Hyper-parameters (HPs) are an important part of machine learning (ML) model development and can greatly influence performance. This paper studies their behavior for three algorithms: Extreme Gradient Boosting (XGB), Random Forest (RF), and Feedforward Neural Network (FFNN) with structured data. Our empirical investigation examines the qualitative behavior of model performance as the HPs vary, quantifies the importance of each HP for different ML algorithms, and stability of the performance near the optimal region. Based on the findings, we propose a set of guidelines for efficient HP tuning by reducing the search space.

Threshold Autoregressive (TAR) models have been widely used by statisticians for non-linear time series forecasting during the past few decades, due to their simplicity and mathematical properties. On the other hand, in the forecasting community, general-purpose tree-based regression algorithms (forests, gradient-boosting) have become popular recently due to their ease of use and accuracy. In this paper, we explore the close connections between TAR models and regression trees. These enable us to use the rich methodology from the literature on TAR models to define a hierarchical TAR model as a regression tree that trains globally across series, which we call SETAR-Tree. In contrast to the general-purpose tree-based models that do not primarily focus on forecasting, and calculate averages at the leaf nodes, we introduce a new forecasting-specific tree algorithm that trains global Pooled Regression (PR) models in the leaves allowing the models to learn cross-series information and also uses some time-series-specific splitting and stopping procedures. The depth of the tree is controlled by conducting a statistical linearity test commonly employed in TAR models, as well as measuring the error reduction percentage at each node split. Thus, the proposed tree model requires minimal external hyperparameter tuning and provides competitive results under its default configuration. We also use this tree algorithm to develop a forest where the forecasts provided by a collection of diverse SETAR-Trees are combined during the forecasting process. In our evaluation on eight publicly available datasets, the proposed tree and forest models are able to achieve significantly higher accuracy than a set of state-of-the-art tree-based algorithms and forecasting benchmarks across four evaluation metrics.

Tuberculosis (TB), an infectious bacterial disease, is a significant cause of death, especially in low-income countries, with an estimated ten million new cases reported globally in $2020$. While TB is treatable, non-adherence to the medication regimen is a significant cause of morbidity and mortality. Thus, proactively identifying patients at risk of dropping off their medication regimen enables corrective measures to mitigate adverse outcomes. Using a proxy measure of extreme non-adherence and a dataset of nearly $700,000$ patients from four states in India, we formulate and solve the machine learning (ML) problem of early prediction of non-adherence based on a custom rank-based metric. We train ML models and evaluate against baselines, achieving a $\sim 100\%$ lift over rule-based baselines and $\sim 214\%$ over a random classifier, taking into account country-wide large-scale future deployment. We deal with various issues in the process, including data quality, high-cardinality categorical data, low target prevalence, distribution shift, variation across cohorts, algorithmic fairness, and the need for robustness and explainability. Our findings indicate that risk stratification of non-adherent patients is a viable, deployable-at-scale ML solution. As the official AI partner of India's Central TB Division, we are working on multiple city and state-level pilots with the goal of pan-India deployment.

While $\ell_2$ regularization is widely used in training gradient boosted trees, popular individualized feature attribution methods for trees such as Saabas and TreeSHAP overlook the training procedure. We propose Prediction Decomposition Attribution (PreDecomp), a novel individualized feature attribution for gradient boosted trees when they are trained with $\ell_2$ regularization. Theoretical analysis shows that the inner product between PreDecomp and labels on in-sample data is essentially the total gain of a tree, and that it can faithfully recover additive models in the population case when features are independent. Inspired by the connection between PreDecomp and total gain, we also propose TreeInner, a family of debiased global feature attributions defined in terms of the inner product between any individualized feature attribution and labels on out-sample data for each tree. Numerical experiments on a simulated dataset and a genomic ChIP dataset show that TreeInner has state-of-the-art feature selection performance. Code reproducing experiments is available at https://github.com/nalzok/TreeInner .

Increasingly, malwares are becoming complex and they are spreading on networks targeting different infrastructures and personal-end devices to collect, modify, and destroy victim information. Malware behaviors are polymorphic, metamorphic, persistent, able to hide to bypass detectors and adapt to new environments, and even leverage machine learning techniques to better damage targets. Thus, it makes them difficult to analyze and detect with traditional endpoint detection and response, intrusion detection and prevention systems. To defend against malwares, recent work has proposed different techniques based on signatures and machine learning. In this paper, we propose to use an algebraic topological approach called topological-based data analysis (TDA) to efficiently analyze and detect complex malware patterns. Next, we compare the different TDA techniques (i.e., persistence homology, tomato, TDA Mapper) and existing techniques (i.e., PCA, UMAP, t-SNE) using different classifiers including random forest, decision tree, xgboost, and lightgbm. We also propose some recommendations to deploy the best-identified models for malware detection at scale. Results show that TDA Mapper (combined with PCA) is better for clustering and for identifying hidden relationships between malware clusters compared to PCA. Persistent diagrams are better to identify overlapping malware clusters with low execution time compared to UMAP and t-SNE. For malware detection, malware analysts can use Random Forest and Decision Tree with t-SNE and Persistent Diagram to achieve better performance and robustness on noised data.

