Markov Models
Latent Bayesian melding for integrating individual and population models
In many statistical problems, a more coarse-grained model may be suitable for population-level behaviour, whereas a more detailed model is appropriate for accurate modelling of individual behaviour. This raises the question of how to integrate both types of models. Methods such as posterior regularization follow the idea of generalized moment matching, in that they allow matching expectations between two models, but sometimes both models are most conveniently expressed as latent variable models. We propose latent Bayesian melding, which is motivated by averaging the distributions over populations statistics of both the individual-level and the population-level models under a logarithmic opinion pool framework. In a case study on electricity disaggregation, which is a type of singlechannel blind source separation problem, we show that latent Bayesian melding leads to significantly more accurate predictions than an approach based solely on generalized moment matching.
A Bayesian Framework for Modeling Confidence in Perceptual Decision Making
The degree of confidence in one's choice or decision is a critical aspect of perceptual decision making. Attempts to quantify a decision maker's confidence by measuring accuracy in a task have yielded limited success because confidence and accuracy are typically not equal. In this paper, we introduce a Bayesian framework to model confidence in perceptual decision making. We show that this model, based on partially observable Markov decision processes (POMDPs), is able to predict confidence of a decision maker based only on the data available to the experimenter. We test our model on two experiments on confidence-based decision making involving the well-known random dots motion discrimination task. In both experiments, we show that our model's predictions closely match experimental data. Additionally, our model is also consistent with other phenomena such as the hard-easy effect in perceptual decision making.
Scalable Adaptation of State Complexity for Nonparametric Hidden Markov Models
Bayesian nonparametric hidden Markov models are typically learned via fixed truncations of the infinite state space or local Monte Carlo proposals that make small changes to the state space. We develop an inference algorithm for the sticky hierarchical Dirichlet process hidden Markov model that scales to big datasets by processing a few sequences at a time yet allows rapid adaptation of the state space cardinality. Unlike previous point-estimate methods, our novel variational bound penalizes redundant or irrelevant states and thus enables optimization of the state space. Our birth proposals use observed data statistics to create useful new states that escape local optima. Merge and delete proposals remove ineffective states to yield simpler models with more affordable future computations. Experiments on speaker diarization, motion capture, and epigenetic chromatin datasets discover models that are more compact, more interpretable, and better aligned to ground truth segmentations than competitors. We have released an open-source Python implementation which can parallelize local inference steps across sequences.
GP Kernels for Cross-Spectrum Analysis David E. Carlson, 2 Lawrence Carin
Multi-output Gaussian processes provide a convenient framework for multi-task problems. An illustrative and motivating example of a multi-task problem is multi-region electrophysiological time-series data, where experimentalists are interested in both power and phase coherence between channels. Recently, Wilson and Adams (2013) proposed the spectral mixture (SM) kernel to model the spectral density of a single task in a Gaussian process framework. In this paper, we develop a novel covariance kernel for multiple outputs, called the cross-spectral mixture (CSM) kernel. This new, flexible kernel represents both the power and phase relationship between multiple observation channels. We demonstrate the expressive capabilities of the CSM kernel through implementation of a Bayesian hidden Markov model, where the emission distribution is a multi-output Gaussian process with a CSM covariance kernel. Results are presented for measured multi-region electrophysiological data.
Sampling from Probabilistic Submodular Models
Submodular and supermodular functions have found wide applicability in machine learning, capturing notions such as diversity and regularity, respectively. These notions have deep consequences for optimization, and the problem of (approximately) optimizing submodular functions has received much attention. However, beyond optimization, these notions allow specifying expressive probabilistic models that can be used to quantify predictive uncertainty via marginal inference. Prominent, well-studied special cases include Ising models and determinantal point processes, but the general class of log-submodular and log-supermodular models is much richer and little studied. In this paper, we investigate the use of Markov chain Monte Carlo sampling to perform approximate inference in general log-submodular and log-supermodular models. In particular, we consider a simple Gibbs sampling procedure, and establish two sufficient conditions, the first guaranteeing polynomial-time, and the second fast (O(n log n)) mixing. We also evaluate the efficiency of the Gibbs sampler on three examples of such models, and compare against a recently proposed variational approach.
