Education
MIT CSAIL's AI predicts a protein's function from chains of amino acids
AI's been tapped to classify seizures and predict whether breast cancer is likely to metastasize, but that's far from its only medical application. In an academic paper scheduled to be presented at the International Conference on Learning Representations in May, MIT CSAIL scientists describe a system that "computationally" breaks down how segments of chained amino acids determine a protein's function. They believe it could be used to improve protein engineering -- that is, the design of new enzymes or proteins with certain functions. "I want to marginalize structure," Tristan Bepler, a graduate student in the computation and biology group at CSAIL and a coauthor of the paper, said in a statement. "We want to know what proteins do, and knowing structure is important for that. But can we predict the function of a protein given only its amino acid sequence? The motivation is to move away from specifically predicting structures, and move toward [finding] how amino acid sequences relate to function."
How to make the most out of machine learning by investing in people and technology SnapLogic
Previously published on LSE Business Review. Machine learning is poised to pave the way for many exciting opportunities for businesses, but there are many hurdles to be crossed before getting to the finishing line. Many organisations are still struggling with legacy systems and are slow to invest in more advanced technologies. But the more pressing issue at hand, one that has been an ongoing problem for the technology sector, is the short supply of qualified talent to match what is a fast-moving and demanding industry. By design, machine learning is experimental and often unpredictable โ a lot of exploration is required before organisations can even begin to make sense of the data and which machine learning algorithms will work best. While the unpredictable nature of machine learning is understandably daunting, many organisations have yet to fully grasp what is required to effectively deploy and manage it.
9 Best R Programming Certifications, Courses & Training JA directives
Are you looking for the Best R Programming Certification? Here is the handpicked list of Best R Programming Course & Training to assist you to become an expert in programming in R. Before you start doing these courses we have included an article How to Start Programming in R? Go through this article you will get a brief idea about where and how to start learning r? Find out how attractive the r programming jobs are? Description: Data Analytics with R training will help you gain expertise in R Programming, Data Manipulation, Exploratory Data Analysis, Data Visualization, Data Mining, Regression, Sentiment Analysis and using R Studio for real-life case studies on Retail, Social Media. "R" wins on Statistical Capability, Graphical capability, Cost, a rich set of packages and is the most preferred tool for Data Scientists. In this course, you will learn how to program in R and how to use R for effective data analysis.
7 Technical Concept Every Data Science Beginner Should Know Codementor
Some involve coding, some are drag-and-drop, some are difficult for beginners, some have no coding at all. All of these tools will help you with data visualization. But one of the most overlooked but critical practical functions of a data scientist has been included under this heading: summarisation. Summarisation means the practical result of your data science workflow. What does the result of your analysis mean for the operation of the business or the research problem that you are currently working on? How do you convert your result to the maximum improvement for your business? Can you measure the impact this result will have on the profit of your enterprise?
Supervised Discrete Hashing with Relaxation
Gui, Jie, Liu, Tongliang, Sun, Zhenan, Tao, Dacheng, Tan, Tieniu
Data-dependent hashing has recently attracted attention due to being able to support efficient retrieval and storage of high-dimensional data such as documents, images, and videos. In this paper, we propose a novel learning-based hashing method called "Supervised Discrete Hashing with Relaxation" (SDHR) based on "Supervised Discrete Hashing" (SDH). SDH uses ordinary least squares regression and traditional zero-one matrix encoding of class label information as the regression target (code words), thus fixing the regression target. In SDHR, the regression target is instead optimized. The optimized regression target matrix satisfies a large margin constraint for correct classification of each example. Compared with SDH, which uses the traditional zero-one matrix, SDHR utilizes the learned regression target matrix and, therefore, more accurately measures the classification error of the regression model and is more flexible. As expected, SDHR generally outperforms SDH. Experimental results on two large-scale image datasets (CIFAR-10 and MNIST) and a large-scale and challenging face dataset (FRGC) demonstrate the effectiveness and efficiency of SDHR.
