Overview
Unveiling Pitfalls: Understanding Why AI-driven Code Agents Fail at GitHub Issue Resolution
Chen, Zhi, Ma, Wei, Jiang, Lingxiao
AI-driven software development has rapidly advanced with the emergence of software development agents that leverage large language models (LLMs) to tackle complex, repository-level software engineering tasks. These agents go beyond just generation of final code; they engage in multi-step reasoning, utilize various tools for code modification and debugging, and interact with execution environments to diagnose and iteratively resolve issues. However, most existing evaluations focus primarily on static analyses of final code outputs, yielding limited insights into the agents' dynamic problem-solving processes. To fill this gap, we conduct an in-depth empirical study on 3,977 solving-phase trajectories and 3,931 testing-phase logs from 8 top-ranked agents evaluated on 500 GitHub issues in the SWE-Bench benchmark. Our exploratory analysis shows that Python execution errors during the issue resolution phase correlate with lower resolution rates and increased reasoning overheads. We have identified the most prevalent errors -- such as ModuleNotFoundError and TypeError -- and highlighted particularly challenging errors like OSError and database-related issues (e.g., IntegrityError) that demand significantly more debugging effort. Furthermore, we have discovered 3 bugs in the SWE-Bench platform that affect benchmark fairness and accuracy; these issues have been reported to and confirmed by the maintainers. To promote transparency and foster future research, we publicly share our datasets and analysis scripts.
ChatGPT or A Silent Everywhere Helper: A Survey of Large Language Models
Akhtarshenas, Azim, Dini, Afshin, Ayoobi, Navid
Large Language Models (LLMs) have revo lutionized natural language processing Natural Language Processing (NLP), with Chat Generative Pre-trained Transformer (ChatGPT) standing out as a notable exampledue to its advanced capabilities and widespread applications. This survey provides a comprehensive analysis of ChatGPT, exploring its architecture, training processes, and functionalities. We examine its integration into various domains across industries such as customer service, education, healthcare, and entertainment. A comparative analysis with other LLMs highlights ChatGPT's unique features and performance metrics. Regarding benchmarks, the paper examines ChatGPT's comparative performance against other LLMs and discusses potential risks such as misinformation, bias, and data privacy concerns. Additionally, we offer a number of figures and tables that outline the backdrop of the discussion, the main ideas of the article, the numerous LLM models, a thorough list of datasets used for pre-training, fine-tuning, and evaluation, as well as particular LLM applications with pertinent references. Finally, we identify future research directions and technological advancements, underscoring the evolving landscape of LLMs and their profound impact on artificial intelligence Artificial Intelligence (AI) and society.
LLM-Aided Customizable Profiling of Code Data Based On Programming Language Concepts
Thorat, Pankaj, Qidwai, Adnan, Dhar, Adrija, Chakraborty, Aishwariya, Eswaran, Anand, Patel, Hima, Jayachandran, Praveen
Data profiling is critical in machine learning for generating descriptive statistics, supporting both deeper understanding and downstream tasks like data valuation and curation. This work addresses profiling specifically in the context of code datasets for Large Language Models (code-LLMs), where data quality directly influences tasks such as code generation and summarization. Characterizing code datasets in terms of programming language concepts enables better insights and targeted data curation. Our proposed methodology decomposes code data profiling into two phases: (1) an offline phase where LLMs are leveraged to derive and learn rules for extracting syntactic and semantic concepts across various programming languages, including previously unseen or low-resource languages, and (2) an online deterministic phase applying these derived rules for efficient real-time analysis. This hybrid approach is customizable, extensible to new syntactic and semantic constructs, and scalable to multiple languages. Experimentally, our LLM-aided method achieves a mean accuracy of 90.33% for syntactic extraction rules and semantic classification accuracies averaging 80% and 77% across languages and semantic concepts, respectively.
