Spatial cognition empowers animals with remarkably efficient navigation abilities, largely depending on the scene-level understanding of spatial environments. Recently, it has been found that a neural population in the postrhinal cortex of rat brains is more strongly tuned to the spatial layout rather than objects in a scene. Inspired by the representations of spatial layout in local scenes to encode different regions separately, we proposed LOP-Field that realizes the Layout-Object-Position(LOP) association to model the hierarchical representations for robotic scene understanding. Powered by foundation models and implicit scene representation, a neural field is implemented as a scene memory for robots, storing a queryable representation of scenes with position-wise, object-wise, and layout-wise information. To validate the built LOP association, the model is tested to infer region information from 3D positions with quantitative metrics, achieving an average accuracy of more than 88\%. It is also shown that the proposed method using region information can achieve improved object and view localization results with text and RGB input compared to state-of-the-art localization methods.

Bayesian optimization (BO) is an integral part of automated scientific discovery -- the so-called self-driving lab -- where human inputs are ideally minimal or at least non-blocking. However, scientists often have strong intuition, and thus human feedback is still useful. Nevertheless, prior works in enhancing BO with expert feedback, such as by incorporating it in an offline or online but blocking (arrives at each BO iteration) manner, are incompatible with the spirit of self-driving labs. In this work, we study whether a small amount of randomly arriving expert feedback that is being incorporated in a non-blocking manner can improve a BO campaign. To this end, we run an additional, independent computing thread on top of the BO loop to handle the feedback-gathering process. The gathered feedback is used to learn a Bayesian preference model that can readily be incorporated into the BO thread, to steer its exploration-exploitation process. Experiments on toy and chemistry datasets suggest that even just a few intermittent, asynchronous expert feedback can be useful for improving or constraining BO. This can especially be useful for its implication in improving self-driving labs, e.g. making them more data-efficient and less costly.

The aim in many sciences is to understand the mechanisms that underlie the observed distribution of variables, starting from a set of initial hypotheses. Causal discovery allows us to infer mechanisms as sets of cause and effect relationships in a generalized way -- without necessarily tailoring to a specific domain. Causal discovery algorithms search over a structured hypothesis space, defined by the set of directed acyclic graphs, to find the graph that best explains the data. For high-dimensional problems, however, this search becomes intractable and scalable algorithms for causal discovery are needed to bridge the gap. In this paper, we define a novel causal graph partition that allows for divide-and-conquer causal discovery with theoretical guarantees. We leverage the idea of a superstructure -- a set of learned or existing candidate hypotheses -- to partition the search space. We prove under certain assumptions that learning with a causal graph partition always yields the Markov Equivalence Class of the true causal graph. We show our algorithm achieves comparable accuracy and a faster time to solution for biologically-tuned synthetic networks and networks up to ${10^4}$ variables. This makes our method applicable to gene regulatory network inference and other domains with high-dimensional structured hypothesis spaces.

Leveraging external knowledge is crucial for achieving high performance in knowledge-intensive tasks, such as question answering. The retrieve-and-read approach is widely adopted for integrating external knowledge into a language model. However, this approach suffers from increased computational cost and latency due to the long context length, which grows proportionally with the number of retrieved knowledge. Furthermore, existing retrieval-augmented models typically retrieve information from a single type of knowledge source, limiting their scalability to diverse knowledge sources with varying structures. In this work, we introduce an efficient memory-augmented transformer called MATTER, designed to retrieve relevant knowledge from multiple heterogeneous knowledge sources. Specifically, our model retrieves and reads from both unstructured sources (paragraphs) and semi-structured sources (QA pairs) in the form of fixed-length neural memories. We demonstrate that our model outperforms existing efficient retrieval-augmented models on popular QA benchmarks in terms of both accuracy and speed. Furthermore, MATTER achieves competitive results compared to conventional read-and-retrieve models while having 100x throughput during inference.

Skill discovery methods enable agents to learn diverse emergent behaviors without explicit rewards. To make learned skills useful for unknown downstream tasks, obtaining a semantically diverse repertoire of skills is essential. While some approaches introduce a discriminator to distinguish skills and others aim to increase state coverage, no existing work directly addresses the "semantic diversity" of skills. We hypothesize that leveraging the semantic knowledge of large language models (LLMs) can lead us to improve semantic diversity of resulting behaviors. In this sense, we introduce Language Guided Skill Discovery (LGSD), a skill discovery framework that aims to directly maximize the semantic diversity between skills. LGSD takes user prompts as input and outputs a set of semantically distinctive skills. The prompts serve as a means to constrain the search space into a semantically desired subspace, and the generated LLM outputs guide the agent to visit semantically diverse states within the subspace. We demonstrate that LGSD enables legged robots to visit different user-intended areas on a plane by simply changing the prompt. Furthermore, we show that language guidance aids in discovering more diverse skills compared to five existing skill discovery methods in robot-arm manipulation environments. Lastly, LGSD provides a simple way of utilizing learned skills via natural language.

