Scoring Rules Act As Opinion Pools For Risk-Averse Agents
A market scoring rule (MSR) - a popular tool for designing algorithmic prediction markets - is an incentive-compatible mechanism for the aggregation of probabilistic beliefs from myopic risk-neutral agents. In this paper, we add to a growing body of research aimed at understanding the precise manner in which the price process induced by a MSR incorporates private information from agents who deviate from the assumption of risk-neutrality. We first establish that, for a myopic trading agent with a risk-averse utility function, a MSR satisfying mild regularity conditions elicits the agent's risk-neutral probability conditional on the latest market state rather than her true subjective probability. Hence, we show that a MSR under these conditions effectively behaves like a more traditional method of belief aggregation, namely an opinion pool, for agents' true probabilities.
Learning Bayesian Networks with Thousands of Variables
We present a method for learning Bayesian networks from data sets containing thousands of variables without the need for structure constraints. Our approach is made of two parts. The first is a novel algorithm that effectively explores the space of possible parent sets of a node. It guides the exploration towards the most promising parent sets on the basis of an approximated score function that is computed in constant time. The second part is an improvement of an existing ordering-based algorithm for structure optimization. The new algorithm provably achieves a higher score compared to its original formulation. Our novel approach consistently outperforms the state of the art on very large data sets.
Fast and Accurate Inference of Plackett-Luce Models
We show that the maximum-likelihood (ML) estimate of models derived from Luce's choice axiom (e.g., the Plackett-Luce model) can be expressed as the stationary distribution of a Markov chain. This conveys insight into several recently proposed spectral inference algorithms. We take advantage of this perspective and formulate a new spectral algorithm that is significantly more accurate than previous ones for the Plackett-Luce model. With a simple adaptation, this algorithm can be used iteratively, producing a sequence of estimates that converges to the ML estimate. The ML version runs faster than competing approaches on a benchmark of five datasets. Our algorithms are easy to implement, making them relevant for practitioners at large.
A Framework for Individualizing Predictions of Disease Trajectories by Exploiting Multi-Resolution Structure
For many complex diseases, there is a wide variety of ways in which an individual can manifest the disease. The challenge of personalized medicine is to develop tools that can accurately predict the trajectory of an individual's disease, which can in turn enable clinicians to optimize treatments. We represent an individual's disease trajectory as a continuous-valued continuous-time function describing the severity of the disease over time. We propose a hierarchical latent variable model that individualizes predictions of disease trajectories.