A Comprehensive Survey on Architectural Advances in Deep CNNs: Challenges, Applications, and Emerging Research Directions
Khan, Saddam Hussain, Iqbal, Rashid
Deep Convolutional Neural Networks (CNNs) have significantly advanced deep learning, driving breakthroughs in computer vision, natural language processing, medical diagnosis, object detection, and speech recognition. Architectural innovations including 1D, 2D, and 3D convolutional models, dilated and grouped convolutions, depthwise separable convolutions, and attention mechanisms address domain-specific challenges and enhance feature representation and computational efficiency. Structural refinements such as spatial-channel exploitation, multi-path design, and feature-map enhancement contribute to robust hierarchical feature extraction and improved generalization, particularly through transfer learning. Efficient preprocessing strategies, including Fourier transforms, structured transforms, low-precision computation, and weight compression, optimize inference speed and facilitate deployment in resource-constrained environments. This survey presents a unified taxonomy that classifies CNN architectures based on spatial exploitation, multi-path structures, depth, width, dimensionality expansion, channel boosting, and attention mechanisms. It systematically reviews CNN applications in face recognition, pose estimation, action recognition, text classification, statistical language modeling, disease diagnosis, radiological analysis, cryptocurrency sentiment prediction, 1D data processing, video analysis, and speech recognition. In addition to consolidating architectural advancements, the review highlights emerging learning paradigms such as few-shot, zero-shot, weakly supervised, federated learning frameworks and future research directions include hybrid CNN-transformer models, vision-language integration, generative learning, etc. This review provides a comprehensive perspective on CNN's evolution from 2015 to 2025, outlining key innovations, challenges, and opportunities.
Survey on Generalization Theory for Graph Neural Networks
Vasileiou, Antonis, Jegelka, Stefanie, Levie, Ron, Morris, Christopher
Message-passing graph neural networks (MPNNs) have emerged as the leading approach for machine learning on graphs, attracting significant attention in recent years. While a large set of works explored the expressivity of MPNNs, i.e., their ability to separate graphs and approximate functions over them, comparatively less attention has been directed toward investigating their generalization abilities, i.e., making meaningful predictions beyond the training data. Here, we systematically review the existing literature on the generalization abilities of MPNNs. We analyze the strengths and limitations of various studies in these domains, providing insights into their methodologies and findings. Furthermore, we identify potential avenues for future research, aiming to deepen our understanding of the generalization abilities of MPNNs.
Interpretability of Graph Neural Networks to Assert Effects of Global Change Drivers on Ecological Networks
Anakok, Emre, Barbillon, Pierre, Fontaine, Colin, Thebault, Elisa
Pollinators play a crucial role for plant reproduction, either in natural ecosystem or in human-modified landscape. Global change drivers,including climate change or land use modifications, can alter the plant-pollinator interactions. To assert the potential influence of global change drivers on pollination, large-scale interactions, climate and land use data are required. While recent machine learning methods, such as graph neural networks (GNNs), allow the analysis of such datasets, interpreting their results can be challenging. We explore existing methods for interpreting GNNs in order to highlight the effects of various environmental covariates on pollination network connectivity. A large simulation study is performed to confirm whether these methods can detect the interactive effect between a covariate and a genus of plant on connectivity, and whether the application of debiasing techniques influences the estimation of these effects. An application on the Spipoll dataset, with and without accounting for sampling effects, highlights the potential impact of land use on network connectivity and shows that accounting for sampling effects partially alters the estimation of these effects.
Iffy-Or-Not: Extending the Web to Support the Critical Evaluation of Fallacious Texts
Lim, Gionnieve, Kim, Juho, Perrault, Simon T.
Social platforms have expanded opportunities for deliberation with the comments being used to inform one's opinion. However, using such information to form opinions is challenged by unsubstantiated or false content. To enhance the quality of opinion formation and potentially confer resistance to misinformation, we developed Iffy-Or-Not (ION), a browser extension that seeks to invoke critical thinking when reading texts. With three features guided by argumentation theory, ION highlights fallacious content, suggests diverse queries to probe them with, and offers deeper questions to consider and chat with others about. From a user study (N=18), we found that ION encourages users to be more attentive to the content, suggests queries that align with or are preferable to their own, and poses thought-provoking questions that expands their perspectives. However, some participants expressed aversion to ION due to misalignments with their information goals and thinking predispositions. Potential backfiring effects with ION are discussed.