Learning Problem-agnostic Speech Representations from Multiple Self-supervised Tasks
Pascual, Santiago, Ravanelli, Mirco, Serrร , Joan, Bonafonte, Antonio, Bengio, Yoshua
Learning good representations without supervision is still an open issue in machine learning, and is particularly challenging for speech signals, which are often characterized by long sequences with a complex hierarchical structure. Some recent works, however, have shown that it is possible to derive useful speech representations by employing a self-supervised encoder-discriminator approach. This paper proposes an improved self-supervised method, where a single neural encoder is followed by multiple workers that jointly solve different self-supervised tasks. The needed consensus across different tasks naturally imposes meaningful constraints to the encoder, contributing to discover general representations and to minimize the risk of learning superficial ones. Experiments show that the proposed approach can learn transferable, robust, and problem-agnostic features that carry on relevant information from the speech signal, such as speaker identity, phonemes, and even higher-level features such as emotional cues. In addition, a number of design choices make the encoder easily exportable, facilitating its direct usage or adaptation to different problems.
Adapting Stochastic Block Models to Power-Law Degree Distributions
Qiao, Maoying, Yu, Jun, Bian, Wei, Li, Qiang, Tao, Dacheng
Stochastic block models (SBMs) have been playing an important role in modeling clusters or community structures of network data. But, it is incapable of handling several complex features ubiquitously exhibited in real-world networks, one of which is the power-law degree characteristic. To this end, we propose a new variant of SBM, termed power-law degree SBM (PLD-SBM), by introducing degree decay variables to explicitly encode the varying degree distribution over all nodes. With an exponential prior, it is proved that PLD-SBM approximately preserves the scale-free feature in real networks. In addition, from the inference of variational E-Step, PLD-SBM is indeed to correct the bias inherited in SBM with the introduced degree decay factors. Furthermore, experiments conducted on both synthetic networks and two real-world datasets including Adolescent Health Data and the political blogs network verify the effectiveness of the proposed model in terms of cluster prediction accuracies.
Multi-Preference Actor Critic
Durugkar, Ishan, Hausknecht, Matthew, Swaminathan, Adith, MacAlpine, Patrick
Policy gradient algorithms typically combine discounted future rewards with an estimated value function, to compute the direction and magnitude of parameter updates. However, for most Reinforcement Learning tasks, humans can provide additional insight to constrain the policy learning. We introduce a general method to incorporate multiple different feedback channels into a single policy gradient loss. In our formulation, the Multi-Preference Actor Critic (M-PAC), these different types of feedback are implemented as constraints on the policy. We use a Lagrangian relaxation to satisfy these constraints using gradient descent while learning a policy that maximizes rewards. Experiments in Atari and Pendulum verify that constraints are being respected and can accelerate the learning process.
Diversified Hidden Markov Models for Sequential Labeling
Qiao, Maoying, Bian, Wei, Xu, Richard Yida, Tao, Dacheng
Labeling of sequential data is a prevalent meta-problem for a wide range of real world applications. While the first-order Hidden Markov Models (HMM) provides a fundamental approach for unsupervised sequential labeling, the basic model does not show satisfying performance when it is directly applied to real world problems, such as part-of-speech tagging (PoS tagging) and optical character recognition (OCR). Aiming at improving performance, important extensions of HMM have been proposed in the literatures. One of the common key features in these extensions is the incorporation of proper prior information. In this paper, we propose a new extension of HMM, termed diversified Hidden Markov Models (dHMM), which utilizes a diversity-encouraging prior over the state-transition probabilities and thus facilitates more dynamic sequential labellings. Specifically, the diversity is modeled by a continuous determinantal point process prior, which we apply to both unsupervised and supervised scenarios. Learning and inference algorithms for dHMM are derived. Empirical evaluations on benchmark datasets for unsupervised PoS tagging and supervised OCR confirmed the effectiveness of dHMM, with competitive performance to the state-of-the-art.