Materials
Programmable Control of Ultrasound Swarmbots through Reinforcement Learning
Schrage, Matthijs, Medany, Mahmoud, Ahmed, Daniel
Powered by acoustics, existing therapeutic and diagnostic procedures will become less invasive and new methods will become available that have never been available before. Acoustically driven microrobot navigation based on microbubbles is a promising approach for targeted drug delivery. Previous studies have used acoustic techniques to manipulate microbubbles in vitro and in vivo for the delivery of drugs using minimally invasive procedures. Even though many advanced capabilities and sophisticated control have been achieved for acoustically powered microrobots, there remain many challenges that remain to be solved. In order to develop the next generation of intelligent micro/nanorobots, it is highly desirable to conduct accurate identification of the micro-nanorobots and to control their dynamic motion autonomously. Here we use reinforcement learning control strategies to learn the microrobot dynamics and manipulate them through acoustic forces. The result demonstrated for the first time autonomous acoustic navigation of microbubbles in a microfluidic environment. Taking advantage of the benefit of the second radiation force, microbubbles swarm to form a large swarm, which is then driven along the desired trajectory. More than 100 thousand images were used for the training to study the unexpected dynamics of microbubbles. As a result of this work, the microrobots are validated to be controlled, illustrating a good level of robustness and providing computational intelligence to the microrobots, which enables them to navigate independently in an unstructured environment without requiring outside assistance.
Leveraging Industry 4.0 -- Deep Learning, Surrogate Model and Transfer Learning with Uncertainty Quantification Incorporated into Digital Twin for Nuclear System
Rahman, M., Khan, Abid, Anowar, Sayeed, Al-Imran, Md, Verma, Richa, Kumar, Dinesh, Kobayashi, Kazuma, Alam, Syed
Industry 4.0 targets the conversion of the traditional industries into intelligent ones through technological revolution. This revolution is only possible through innovation, optimization, interconnection, and rapid decision-making capability. Numerical models are believed to be the key components of Industry 4.0, facilitating quick decision-making through simulations instead of costly experiments. However, numerical investigation of precise, high-fidelity models for optimization or decision-making is usually time-consuming and computationally expensive. In such instances, data-driven surrogate models are excellent substitutes for fast computational analysis and the probabilistic prediction of the output parameter for new input parameters. The emergence of Internet of Things (IoT) and Machine Learning (ML) has made the concept of surrogate modeling even more viable. However, these surrogate models contain intrinsic uncertainties, originate from modeling defects, or both. These uncertainties, if not quantified and minimized, can produce a skewed result. Therefore, proper implementation of uncertainty quantification techniques is crucial during optimization, cost reduction, or safety enhancement processes analysis. This chapter begins with a brief overview of the concept of surrogate modeling, transfer learning, IoT and digital twins. After that, a detailed overview of uncertainties, uncertainty quantification frameworks, and specifics of uncertainty quantification methodologies for a surrogate model linked to a digital twin is presented. Finally, the use of uncertainty quantification approaches in the nuclear industry has been addressed.
GemNet-OC: Developing Graph Neural Networks for Large and Diverse Molecular Simulation Datasets
Gasteiger, Johannes, Shuaibi, Muhammed, Sriram, Anuroop, Günnemann, Stephan, Ulissi, Zachary, Zitnick, C. Lawrence, Das, Abhishek
Recent years have seen the advent of molecular simulation datasets that are orders of magnitude larger and more diverse. These new datasets differ substantially in four aspects of complexity: 1. Chemical diversity (number of different elements), 2. system size (number of atoms per sample), 3. dataset size (number of data samples), and 4. domain shift (similarity of the training and test set). Despite these large differences, benchmarks on small and narrow datasets remain the predominant method of demonstrating progress in graph neural networks (GNNs) for molecular simulation, likely due to cheaper training compute requirements. This raises the question -- does GNN progress on small and narrow datasets translate to these more complex datasets? This work investigates this question by first developing the GemNet-OC model based on the large Open Catalyst 2020 (OC20) dataset. GemNet-OC outperforms the previous state-of-the-art on OC20 by 16% while reducing training time by a factor of 10. We then compare the impact of 18 model components and hyperparameter choices on performance in multiple datasets. We find that the resulting model would be drastically different depending on the dataset used for making model choices. To isolate the source of this discrepancy we study six subsets of the OC20 dataset that individually test each of the above-mentioned four dataset aspects. We find that results on the OC-2M subset correlate well with the full OC20 dataset while being substantially cheaper to train on. Our findings challenge the common practice of developing GNNs solely on small datasets, but highlight ways of achieving fast development cycles and generalizable results via moderately-sized, representative datasets such as OC-2M and efficient models such as GemNet-OC. Our code and pretrained model weights are open-sourced.
