Bayesian optimization (BO) is a powerful class of algorithms for optimizing expensive black-box functions, but designing effective BO algorithms remains a manual, expertise-driven task. Recent advancements in Large Language Models (LLMs) have opened new avenues for automating scientific discovery, including the automatic design of optimization algorithms. While prior work has used LLMs within optimization loops or to generate non-BO algorithms, we tackle a new challenge: Using LLMs to automatically generate full BO algorithm code. Our framework uses an evolution strategy to guide an LLM in generating Python code that preserves the key components of BO algorithms: An initial design, a surrogate model, and an acquisition function. The LLM is prompted to produce multiple candidate algorithms, which are evaluated on the established Black-Box Optimization Benchmarking (BBOB) test suite from the COmparing Continuous Optimizers (COCO) platform. Based on their performance, top candidates are selected, combined, and mutated via controlled prompt variations, enabling iterative refinement. Despite no additional fine-tuning, the LLM-generated algorithms outperform state-of-the-art BO baselines in 19 (out of 24) BBOB functions in dimension 5 and generalize well to higher dimensions, and different tasks (from the Bayesmark framework). This work demonstrates that LLMs can serve as algorithmic co-designers, offering a new paradigm for automating BO development and accelerating the discovery of novel algorithmic combinations. The source code is provided at https://github.com/Ewendawi/LLaMEA-BO.

Heuristic design with large language models (LLMs) has emerged as a promising approach for tackling combinatorial optimization problems (COPs). However, existing approaches often rely on manually predefined evolutionary computation (EC) optimizers and single-task training schemes, which may constrain the exploration of diverse heuristic algorithms and hinder the generalization of the resulting heuristics. To address these issues, we propose Meta-Optimization of Heuristics (MoH), a novel framework that operates at the optimizer level, discovering effective optimizers through the principle of meta-learning. Specifically, MoH leverages LLMs to iteratively refine a meta-optimizer that autonomously constructs diverse optimizers through (self-)invocation, thereby eliminating the reliance on a predefined EC optimizer. These constructed optimizers subsequently evolve heuristics for downstream tasks, enabling broader heuristic exploration. Moreover, MoH employs a multi-task training scheme to promote its generalization capability. Experiments on classic COPs demonstrate that MoH constructs an effective and interpretable meta-optimizer, achieving state-of-the-art performance across various downstream tasks, particularly in cross-size settings.

Multi-objective optimization (MOO) exists extensively in machine learning, and aims to find a set of Pareto-optimal solutions, called the Pareto front, e.g., it is fundamental for multiple avenues of research in federated learning (FL). Pareto-Front Learning (PFL) is a powerful method implemented using Hypernetworks (PHNs) to approximate the Pareto front. This method enables the acquisition of a mapping function from a given preference vector to the solutions on the Pareto front. However, most existing PFL approaches still face two challenges: (a) sampling rays in high-dimensional spaces; (b) failing to cover the entire Pareto Front which has a convex shape. Here, we introduce a novel PFL framework, called as PHN-HVVS, which decomposes the design space into Voronoi grids and deploys a genetic algorithm (GA) for Voronoi grid partitioning within high-dimensional space. We put forward a new loss function, which effectively contributes to more extensive coverage of the resultant Pareto front and maximizes the HV Indicator. Experimental results on multiple MOO machine learning tasks demonstrate that PHN-HVVS outperforms the baselines significantly in generating Pareto front. Also, we illustrate that PHN-HVVS advances the methodologies of several recent problems in the FL field. The code is available at https://github.com/buptcmm/phnhvvs}{https://github.com/buptcmm/phnhvvs.

Efficient energy management in prosumer households is key to alleviating grid stress in an energy transition marked by electric vehicles (EV), renewable energies and battery storage. However, it is unclear how households optimize prosumer EV charging. Here we study real-world data from 90 households on fixed-rate electricity tariffs in German-speaking countries to investigate the potential of Deep Reinforcement Learning (DRL) and other control approaches (Rule-Based, Model Predictive Control) to manage the dynamic and uncertain environment of Home Energy Management (HEM) and optimize household charging patterns. The DRL agent efficiently aligns charging of EV and battery storage with photovoltaic (PV) surplus. We find that frequent EV charging transactions, early EV connections and PV surplus increase optimization potential. A detailed analysis of nine households (1 hour resolution, 1 year) demonstrates that high battery capacity facilitates self optimization; in this case further algorithmic control shows little value. In cases with relatively low battery capacity, algorithmic control with DRL improves energy management and cost savings by a relevant margin. This result is further corroborated by our simulation of a synthetic household. We conclude that prosumer households with optimization potential would profit from DRL, thus benefiting also the full electricity system and its decarbonization.