Grounded language models use external sources of information, such as knowledge graphs, to meet some of the general challenges associated with pre-training. By extending previous work on compositional generalization in semantic parsing, we allow for a controlled evaluation of the degree to which these models learn and generalize from patterns in knowledge graphs. We develop a procedure for generating natural language questions paired with knowledge graphs that targets different aspects of compositionality and further avoids grounding the language models in information already encoded implicitly in their weights. We evaluate existing methods for combining language models with knowledge graphs and find them to struggle with generalization to sequences of unseen lengths and to novel combinations of seen base components. While our experimental results provide some insight into the expressive power of these models, we hope our work and released datasets motivate future research on how to better combine language models with structured knowledge representations.

This paper explores the concept formation and alignment within the realm of language models (LMs). We propose a mechanism for identifying concepts and their hierarchical organization within the semantic representations learned by various LMs, encompassing a spectrum from early models like Glove to the transformer-based language models like ALBERT and T5. Our approach leverages the inherent structure present in the semantic embeddings generated by these models to extract a taxonomy of concepts and their hierarchical relationships. This investigation sheds light on how LMs develop conceptual understanding and opens doors to further research to improve their ability to reason and leverage real-world knowledge. We further conducted experiments and observed the possibility of isolating these extracted conceptual representations from the reasoning modules of the transformer-based LMs. The observed concept formation along with the isolation of conceptual representations from the reasoning modules can enable targeted token engineering to open the door for potential applications in knowledge transfer, explainable AI, and the development of more modular and conceptually grounded language models.

The discovery of new catalysts is essential for the design of new and more efficient chemical processes in order to transition to a sustainable future. We introduce an AI-guided computational screening framework unifying linguistic reasoning with quantum-chemistry based feedback from 3D atomistic representations. Our approach formulates catalyst discovery as an uncertain environment where an agent actively searches for highly effective catalysts via the iterative combination of large language model (LLM)-derived hypotheses and atomistic graph neural network (GNN)-derived feedback. Identified catalysts in intermediate search steps undergo structural evaluation based on spatial orientation, reaction pathways, and stability. Scoring functions based on adsorption energies and reaction energy barriers steer the exploration in the LLM's knowledge space toward energetically favorable, high-efficiency catalysts. We introduce planning methods that automatically guide the exploration without human input, providing competitive performance against expert-enumerated chemical descriptor-based implementations. By integrating language-guided reasoning with computational chemistry feedback, our work pioneers AI-accelerated, trustworthy catalyst discovery.

This paper introduces an automatic affordance reasoning paradigm tailored to minimal semantic inputs, addressing the critical challenges of classifying and manipulating unseen classes of objects in household settings. Inspired by human cognitive processes, our method integrates generative language models and physics-based simulators to foster analytical thinking and creative imagination of novel affordances. Structured with a tripartite framework consisting of analysis, imagination, and evaluation, our system "analyzes" the requested affordance names into interaction-based definitions, "imagines" the virtual scenarios, and "evaluates" the object affordance. If an object is recognized as possessing the requested affordance, our method also predicts the optimal pose for such functionality, and how a potential user can interact with it. Tuned on only a few synthetic examples across 3 affordance classes, our pipeline achieves a very high success rate on affordance classification and functional pose prediction of 8 classes of novel objects, outperforming learning-based baselines. Validation through real robot manipulating experiments demonstrates the practical applicability of the imagined user interaction, showcasing the system's ability to independently conceptualize unseen affordances and interact with new objects and scenarios in everyday settings.

Incorporating spectral information to enhance Graph Neural Networks (GNNs) has shown promising results but raises a fundamental challenge due to the inherent ambiguity of eigenvectors. Various architectures have been proposed to address this ambiguity, referred to as spectral invariant architectures. Notable examples include GNNs and Graph Transformers that use spectral distances, spectral projection matrices, or other invariant spectral features. However, the potential expressive power of these spectral invariant architectures remains largely unclear. The goal of this work is to gain a deep theoretical understanding of the expressive power obtainable when using spectral features. We first introduce a unified message-passing framework for designing spectral invariant GNNs, called Eigenspace Projection GNN (EPNN). A comprehensive analysis shows that EPNN essentially unifies all prior spectral invariant architectures, in that they are either strictly less expressive or equivalent to EPNN. A fine-grained expressiveness hierarchy among different architectures is also established. On the other hand, we prove that EPNN itself is bounded by a recently proposed class of Subgraph GNNs, implying that all these spectral invariant architectures are strictly less expressive than 3-WL. Finally, we discuss whether using spectral features can gain additional expressiveness when combined with more expressive GNNs.