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Algorithmic Contiguity from Low-Degree Heuristic II: Predicting Detection-Recovery Gaps

arXiv.org Machine Learning

The low-degree polynomial framework has emerged as a powerful tool for providing evidence of statistical-computational gaps in high-dimensional inference. For detection problems, the standard approach bounds the low-degree advantage through an explicit orthonormal basis. However, this method does not extend naturally to estimation tasks, and thus fails to capture the \emph{detection-recovery gap phenomenon} that arises in many high-dimensional problems. Although several important advances have been made to overcome this limitation \cite{SW22, SW25, CGGV25+}, the existing approaches often rely on delicate, model-specific combinatorial arguments. In this work, we develop a general approach for obtaining \emph{conditional computational lower bounds} for recovery problems from mild bounds on low-degree testing advantage. Our method combines the notion of algorithmic contiguity in \cite{Li25} with a cross-validation reduction in \cite{DHSS25} that converts successful recovery into a hypothesis test with lopsided success probabilities. In contrast to prior unconditional lower bounds, our argument is conceptually simple, flexible, and largely model-independent. We apply this framework to several canonical inference problems, including planted submatrix, planted dense subgraph, stochastic block model, multi-frequency angular synchronization, orthogonal group synchronization, and multi-layer stochastic block model. In the first three settings, our method recovers existing low-degree lower bounds for recovery in \cite{SW22, SW25} via a substantially simpler argument. In the latter three, it gives new evidence for conjectured computational thresholds including the persistence of detection-recovery gaps. Together, these results suggest that mild control of low-degree advantage is often sufficient to explain computational barriers for recovery in high-dimensional statistical models.


Prior-Fitted Functional Flow: In-Context Generative Models for Pharmacokinetics

arXiv.org Machine Learning

We introduce Prior-Fitted Functional Flows, a generative foundation model for pharmacokinetics that enables zero-shot population synthesis and individual forecasting without manual parameter tuning. We learn functional vector fields, explicitly conditioned on the sparse, irregular data of an entire study population. This enables the generation of coherent virtual cohorts as well as forecasting of partially observed patient trajectories with calibrated uncertainty. We construct a new open-access literature corpus to inform our priors, and demonstrate state-of-the-art predictive accuracy on extensive real-world datasets.


DARLING: Detection Augmented Reinforcement Learning with Non-Stationary Guarantees

arXiv.org Machine Learning

We study model-free reinforcement learning (RL) in non-stationary finite-horizon episodic Markov decision processes (MDPs) without prior knowledge of the non-stationarity. We focus on the piecewise-stationary (PS) setting, where both the reward and transition dynamics can change an arbitrary number of times. We propose Detection Augmented Reinforcement Learning (DARLING), a modular wrapper for PS-RL that applies to both tabular and linear MDPs, without knowledge of the changes. Under certain change-point separation and reachability conditions, DARLING improves the best available dynamic regret bounds in both settings and yields strong empirical performance. We further establish the first minimax lower bounds for PS-RL in tabular and linear MDPs, showing that DARLING is the first nearly optimal algorithm. Experiments on standard benchmarks demonstrate that DARLING consistently surpasses the state-of-the-art methods across diverse non-stationary scenarios.


Fairness Constraints in High-Dimensional Generalized Linear Models

arXiv.org Machine Learning

Machine learning models often inherit biases from historical data, raising critical concerns about fairness and accountability. Conventional fairness interventions typically require access to sensitive attributes like gender or race, but privacy and legal restrictions frequently limit their use. To address this challenge, we propose a framework that infers sensitive attributes from auxiliary features and integrates fairness constraints into model training. Our approach mitigates bias while preserving predictive accuracy, offering a practical solution for fairness-aware learning. Empirical evaluations validate its effectiveness, contributing to the advancement of more equitable algorithmic decision-making.


StrEBM: A Structured Latent Energy-Based Model for Blind Source Separation

arXiv.org Machine Learning

This paper proposes StrEBM, a structured latent energy-based model for source-wise structured representation learning. The framework is motivated by a broader goal of promoting identifiable and decoupled latent organization by assigning different latent dimensions their own learnable structural biases, rather than constraining the entire latent representation with a single shared energy. In this sense, blind source separation is adopted here as a concrete and verifiable testbed, through which the evolution of latent dimensions toward distinct underlying components can be directly examined. In the proposed framework, latent trajectories are optimized directly together with an observation-generation map and source-wise structural parameters. Each latent dimension is associated with its own energy-based formulation, allowing different latent components to gradually evolve toward distinct source-like roles during training. In the present study, this source-wise energy design is instantiated using Gaussian-process-inspired energies with learnable length-scales, but the framework itself is not restricted to Gaussian processes and is intended as a more general structured latent EBM formulation. Experiments on synthetic multichannel signals under linear and nonlinear mixing settings show that the proposed model can recover source components effectively, providing an initial empirical validation of the framework. At the same time, the study reveals important optimization characteristics, including slow late-stage convergence and reduced stability under nonlinear observation mappings. These findings not only clarify the practical behavior of the current GP-based instantiation, but also establish a basis for future investigation of richer source-wise energy families and more robust nonlinear optimization strategies.