According to the World Health Organization (WHO), over 2.3 million women were diagnosed with breast cancer in 2020, making it the most diagnosed cancer worldwide and the leading cause of cancer-related deaths among women (WHO, 2021). The incidence of breast cancer is rising by around 3% per year, with higher mortality rates observed in lower-income countries due to limited access to early screening and treatment. In wealthier nations, 1 in 12 women are diagnosed with breast cancer, whereas in lower-income countries, the rate is 1 in 27. More concerning is the disparity in mortality--1 in 48 women die from breast cancer in low-income countries compared to 1 in 71 in high-income countries (WHO, 2022). In sub-Saharan Africa, breast cancer now has the highest mortality rate among all cancers affecting women, surpassing cervical cancer.

Designing regulatory DNA sequences that achieve precise cell-type-specific gene expression is crucial for advancements in synthetic biology, gene therapy and precision medicine. Although transformer-based language models (LMs) can effectively capture patterns in regulatory DNA, their generative approaches often struggle to produce novel sequences with reliable cell-specific activity. Here, we introduce Ctrl-DNA, a novel constrained reinforcement learning (RL) framework tailored for designing regulatory DNA sequences with controllable cell-type specificity. By formulating regulatory sequence design as a biologically informed constrained optimization problem, we apply RL to autoregressive genomic LMs, enabling the models to iteratively refine sequences that maximize regulatory activity in targeted cell types while constraining off-target effects. Our evaluation on human promoters and enhancers demonstrates that Ctrl-DNA consistently outperforms existing generative and RL-based approaches, generating high-fitness regulatory sequences and achieving state-of-the-art cell-type specificity. Moreover, Ctrl-DNA-generated sequences capture key cell-type-specific transcription factor binding sites (TFBS), short DNA motifs recognized by regulatory proteins that control gene expression, demonstrating the biological plausibility of the generated sequences.

The ultimate goal of multi-objective optimization (MO) is to assist human decision-makers (DMs) in identifying solutions of interest (SOI) that optimally reconcile multiple objectives according to their preferences. Yet, current PBEMO approaches are prone to be inefficient and misaligned with the DM's true aspirations, especially when inadvertently exploiting mis-calibrated reward models. This is further exacerbated when considering the stochastic nature of human feedback. This paper proposes a novel framework that navigates MO to SOI by directly leveraging human feedback without being restricted by a predefined reward model nor cumbersome model selection. Specifically, we developed a clustering-based stochastic dueling bandits algorithm that strategically scales well to high-dimensional dueling bandits, and achieves a regret of \mathcal{O}(K 2\log T), where K is the number of clusters and T is the number of rounds.

As part of the effort to understand how the brain learns, ongoing research seeks to combine biological knowledge with current artificial intelligence (AI) modeling in an attempt to find an efficient biologically plausible learning scheme. Current models often use a cortical-like combination of bottom-up (BU) and top-down (TD) processing, where the TD part carries feedback signals for learning. However, in the visual cortex, the TD pathway plays a second major role in visual attention, by guiding the visual process toward locations and tasks of interest. A biological model should therefore integrate both learning and visual guidance. We introduce a model that uses a cortical-like combination of BU and TD processing that naturally integrates the two major functions of the TD stream.

The omnipresence of NP-hard combinatorial optimization problems (COPs) compels domain experts to engage in trial-and-error heuristic design. The long-standing endeavor of design automation has gained new momentum with the rise of large language models (LLMs). This paper introduces Language Hyper-Heuristics (LHHs), an emerging variant of Hyper-Heuristics that leverages LLMs for heuristic generation, featuring minimal manual intervention and open-ended heuristic spaces. To empower LHHs, we present Reflective Evolution (ReEvo), a novel integration of evolutionary search for efficiently exploring the heuristic space, and LLM reflections to provide verbal gradients within the space.

Solving NP-hard combinatorial optimization problems (COPs) (e.g., traveling salesman problems (TSPs) and capacitated vehicle routing problems (CVRPs)) in practice traditionally involves handcrafting heuristics or specifying a search space for finding effective heuristics. The main challenges from these approaches, however, are the sheer amount of domain knowledge and implementation efforts required from human experts. Recently, significant progress has been made to address these challenges, particularly by using large language models (LLMs) to design heuristics within some predetermined generalized algorithmic framework (GAF, e.g., ant colony optimization and guided local search) for building key functions/components (e.g., a priori information on how promising it is to include each edge in a solution for TSP and CVRP). Although existing methods leveraging this idea have shown to yield impressive optimization performance, they are not fully end-to-end and still require considerable manual interventions. In this paper, we propose a novel end-to-end framework, named RedAHD, that enables these LLM-based heuristic design methods to operate without the need of GAFs. More specifically, RedAHD employs LLMs to automate the process of reduction, i.e., transforming the COP at hand into similar COPs that are better-understood, from which LLM-based heuristic design methods can design effective heuristics for directly solving the transformed COPs and, in turn, indirectly solving the original COP. Our experimental results, evaluated on six COPs, show that RedAHD is capable of designing heuristics with competitive or improved results over the state-of-the-art methods with minimal human involvement.