Learning Graphical Models
A resource-constrained stochastic scheduling algorithm for homeless street outreach and gleaning edible food
Artman, Conor M., Mate, Aditya, Nwankwo, Ezinne, Heching, Aliza, Idé, Tsuyoshi, Jiří\, null, Navrátil, null, Shanmugam, Karthikeyan, Sun, Wei, Varshney, Kush R., Goldkind, Lauri, Kroch, Gidi, Sawyer, Jaclyn, Watson, Ian
We developed a common algorithmic solution addressing the problem of resource-constrained outreach encountered by social change organizations with different missions and operations: Breaking Ground -- an organization that helps individuals experiencing homelessness in New York transition to permanent housing and Leket -- the national food bank of Israel that rescues food from farms and elsewhere to feed the hungry. Specifically, we developed an estimation and optimization approach for partially-observed episodic restless bandits under $k$-step transitions. The results show that our Thompson sampling with Markov chain recovery (via Stein variational gradient descent) algorithm significantly outperforms baselines for the problems of both organizations. We carried out this work in a prospective manner with the express goal of devising a flexible-enough but also useful-enough solution that can help overcome a lack of sustainable impact in data science for social good.
Structured Evaluation of Synthetic Tabular Data
Yang, Scott Cheng-Hsin, Eaves, Baxter, Schmidt, Michael, Swanson, Ken, Shafto, Patrick
Tabular data is common yet typically incomplete, small in volume, and access-restricted due to privacy concerns. Synthetic data generation offers potential solutions. Many metrics exist for evaluating the quality of synthetic tabular data; however, we lack an objective, coherent interpretation of the many metrics. To address this issue, we propose an evaluation framework with a single, mathematical objective that posits that the synthetic data should be drawn from the same distribution as the observed data. Through various structural decomposition of the objective, this framework allows us to reason for the first time the completeness of any set of metrics, as well as unifies existing metrics, including those that stem from fidelity considerations, downstream application, and model-based approaches. Moreover, the framework motivates model-free baselines and a new spectrum of metrics. We evaluate structurally informed synthesizers and synthesizers powered by deep learning. Using our structured framework, we show that synthetic data generators that explicitly represent tabular structure outperform other methods, especially on smaller datasets.
Active Classification based on Value of Classifier
Modern classification tasks usually involve many class labels and can be informed by a broad range of features. Many of these tasks are tackled by constructing a set of classifiers, which are then applied at test time and then pieced together in a fixed procedure determined in advance or at training time. We present an active classification process at the test time, where each classifier in a large ensemble is viewed as a potential observation that might inform our classification process. Observations are then selected dynamically based on previous observations, using a value-theoretic computation that balances an estimate of the expected classification gain from each observation as well as its computational cost. The expected classification gain is computed using a probabilistic model that uses the outcome from previous observations. This active classification process is applied at test time for each individual test instance, resulting in an efficient instance-specific decision path. We demonstrate the benefit of the active scheme on various real-world datasets, and show that it can achieve comparable or even higher classification accuracy at a fraction of the computational costs of traditional methods.
Dynamical segmentation of single trials from population neural data
Simultaneous recordings of many neurons embedded within a recurrentlyconnected cortical network may provide concurrent views into the dynamical processes of that network, and thus its computational function. In principle, these dynamics might be identified by purely unsupervised, statistical means. Here, we show that a Hidden Switching Linear Dynamical Systems (HSLDS) model-- in which multiple linear dynamical laws approximate a nonlinear and potentially non-stationary dynamical process--is able to distinguish different dynamical regimes within single-trial motor cortical activity associated with the preparation and initiation of hand movements. The regimes are identified without reference to behavioural or experimental epochs, but nonetheless transitions between them correlate strongly with external events whose timing may vary from trial to trial. The HSLDS model also performs better than recent comparable models in predicting the firing rate of an isolated neuron based on the firing rates of others, suggesting that it captures more of the "shared variance" of the data. Thus, the method is able to trace the dynamical processes underlying the coordinated evolution of network activity in a way that appears to reflect its computational role.