Training Restricted Boltzmann Machines via the Thouless-Anderson-Palmer Free Energy
Restricted Boltzmann machines are undirected neural networks which have been shown to be effective in many applications, including serving as initializations for training deep multi-layer neural networks. One of the main reasons for their success is the existence of efficient and practical stochastic algorithms, such as contrastive divergence, for unsupervised training. We propose an alternative deterministic iterative procedure based on an improved mean field method from statistical physics known as the Thouless-Anderson-Palmer approach. We demonstrate that our algorithm provides performance equal to, and sometimes superior to, persistent contrastive divergence, while also providing a clear and easy to evaluate objective function. We believe that this strategy can be easily generalized to other models as well as to more accurate higher-order approximations, paving the way for systematic improvements in training Boltzmann machines with hidden units.
Time-Sensitive Recommendation From Recurrent User Activities Nan Du
By making personalized suggestions, a recommender system is playing a crucial role in improving the engagement of users in modern web-services. However, most recommendation algorithms do not explicitly take into account the temporal behavior and the recurrent activities of users. Two central but less explored questions are how to recommend the most desirable item at the right moment, and how to predict the next returning time of a user to a service. To address these questions, we propose a novel framework which connects self-exciting point processes and low-rank models to capture the recurrent temporal patterns in a large collection of user-item consumption pairs. We show that the parameters of the model can be estimated via a convex optimization, and furthermore, we develop an efficient algorithm that maintains O(1/ɛ) convergence rate, scales up to problems with millions of user-item pairs and hundreds of millions of temporal events. Compared to other state-of-the-arts in both synthetic and real datasets, our model achieves superb predictive performance in the two time-sensitive recommendation tasks. Finally, we point out that our formulation can incorporate other extra context information of users, such as profile, textual and spatial features.
Dependent Multinomial Models Made Easy: Stick Breaking with the Pólya-Gamma Augmentation
Many practical modeling problems involve discrete data that are best represented as draws from multinomial or categorical distributions. For example, nucleotides in a DNA sequence, children's names in a given state and year, and text documents are all commonly modeled with multinomial distributions. In all of these cases, we expect some form of dependency between the draws: the nucleotide at one position in the DNA strand may depend on the preceding nucleotides, children's names are highly correlated from year to year, and topics in text may be correlated and dynamic. These dependencies are not naturally captured by the typical Dirichlet-multinomial formulation. Here, we leverage a logistic stick-breaking representation and recent innovations in Pólya-gamma augmentation to reformulate the multinomial distribution in terms of latent variables with jointly Gaussian likelihoods, enabling us to take advantage of a host of Bayesian inference techniques for Gaussian models with minimal overhead.
Infinite Factorial Dynamical Model Max Planck Institute for Department of Computer Science Software Systems
We propose the infinite factorial dynamic model (iFDM), a general Bayesian nonparametric model for source separation. Our model builds on the Markov Indian buffet process to consider a potentially unbounded number of hidden Markov chains (sources) that evolve independently according to some dynamics, in which the state space can be either discrete or continuous. For posterior inference, we develop an algorithm based on particle Gibbs with ancestor sampling that can be efficiently applied to a wide range of source separation problems. We evaluate the performance of our iFDM on four well-known applications: multitarget tracking, cocktail party, power disaggregation, and multiuser detection. Our experimental results show that our approach for source separation does not only outperform previous approaches, but it can also handle problems that were computationally intractable for existing approaches.
On Multiplicative Integration with Recurrent Neural Networks
We introduce a general and simple structural design called "Multiplicative Integration" (MI) to improve recurrent neural networks (RNNs). MI changes the way in which information from difference sources flows and is integrated in the computational building block of an RNN, while introducing almost no extra parameters. The new structure can be easily embedded into many popular RNN models, including LSTMs and GRUs. We empirically analyze its learning behaviour and conduct evaluations on several tasks using different RNN models. Our experimental results demonstrate that Multiplicative Integration can provide a substantial performance boost over many of the existing RNN models.