Bayesian Learning
Variational Implicit Processes
Ma, Chao, Li, Yingzhen, Hernรกndez-Lobato, Josรฉ Miguel
This paper introduces the variational implicit processes (VIPs), a Bayesian nonparametric method based on a class of highly flexible priors over functions. Similar to Gaussian processes (GPs), in implicit processes (IPs), an implicit multivariate prior (data simulators, Bayesian neural networks, etc.) is placed over any finite collections of random variables. A novel and efficient variational inference algorithm for IPs is derived using wake-sleep updates, which gives analytic solutions and allows scalable hyper-parameter learning with stochastic optimization. Experiments on real-world regression datasets demonstrate that VIPs return better uncertainty estimates and superior performance over existing inference methods for GPs and Bayesian neural networks. With a Bayesian LSTM as the implicit prior, the proposed approach achieves state-of-the-art results on predicting power conversion efficiency of molecules based on raw chemical formulas.
Randomized Value Functions via Multiplicative Normalizing Flows
Touati, Ahmed, Satija, Harsh, Romoff, Joshua, Pineau, Joelle, Vincent, Pascal
Randomized value functions offer a promising approach towards the challenge of efficient exploration in complex environments with high dimensional state and action spaces. Unlike traditional point estimate methods, randomized value functions maintain a posterior distribution over action-space values. This prevents the agent's behavior policy from prematurely exploiting early estimates and falling into local optima. In this work, we leverage recent advances in variational Bayesian neural networks and combine these with traditional Deep Q-Networks (DQN) to achieve randomized value functions for high-dimensional domains. In particular, we augment DQN with multiplicative normalizing flows in order to track an approximate posterior distribution over its parameters. This allows the agent to perform approximate Thompson sampling in a computationally efficient manner via stochastic gradient methods. We demonstrate the benefits of our approach through an empirical comparison in high dimensional environments.
Doubly Robust Bayesian Inference for Non-Stationary Streaming Data with $\beta$-Divergences
Knoblauch, Jeremias, Jewson, Jack, Damoulas, Theodoros
We present the very first robust Bayesian Online Changepoint Detection algorithm through General Bayesian Inference (GBI) with $\beta$-divergences. The resulting inference procedure is doubly robust for both the predictive and the changepoint (CP) posterior, with linear time and constant space complexity. We provide a construction for exponential models and demonstrate it on the Bayesian Linear Regression model. In so doing, we make two additional contributions: Firstly, we make GBI scalable using Structural Variational approximations that are exact as $\beta \to 0$. Secondly, we give a principled way of choosing the divergence parameter $\beta$ by minimizing expected predictive loss on-line. We offer the state of the art and improve the False Discovery Rate of CPs by more than 80% on real world data.
Degrees of Freedom and Model Selection for kmeans Clustering
This paper investigates the problem of model selection for kmeans clustering, based on conservative estimates of the model degrees of freedom. An extension of Stein's lemma, which is used in unbiased risk estimation, is used to obtain an expression which allows one to approximate the degrees of freedom. Empirically based estimates of this approximation are obtained. The degrees of freedom estimates are then used within the popular Bayesian Information Criterion to perform model selection. The proposed estimation procedure is validated in a thorough simulation study, and the robustness is assessed through relaxations of the modelling assumptions and on data from real applications. Comparisons with popular existing techniques suggest that this approach performs extremely well when the modelling assumptions
Evidential Deep Learning to Quantify Classification Uncertainty
Sensoy, Murat, Kandemir, Melih, Kaplan, Lance
Deterministic neural nets have been shown to learn effective predictors on a wide range of machine learning problems. However, as the standard approach is to train the network to minimize a prediction loss, the resultant model remains ignorant to its prediction confidence. Orthogonally to Bayesian neural nets that indirectly infer prediction uncertainty through weight uncertainties, we propose explicit modeling of the same using the theory of subjective logic. By placing a Dirichlet prior on the softmax output, we treat predictions of a neural net as subjective opinions and learn the function that collects the evidence leading to these opinions by a deterministic neural net from data. The resultant predictor for a multi-class classification problem is another Dirichlet distribution whose parameters are set by the continuous output of a neural net. We provide a preliminary analysis on how the peculiarities of our new loss function drive improved uncertainty estimation. We observe that our method achieves unprecedented success on detection of out-of-sample queries and endurance against adversarial perturbations.