28fc2782ea7ef51c1104ccf7b9bea13d-Paper.pdf
In this paper, we derive a method to refine a Bayes network diagnostic model by exploiting constraints implied by expert decisions on test ordering. At each step, the expert executes an evidence gathering test, which suggests the test's relative diagnostic value. We demonstrate that consistency with an expert's test selection leads to non-convex constraints on the model parameters. We incorporate these constraints by augmenting the network with nodes that represent the constraint likelihoods. Gibbs sampling, stochastic hill climbing and greedy search algorithms are proposed to find a MAP estimate that takes into account test ordering constraints and any data available. We demonstrate our approach on diagnostic sessions from a manufacturing scenario.
Two is better than one: distinct roles for familiarity and recollection in retrieving palimpsest memories
Storing a new pattern in a palimpsest memory system comes at the cost of interfering with the memory traces of previously stored items. Knowing the age of a pattern thus becomes critical for recalling it faithfully. This implies that there should be a tight coupling between estimates of age, as a form of familiarity, and the neural dynamics of recollection, something which current theories omit. Using a normative model of autoassociative memory, we show that a dual memory system, consisting of two interacting modules for familiarity and recollection, has best performance for both recollection and recognition. This finding provides a new window onto actively contentious psychological and neural aspects of recognition memory.
Spectral Methods for Learning Multivariate Latent Tree Structure
This work considers the problem of learning the structure of multivariate linear tree models, which include a variety of directed tree graphical models with continuous, discrete, and mixed latent variables such as linear-Gaussian models, hidden Markov models, Gaussian mixture models, and Markov evolutionary trees. The setting is one where we only have samples from certain observed variables in the tree, and our goal is to estimate the tree structure (i.e., the graph of how the underlying hidden variables are connected to each other and to the observed variables). We propose the Spectral Recursive Grouping algorithm, an efficient and simple bottom-up procedure for recovering the tree structure from independent samples of the observed variables. Our finite sample size bounds for exact recovery of the tree structure reveal certain natural dependencies on underlying statistical and structural properties of the underlying joint distribution. Furthermore, our sample complexity guarantees have no explicit dependence on the dimensionality of the observed variables, making the algorithm applicable to many high-dimensional settings. At the heart of our algorithm is a spectral quartet test for determining the relative topology of a quartet of variables from second-order statistics.
Periodic Finite State Controllers for Efficient POMDP and DEC-POMDP Planning
Applications such as robot control and wireless communication require planning under uncertainty. Partially observable Markov decision processes (POMDPs) plan policies for single agents under uncertainty and their decentralized versions (DEC-POMDPs) find a policy for multiple agents. The policy in infinite-horizon POMDP and DEC-POMDP problems has been represented as finite state controllers(FSCs). We introduce a novel class of periodic FSCs, composed of layers connected only to the previous and next layer. Our periodic FSC method finds a deterministic finite-horizon policy and converts it to an initial periodic infinitehorizon policy. This policy is optimized by a new infinite-horizon algorithm to yield deterministic periodic policies, and by a new expectation maximization algorithm to yield stochastic periodic policies. Our method yields better results than earlier planning methods and can compute larger solutions than with regular FSCs.
Analytical Results for the Error in Filtering of Gaussian Processes
Bayesian filtering of stochastic stimuli has received a great deal of attention recently. It has been applied to describe the way in which biological systems dynamically represent and make decisions about the environment. There have been no exact results for the error in the biologically plausible setting of inference on point process, however. We present an exact analysis of the evolution of the meansquared error in a state estimation task using Gaussian-tuned point processes as sensors. This allows us to study the dynamics of the error of an optimal Bayesian decoder, providing insights into the limits obtainable in this task. This is done for Markovian and a class of non-Markovian Gaussian processes. We find that there is an optimal tuning width for which the error is minimized. This leads to a characterization of the optimal encoding for the setting as a function of the statistics of the stimulus, providing a mathematically sound primer for an ecological theory of sensory processing.