Predicting hot-electron free energies from ground-state data
Mahmoud, Chiheb Ben, Grasselli, Federico, Ceriotti, Michele
Laboratory of Computational Science and Modeling, IMX, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland (Dated: September 30, 2022) Machine-learning potentials are usually trained on the ground-state, Born-Oppenheimer energy surface, which depends exclusively on the atomic positions and not on the simulation temperature. This disregards the effect of thermally-excited electrons, that is important in metals, and essential to the description of warm dense matter. An accurate physical description of these effects requires that the nuclei move on a temperature-dependent electronic free energy. We propose a method to obtain machine-learning predictions of this free energy at an arbitrary electron temperature using exclusively training data from ground-state calculations, avoiding the need to train temperaturedependent potentials, and benchmark it on metallic liquid hydrogen at the conditions of the core of gas giants and brown dwarfs. This work demonstrates the advantages of hybrid schemes that use physical consideration to combine machine-learning predictions, providing a blueprint for the development of similar approaches that extend the reach of atomistic modelling by removing the barrier between physics and data-driven methodologies.
DTact: A Vision-Based Tactile Sensor that Measures High-Resolution 3D Geometry Directly from Darkness
Lin, Changyi, Lin, Ziqi, Wang, Shaoxiong, Xu, Huazhe
Vision-based tactile sensors that can measure 3D geometry of the contacting objects are crucial for robots to perform dexterous manipulation tasks. However, the existing sensors are usually complicated to fabricate and delicate to extend. In this work, we novelly take advantage of the reflection property of semitransparent elastomer to design a robust, low-cost, and easy-to-fabricate tactile sensor named DTact. DTact measures high-resolution 3D geometry accurately from the darkness shown in the captured tactile images with only a single image for calibration. In contrast to previous sensors, DTact is robust under various illumination conditions. Then, we build prototypes of DTact that have non-planar contact surfaces with minimal extra efforts and costs. Finally, we perform two intelligent robotic tasks including pose estimation and object recognition using DTact, in which DTact shows large potential in applications.
Applications of Quantum Computing - Analytics Vidhya
This article was published as a part of the Data Science Blogathon. Quantum computing is poised for prominence due to the exponential increase in computing capacity. Complex problems are challenging for traditional computers to solve but simple for quantum computers, making them the perfect tool for this task. A wealth of opportunities are opened up by such a development in nearly every facet of contemporary life. Google recently grabbed attention by announcing that it has achieved quantum supremacy, wherein its computers can carry out tasks that a traditional computer cannot.
SPT-NRTL: A physics-guided machine learning model to predict thermodynamically consistent activity coefficients
Winter, Benedikt, Winter, Clemens, Esper, Timm, Schilling, Johannes, Bardow, André
The availability of property data is one of the major bottlenecks in the development of chemical processes, often requiring time-consuming and expensive experiments or limiting the design space to a small number of known molecules. This bottleneck has been the motivation behind the continuing development of predictive property models. For the property prediction of novel molecules, group contribution methods have been groundbreaking. In recent times, machine learning has joined the more established property prediction models. However, even with recent successes, the integration of physical constraints into machine learning models remains challenging. Physical constraints are vital to many thermodynamic properties, such as the Gibbs-Duhem relation, introducing an additional layer of complexity into the prediction. Here, we introduce SPT-NRTL, a machine learning model to predict thermodynamically consistent activity coefficients and provide NRTL parameters for easy use in process simulations. The results show that SPT-NRTL achieves higher accuracy than UNIFAC in the prediction of activity coefficients across all functional groups and is able to predict many vapor-liquid-equilibria with near experimental accuracy, as illustrated for the exemplary mixtures water/ethanol and chloroform/n-hexane. To ease the application of SPT-NRTL, NRTL-parameters of 100 000 000 mixtures are calculated with SPT-NRTL and provided online.
