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A Domain Decomposition Method for Fast Manifold Learning
We propose a fast manifold learning algorithm based on the methodology of domain decomposition. Starting with the set of sample points partitioned into two subdomains, we develop the solution of the interface problem that can glue the embeddings on the two subdomains into an embedding on the whole domain. We provide a detailed analysis to assess the errors produced by the gluing process using matrix perturbation theory. Numerical examples are given to illustrate the efficiency and effectiveness of the proposed methods.
Separation of Music Signals by Harmonic Structure Modeling
Zhang, Yun-gang, Zhang, Chang-shui
Separation of music signals is an interesting but difficult problem. It is helpful for many other music researches such as audio content analysis. In this paper, a new music signal separation method is proposed, which is based on harmonic structure modeling. The main idea of harmonic structure modeling is that the harmonic structure of a music signal is stable, so a music signal can be represented by a harmonic structure model. Accordingly, a corresponding separation algorithm is proposed. The main idea is to learn a harmonic structure model for each music signal in the mixture, and then separate signals by using these models to distinguish harmonic structures of different signals. Experimental results show that the algorithm can separate signals and obtain not only a very high Signalto-Noise Ratio (SNR) but also a rather good subjective audio quality.
Modeling Neuronal Interactivity using Dynamic Bayesian Networks
Zhang, Lei, Samaras, Dimitris, Alia-klein, Nelly, Volkow, Nora, Goldstein, Rita
Functional Magnetic Resonance Imaging (fMRI) has enabled scientists to look into the active brain. However, interactivity between functional brain regions, is still little studied. In this paper, we contribute a novel framework for modeling the interactions between multiple active brain regions, using Dynamic Bayesian Networks (DBNs) as generative models for brain activation patterns. This framework is applied to modeling of neuronal circuits associated with reward. The novelty of our framework from a Machine Learning perspective lies in the use of DBNs to reveal the brain connectivity and interactivity. Such interactivity models which are derived from fMRI data are then validated through a group classification task.
The Role of Top-down and Bottom-up Processes in Guiding Eye Movements during Visual Search
Zelinsky, Gregory, Zhang, Wei, Yu, Bing, Chen, Xin, Samaras, Dimitris
To investigate how top-down (TD) and bottom-up (BU) information is weighted in the guidance of human search behavior, we manipulated the proportions of BU and TD components in a saliency-based model. The model is biologically plausible and implements an artificial retina and a neuronal population code. The BU component is based on featurecontrast. The TD component is defined by a feature-template match to a stored target representation. We compared the model's behavior at different mixtures of TD and BU components to the eye movement behavior of human observers performing the identical search task. We found that a purely TD model provides a much closer match to human behavior than any mixture model using BU information. Only when biological constraints are removed (e.g., eliminating the retina) did a BU/TD mixture model begin to approximate human behavior.
Extracting Dynamical Structure Embedded in Neural Activity
Yu, Byron M., Afshar, Afsheen, Santhanam, Gopal, Ryu, Stephen I., Shenoy, Krishna V., Sahani, Maneesh
Spiking activity from neurophysiological experiments often exhibits dynamics beyond that driven by external stimulation, presumably reflecting the extensive recurrence of neural circuitry. Characterizing these dynamics may reveal important features of neural computation, particularly during internally-driven cognitive operations. For example, the activity of premotor cortex (PMd) neurons during an instructed delay period separating movement-target specification and a movementinitiation cue is believed to be involved in motor planning. We show that the dynamics underlying this activity can be captured by a lowdimensional nonlinear dynamical systems model, with underlying recurrent structure and stochastic point-process output.
Modeling Neural Population Spiking Activity with Gibbs Distributions
Wood, Frank, Roth, Stefan, Black, Michael J.
Probabilistic modeling of correlated neural population firing activity is central to understanding the neural code and building practical decoding algorithms. No parametric models currently exist for modeling multivariate correlated neural data and the high dimensional nature of the data makes fully nonparametric methods impractical. To address these problems we propose an energy-based model in which the joint probability of neural activity is represented using learned functions of the 1D marginal histograms of the data. The parameters of the model are learned using contrastive divergence and an optimization procedure for finding appropriate marginal directions. We evaluate the method using real data recorded from a population of motor cortical neurons. In particular, we model the joint probability of population spiking times and 2D hand position and show that the likelihood of test data under our model is significantly higher than under other models. These results suggest that our model captures correlations in the firing activity. Our rich probabilistic model of neural population activity is a step towards both measurement of the importance of correlations in neural coding and improved decoding of population activity.
Factorial Switching Kalman Filters for Condition Monitoring in Neonatal Intensive Care
Williams, Christopher, Quinn, John, Mcintosh, Neil
The observed physiological dynamics of an infant receiving intensive care are affected by many possible factors, including interventions to the baby, the operation of the monitoring equipment and the state of health. The Factorial Switching Kalman Filter can be used to infer the presence of such factors from a sequence of observations, and to estimate the true values where these observations have been corrupted. We apply this model to clinical time series data and show it to be effective in identifying a number of artifactual and physiological patterns.
Analyzing Auditory Neurons by Learning Distance Functions
Weiner, Inna, Hertz, Tomer, Nelken, Israel, Weinshall, Daphna
We present a novel approach to the characterization of complex sensory neurons. One of the main goals of characterizing sensory neurons is to characterize dimensions in stimulus space to which the neurons are highly sensitive (causing large gradients in the neural responses) or alternatively dimensions in stimulus space to which the neuronal response are invariant (defining iso-response manifolds). We formulate this problem as that of learning a geometry on stimulus space that is compatible with the neural responses: the distance between stimuli should be large when the responses they evoke are very different, and small when the responses they evoke are similar. Here we show how to successfully train such distance functions using rather limited amount of information. The data consisted of the responses of neurons in primary auditory cortex (A1) of anesthetized cats to 32 stimuli derived from natural sounds. For each neuron, a subset of all pairs of stimuli was selected such that the responses of the two stimuli in a pair were either very similar or very dissimilar. The distance function was trained to fit these constraints. The resulting distance functions generalized to predict the distances between the responses of a test stimulus and the trained stimuli.