A proposal for PU classification under Non-SCAR using clustering and logistic model

arXiv.org Machine Learning

The present study aims to investigate a cluster cleaning algorithm that is both computationally simple and capable of solving the PU classification when the SCAR condition is unsatisfied. A secondary objective of this study is to determine the robustness of the LassoJoint method to perturbations of the SCAR condition. In the first step of our algorithm, we obtain cleaning labels from 2-means clustering. Subsequently, we perform logistic regression on the cleaned data, assigning positive labels from the cleaning algorithm with additional true positive observations. The remaining observations are assigned the negative label. The proposed algorithm is evaluated by comparing 11 real data sets from machine learning repositories and a synthetic set. The findings obtained from this study demonstrate the efficacy of the clustering algorithm in scenarios where the SCAR condition is violated and further underscore the moderate robustness of the LassoJoint algorithm in this context.


Extraction of informative statistical features in the problem of forecasting time series generated by It{รด}-type processes

arXiv.org Machine Learning

In this paper, we consider the problem of extraction of most informative features from time series that are regarded as observed values of stochastic processes satisfying the It{รด} stochastic differential equations with unknown random drift and diffusion coefficients. We do not attract any additional information and use only the information contained in the time series as it is. Therefore, as additional features, we use the parameters of statistically adjusted mixture-type models of the observed regularities of the behavior of the time series. Several algorithms of construction of these parameters are discussed. These algorithms are based on statistical reconstruction of the coefficients which, in turn, is based on statistical separation of normal mixtures. We obtain two types of parameters by the techniques of the uniform and non-uniform statistical reconstruction of the coefficients of the underlying It{รด} process. The reconstructed coefficients obtained by uniform techniques do not depend on the current value of the process, while the non-uniform techniques reconstruct the coefficients with the account of their dependence on the value of the process. Actually, the non-uniform techniques used in this paper represent a stochastic analog of the Taylor expansion for the time series. The efficiency of the obtained additional features is compared by using them in the autoregressive algorithms of prediction of time series. In order to obtain pure conclusion that is not affected by unwanted factors, say, related to a special choice of the architecture of the neural network prediction methods, we used only simple autoregressive algorithms. We show that the use of additional statistical features improves the prediction.


Non-Stationarity in the Embedding Space of Time Series Foundation Models

arXiv.org Machine Learning

Time series foundation models (TSFMs) are widely used as generic feature extractors, yet the notion of non-stationarity in their embedding spaces remains poorly understood. Recent work often conflates non-stationarity with distribution shift, blurring distinctions fundamental to classical time-series analysis and long-standing methodologies such as statistical process control (SPC). In SPC, non-stationarity signals a process leaving a stable regime - via shifts in mean, variance, or emerging trends - and detecting such departures is central to quality monitoring and change-point analysis. Motivated by this diagnostic tradition, we study how different forms of distributional non-stationarity - mean shifts, variance changes, and linear trends - become linearly accessible in TSFM embedding spaces under controlled conditions. We further examine temporal non-stationarity arising from persistence, which reflects violations of weak stationarity due to long-memory or near-unit-root behavior rather than explicit distributional shifts. By sweeping shift strength and probing multiple TSFMs, we find that embedding-space detectability of non-stationarity degrades smoothly and that different models exhibit distinct, model-specific failure modes.


Adaptive Kernel Selection for Kernelized Diffusion Maps

arXiv.org Machine Learning

Selecting an appropriate kernel is a central challenge in kernel-based spectral methods. In \emph{Kernelized Diffusion Maps} (KDM), the kernel determines the accuracy of the RKHS estimator of a diffusion-type operator and hence the quality and stability of the recovered eigenfunctions. We introduce two complementary approaches to adaptive kernel selection for KDM. First, we develop a variational outer loop that learns continuous kernel parameters, including bandwidths and mixture weights, by differentiating through the Cholesky-reduced KDM eigenproblem with an objective combining eigenvalue maximization, subspace orthonormality, and RKHS regularization. Second, we propose an unsupervised cross-validation pipeline that selects kernel families and bandwidths using an eigenvalue-sum criterion together with random Fourier features for scalability. Both methods share a common theoretical foundation: we prove Lipschitz dependence of KDM operators on kernel weights, continuity of spectral projectors under a gap condition, a residual-control theorem certifying proximity to the target eigenspace, and exponential consistency of the cross-validation selector over a finite kernel dictionary.


Neighbor Embedding for High-Dimensional Sparse Poisson Data

arXiv.org Machine Learning

Across many scientific fields, measurements often represent the number of times an event occurs. For example, a document can be represented by word occurrence counts, neural activity by spike counts per time window, or online communication by daily email counts. These measurements yield high-dimensional count data that often approximate a Poisson distribution, frequently with low rates that produce substantial sparsity and complicate downstream analysis. A useful approach is to embed the data into a low-dimensional space that preserves meaningful structure, commonly termed dimensionality reduction. Yet existing dimensionality reduction methods, including both linear (e.g., PCA) and nonlinear approaches (e.g., t-SNE), often assume continuous Euclidean geometry, thereby misaligning with the discrete, sparse nature of low-rate count data. Here, we propose p-SNE (Poisson Stochastic Neighbor Embedding), a nonlinear neighbor embedding method designed around the Poisson structure of count data, using KL divergence between Poisson distributions to measure pairwise dissimilarity and Hellinger distance to optimize the embedding. We test p-SNE on synthetic Poisson data and demonstrate its ability to recover meaningful structure in real-world count datasets, including weekday patterns in email communication, research area clusters in OpenReview papers, and temporal drift and stimulus gradients in neural spike recordings.