Boosted decision trees typically yield good accuracy, precision, and ROC area. However, because the outputs from boosting are not well calibrated posterior probabilities, boosting yields poor squared error and cross-entropy. We empirically demonstrate why AdaBoost predicts distorted probabilities and examine three calibration methods for correcting this distortion: Platt Scaling, Isotonic Regression, and Logistic Correction. We also experiment with boosting using log-loss instead of the usual exponential loss. Experiments show that Logistic Correction and boosting with log-loss work well when boosting weak models such as decision stumps, but yield poor performance when boosting more complex models such as full decision trees. Platt Scaling and Isotonic Regression, however, significantly improve the probabilities predicted by

Ensembles of classification and regression trees remain popular machine learning methods because they define flexible non-parametric models that predict well and are computationally efficient both during training and testing. During induction of decision trees one aims to find predicates that are maximally informative about the prediction target. To select good predicates most approaches estimate an information-theoretic scoring function, the information gain, both for classification and regression problems. We point out that the common estimation procedures are biased and show that by replacing them with improved estimators of the discrete and the differential entropy we can obtain better decision trees. In effect our modifications yield improved predictive performance and are simple to implement in any decision tree code.

Mapping and tracking biological ocean features, such as harmful algal blooms, is an important problem in the environmental sciences. The problem exhibits a high degree of uncertainty, because of both the dynamic ocean context and the challenges of sensing. Plan-based policy learning has been shown to be a powerful technique for obtaining robust intelligent behaviour in the face of uncertainty. In this paper we apply this technique in simulation, to the problem of tracking the outer edge of 2D biological features, such as the surfaces of harmful algal blooms. We show that plan-based policy-learning leads to highly accurate tracking in simulation, even in situations where the uncertainty governing the shape of the patch cannot be directly modelled. We present simulation results that give confidence that the approach could work in practice. We are now collaborating with ocean scientists at MBARI to perform physical tests at sea.

Agricultural research has been profited by technical advances such as automation, data mining. Today, data mining is used in a vast areas and many off-the-shelf data mining system products and domain specific data mining application soft wares are available, but data mining in agricultural soil datasets is a relatively a young research field. The large amounts of data that are nowadays virtually harvested along with the crops have to be analyzed and should be used to their full extent. This research aims at analysis of soil dataset using data mining techniques. It focuses on classification of soil using various algorithms available. Another important purpose is to predict untested attributes using regression technique, and implementation of automated soil sample classification.

The Artificial Prediction Market is a recent machine learning technique for multi-class classification, inspired from the financial markets. It involves a number of trained market participants that bet on the possible outcomes and are rewarded if they predict correctly. This paper generalizes the scope of the Artificial Prediction Markets to regression, where there are uncountably many possible outcomes and the error is usually the MSE. For that, we introduce the reward kernel that rewards each participant based on its prediction error and we derive the price equations. Using two reward kernels we obtain two different learning rules, one of which is approximated using Hermite-Gauss quadrature. The market setting makes it easy to aggregate specialized regressors that only predict when an observation falls into their specialization domain. Experiments show that regression markets based on the two learning rules outperform Random Forest Regression on many UCI datasets and are rarely outperformed.

Random forests are a scheme proposed by Leo Breiman in the 2000's for building a predictor ensemble with a set of decision trees that grow in randomly selected subspaces of data. Despite growing interest and practical use, there has been little exploration of the statistical properties of random forests, and little is known about the mathematical forces driving the algorithm. In this paper, we offer an in-depth analysis of a random forests model suggested by Breiman in \cite{Bre04}, which is very close to the original algorithm. We show in particular that the procedure is consistent and adapts to sparsity, in the sense that its rate of convergence depends only on the number of strong features and not on how many noise variables are present.

We propose a tree regularization framework, which enables many tree models to perform feature selection efficiently. The key idea of the regularization framework is to penalize selecting a new feature for splitting when its gain (e.g. information gain) is similar to the features used in previous splits. The regularization framework is applied on random forest and boosted trees here, and can be easily applied to other tree models. Experimental studies show that the regularized trees can select high-quality feature subsets with regard to both strong and weak classifiers. Because tree models can naturally deal with categorical and numerical variables, missing values, different scales between variables, interactions and nonlinearities etc., the tree regularization framework provides an effective and efficient feature selection solution for many practical problems.

Risk bounds for Classification and Regression Trees (CART, Breiman et. al. 1984) classifiers are obtained under a margin condition in the binary supervised classification framework. These risk bounds are obtained conditionally on the construction of the maximal deep binary tree and permit to prove that the linear penalty used in the CART pruning algorithm is valid under a margin condition. It is also shown that, conditionally on the construction of the maximal tree, the final selection by test sample does not alter dramatically the estimation accuracy of the Bayes classifier. In the two-class classification framework, the risk bounds that are proved, obtained by using penalized model selection, validate the CART algorithm which is used in many data mining applications such as Biology, Medicine or Image Coding.

We describe Information Forests, an approach to classification that generalizes Random Forests by replacing the splitting criterion of non-leaf nodes from a discriminative one -- based on the entropy of the label distribution -- to a generative one -- based on maximizing the information divergence between the class-conditional distributions in the resulting partitions. The basic idea consists of deferring classification until a measure of "classification confidence" is sufficiently high, and instead breaking down the data so as to maximize this measure. In an alternative interpretation, Information Forests attempt to partition the data into subsets that are "as informative as possible" for the purpose of the task, which is to classify the data. Classification confidence, or informative content of the subsets, is quantified by the Information Divergence. Our approach relates to active learning, semi-supervised learning, mixed generative/discriminative learning.

Metric learning makes it plausible to learn distances for complex distributions of data from labeled data. However, to date, most metric learning methods are based on a single Mahalanobis metric, which cannot handle heterogeneous data well. Those that learn multiple metrics throughout the space have demonstrated superior accuracy, but at the cost of computational efficiency. Here, we take a new angle to the metric learning problem and learn a single metric that is able to implicitly adapt its distance function throughout the feature space. This metric adaptation is accomplished by using a random forest-based classifier to underpin the distance function and incorporate both absolute pairwise position and standard relative position into the representation. We have implemented and tested our method against state of the art global and multi-metric methods on a variety of data sets. Overall, the proposed method outperforms both types of methods in terms of accuracy (consistently ranked first) and is an order of magnitude faster than state of the art multi-metric methods (16x faster in the worst case).