PV power forecasting models are predominantly based on machine learning algorithms which do not provide any insight into or explanation about their predictions (black boxes). Therefore, their direct implementation in environments where transparency is required, and the trust associated with their predictions may be questioned. To this end, we propose a two stage probabilistic forecasting framework able to generate highly accurate, reliable, and sharp forecasts yet offering full transparency on both the point forecasts and the prediction intervals (PIs). In the first stage, we exploit natural gradient boosting (NGBoost) for yielding probabilistic forecasts, while in the second stage, we calculate the Shapley additive explanation (SHAP) values in order to fully comprehend why a prediction was made. To highlight the performance and the applicability of the proposed framework, real data from two PV parks located in Southern Germany are employed. Comparative results with two state-of-the-art algorithms, namely Gaussian process and lower upper bound estimation, manifest a significant increase in the point forecast accuracy and in the overall probabilistic performance. Most importantly, a detailed analysis of the model's complex nonlinear relationships and interaction effects between the various features is presented. This allows interpreting the model, identifying some learned physical properties, explaining individual predictions, reducing the computational requirements for the training without jeopardizing the model accuracy, detecting possible bugs, and gaining trust in the model. Finally, we conclude that the model was able to develop complex nonlinear relationships which follow known physical properties as well as human logic and intuition.

This article was published as a part of the Data Science Blogathon. Gradient boosting is one of the best-performing and widely-used boosting algorithms in machine learning. Many concepts are associated with gradient boosting algorithms, from which many questions can be asked. This article will cover the most useful and important interview questions related to gradient boosting in data science with the core intuition and the mathematical formulations behind them. Let us start solving and understanding the questions on gradient boosting one by one.

We discuss an application of Generalized Random Forests (GRF) proposed by Athey et al.(2019) to quantile regression for time series data. We extracted the theoretical results of the GRF consistency for i.i.d. data to time series data. In particular, in the main theorem, based only on the general assumptions for time series data in Davis and Nielsen (2020), and trees in Athey et al.(2019), we show that the tsQRF (time series Quantile Regression Forests) estimator is consistent. Davis and Nielsen (2020) also discussed the estimation problem using Random Forests (RF) for time series data, but the construction procedure of the RF treated by the GRF is essentially different, and different ideas are used throughout the theoretical proof. In addition, a simulation and real data analysis were conducted.In the simulation, the accuracy of the conditional quantile estimation was evaluated under time series models. In the real data using the Nikkei Stock Average, our estimator is demonstrated to be more sensitive than the others in terms of volatility, thus preventing underestimation of risk.

Under climate change, the increasing frequency, intensity, and spatial extent of drought events lead to higher socio-economic costs. However, the relationships between the hydro-meteorological indicators and drought impacts are not identified well yet because of the complexity and data scarcity. In this paper, we proposed a framework based on the extreme gradient model (XGBoost) for Texas to predict multi-category drought impacts and connected a typical drought indicator, Standardized Precipitation Index (SPI), to the text-based impacts from the Drought Impact Reporter (DIR). The preliminary results of this study showed an outstanding performance of the well-trained models to assess drought impacts on agriculture, fire, society & public health, plants & wildlife, as well as relief, response & restrictions in Texas. It also provided a possibility to appraise drought impacts using hydro-meteorological indicators with the proposed framework in the United States, which could help drought risk management by giving additional information and improving the updating frequency of drought impacts. Our interpretation results using the Shapley additive explanation (SHAP) interpretability technique revealed that the rules guiding the predictions of XGBoost comply with domain expertise knowledge around the role that SPI indicators play around drought impacts.

TREs are widely, and increasingly used to support statistical analysis of sensitive data across a range of sectors (e.g., health, police, tax and education) as they enable secure and transparent research whilst protecting data confidentiality. There is an increasing desire from academia and industry to train AI models in TREs. The field of AI is developing quickly with applications including spotting human errors, streamlining processes, task automation and decision support. These complex AI models require more information to describe and reproduce, increasing the possibility that sensitive personal data can be inferred from such descriptions. TREs do not have mature processes and controls against these risks. This is a complex topic, and it is unreasonable to expect all TREs to be aware of all risks or that TRE researchers have addressed these risks in AI-specific training. GRAIMATTER has developed a draft set of usable recommendations for TREs to guard against the additional risks when disclosing trained AI models from TREs. The development of these recommendations has been funded by the GRAIMATTER UKRI DARE UK sprint research project. This version of our recommendations was published at the end of the project in September 2022. During the course of the project, we have identified many areas for future investigations to expand and test these recommendations in practice. Therefore, we expect that this document will evolve over time.