Cycle-Consistent Adversarial Learning as Approximate Bayesian Inference
Tiao, Louis C., Bonilla, Edwin V., Ramos, Fabio
We formalize the problem of learning interdomain correspondences in the absence of paired data as Bayesian inference in a latent variable model (LVM), where one seeks the underlying hidden representations of entities from one domain as entities from the other domain. First, we introduce implicit latent variable models, where the prior over hidden representations can be specified flexibly as an implicit distribution. Next, we develop a new variational inference (VI) algorithm for this model based on minimization of the symmetric Kullback-Leibler (KL) divergence between a variational joint and the exact joint distribution. Lastly, we demonstrate that the state-of-the-art cycle-consistent adversarial learning (CYCLEGAN) models can be derived as a special case within our proposed VI framework, thus establishing its connection to approximate Bayesian inference methods.
Semiparametric Classification of Forest Graphical Models
Dorn, Mary Frances, Moscovich, Amit, Nadler, Boaz, Spiegelman, Clifford
We propose a new semiparametric approach to binary classification that exploits the modeling flexibility of sparse graphical models. Specifically, we assume that each class can be represented by a forest-structured graphical model. Under this assumption, the optimal classifier is linear in the log of the one- and two-dimensional marginal densities. Our proposed procedure non-parametrically estimates the univariate and bivariate marginal densities, maps each sample to the logarithm of these estimated densities and constructs a linear SVM in the transformed space. We prove convergence of the resulting classifier to an oracle SVM classifier and give finite sample bounds on its excess risk. Experiments with simulated and real data indicate that the resulting classifier is competitive with several popular methods across a range of applications.
MRPC: An R package for accurate inference of causal graphs
Badsha, Md. Bahadur, Martin, Evan A, Fu, Audrey Qiuyan
We present MRPC, an R package that learns causal graphs with improved accuracy over existing packages, such as pcalg and bnlearn. Our algorithm builds on the powerful PC algorithm, the canonical algorithm in computer science for learning directed acyclic graphs. The improvement in accuracy results from online control of the false discovery rate (FDR) that reduces false positive edges, a more accurate approach to identifying v-structures (i.e., $T_1 \rightarrow T_2 \leftarrow T_3$), and robust estimation of the correlation matrix among nodes. For genomic data that contain genotypes and gene expression for each sample, MRPC incorporates the principle of Mendelian randomization to orient the edges. Our package can be applied to continuous and discrete data.
Deep Gaussian Processes with Convolutional Kernels
Kumar, Vinayak, Singh, Vaibhav, Srijith, P. K., Damianou, Andreas
Deep Gaussian processes (DGPs) provide a Bayesian non-parametric alternative to standard parametric deep learning models. A DGP is formed by stacking multiple GPs resulting in a well-regularized composition of functions. The Bayesian framework that equips the model with attractive properties, such as implicit capacity control and predictive uncertainty, makes it at the same time challenging to combine with a convolutional structure. This has hindered the application of DGPs in computer vision tasks, an area where deep parametric models (i.e. CNNs) have made breakthroughs. Standard kernels used in DGPs such as radial basis functions (RBFs) are insufficient for handling pixel variability in raw images. In this paper, we build on the recent convolutional GP to develop Convolutional DGP (CDGP) models which effectively capture image level features through the use of convolution kernels, therefore opening up the way for applying DGPs to computer vision tasks. Our model learns local spatial influence and outperforms strong GP based baselines on multi-class image classification. We also consider various constructions of convolution kernel over the image patches, analyze the computational trade-offs and provide an efficient framework for convolutional DGP models. The experimental results on image data such as MNIST, rectangles-image, CIFAR10 and Caltech101 demonstrate the effectiveness of the proposed approaches.
A Primer on Causal Analysis
Lattimore, Finnian, Ong, Cheng Soon
We provide a conceptual map to navigate causal analysis problems. Focusing on the case of discrete random variables, we consider the case of causal effect estimation from observational data. The presented approaches apply also to continuous variables, but the issue of estimation becomes more complex. We then introduce the four schools of thought for causal analysis