Contrast Pattern Mining: A Survey
Chen, Yao, Gan, Wensheng, Wu, Yongdong, Yu, Philip S.
Contrast pattern mining (CPM) is an important and popular subfield of data mining. Traditional sequential patterns cannot describe the contrast information between different classes of data, while contrast patterns involving the concept of contrast can describe the significant differences between datasets under different contrast conditions. Based on the number of papers published in this field, we find that researchers' interest in CPM is still active. Since CPM has many research questions and research methods. It is difficult for new researchers in the field to understand the general situation of the field in a short period of time. Therefore, the purpose of this article is to provide an up-to-date comprehensive and structured overview of the research direction of contrast pattern mining. First, we present an in-depth understanding of CPM, including basic concepts, types, mining strategies, and metrics for assessing discriminative ability. Then we classify CPM methods according to their characteristics into boundary-based algorithms, tree-based algorithms, evolutionary fuzzy system-based algorithms, decision tree-based algorithms, and other algorithms. In addition, we list the classical algorithms of these methods and discuss their advantages and disadvantages. Advanced topics in CPM are presented. Finally, we conclude our survey with a discussion of the challenges and opportunities in this field.
Semi-supervised machine learning model for analysis of nanowire morphologies from transmission electron microscopy images
Lu, Shizhao, Montz, Brian, Emrick, Todd, Jayaraman, Arthi
In the field of materials science, microscopy is the first and often only accessible method for structural characterization. There is a growing interest in the development of machine learning methods that can automate the analysis and interpretation of microscopy images. Typically training of machine learning models requires large numbers of images with associated structural labels, however, manual labeling of images requires domain knowledge and is prone to human error and subjectivity. To overcome these limitations, we present a semi-supervised transfer learning approach that uses a small number of labeled microscopy images for training and performs as effectively as methods trained on significantly larger image datasets. Specifically, we train an image encoder with unlabeled images using self-supervised learning methods and use that encoder for transfer learning of different downstream image tasks (classification and segmentation) with a minimal number of labeled images for training. We test the transfer learning ability of two self-supervised learning methods: SimCLR and Barlow-Twins on transmission electron microscopy (TEM) images. We demonstrate in detail how this machine learning workflow applied to TEM images of protein nanowires enables automated classification of nanowire morphologies (e.g., single nanowires, nanowire bundles, phase separated) as well as segmentation tasks that can serve as groundwork for quantification of nanowire domain sizes and shape analysis. We also extend the application of the machine learning workflow to classification of nanoparticle morphologies and identification of different type of viruses from TEM images.
A micromechanics-based recurrent neural networks model for path-dependent cyclic deformation of short fiber composites
Friemann, J., Dashtbozorg, B., Fagerström, M., Mirkhalaf, S. M.
The macroscopic response of short fiber reinforced composites is dependent on an extensive range of microstructural parameters. Thus, micromechanical modeling of these materials is challenging and in some cases, computationally expensive. This is particularly important when path-dependent plastic behavior is needed to be predicted. A solution to this challenge is to enhance micromechanical solutions with machine learning techniques such as artificial neural networks. In this work, a recurrent deep neural network model is trained to predict the path-dependent elasto-plastic stress response of short fiber reinforced composites, given the microstructural parameters and the strain path. Micromechanical meanfield simulations are conducted to create a data base for training the validating the model. The model gives very accurate predictions in a computationally efficient manner when compared with independent micromechanical simulations.