Learning on LLM Output Signatures for gray-box LLM Behavior Analysis
Bar-Shalom, Guy, Frasca, Fabrizio, Lim, Derek, Gelberg, Yoav, Ziser, Yftah, El-Yaniv, Ran, Chechik, Gal, Maron, Haggai
Large Language Models (LLMs) have achieved widespread adoption, yet our understanding of their behavior remains limited, particularly in detecting data contamination and hallucinations. While recently proposed probing techniques provide insights through activation analysis, they require "white-box" access to model internals, often unavailable. Current "gray-box" approaches typically analyze only the probability of the actual tokens in the sequence with simple task-specific heuristics. Importantly, these methods overlook the rich information contained in the full token distribution at each processing step. To address these limitations, we propose that gray-box analysis should leverage the complete observable output of LLMs, consisting of both the previously used token probabilities as well as the complete token distribution sequences - a unified data type we term LOS (LLM Output Signature). To this end, we develop a transformer-based approach to process LOS that theoretically guarantees approximation of existing techniques while enabling more nuanced analysis. Our approach achieves superior performance on hallucination and data contamination detection in gray-box settings, significantly outperforming existing baselines. Furthermore, it demonstrates strong transfer capabilities across datasets and LLMs, suggesting that LOS captures fundamental patterns in LLM behavior.
Generative AI in Transportation Planning: A Survey
Da, Longchao, Chen, Tiejin, Li, Zhuoheng, Bachiraju, Shreyas, Yao, Huaiyuan, Li, Li, Dong, Yushun, Hu, Xiyang, Tu, Zhengzhong, Wang, Dongjie, Zhao, Yue, Xuanyu, null, Zhou, null, Pendyala, Ram, Stabler, Benjamin, Yang, Yezhou, Zhou, Xuesong, Wei, Hua
The integration of generative artificial intelligence (GenAI) into transportation planning has the potential to revolutionize tasks such as demand forecasting, infrastructure design, policy evaluation, and traffic simulation. However, there is a critical need for a systematic framework to guide the adoption of GenAI in this interdisciplinary domain. In this survey, we, a multidisciplinary team of researchers spanning computer science and transportation engineering, present the first comprehensive framework for leveraging GenAI in transportation planning. Specifically, we introduce a new taxonomy that categorizes existing applications and methodologies into two perspectives: transportation planning tasks and computational techniques. From the transportation planning perspective, we examine the role of GenAI in automating descriptive, predictive, generative, simulation, and explainable tasks to enhance mobility systems. From the computational perspective, we detail advancements in data preparation, domain-specific fine-tuning, and inference strategies, such as retrieval-augmented generation and zero-shot learning tailored to transportation applications. Additionally, we address critical challenges, including data scarcity, explainability, bias mitigation, and the development of domain-specific evaluation frameworks that align with transportation goals like sustainability, equity, and system efficiency. This survey aims to bridge the gap between traditional transportation planning methodologies and modern AI techniques, fostering collaboration and innovation. By addressing these challenges and opportunities, we seek to inspire future research that ensures ethical, equitable, and impactful use of generative AI in transportation planning.
Command R7B Arabic: A Small, Enterprise Focused, Multilingual, and Culturally Aware Arabic LLM
Alnumay, Yazeed, Barbet, Alexandre, Bialas, Anna, Darling, William, Desai, Shaan, Devassy, Joan, Duffy, Kyle, Howe, Stephanie, Lasche, Olivia, Lee, Justin, Shrinivason, Anirudh, Tracey, Jennifer
Building high-quality large language models (LLMs) for enterprise Arabic applications remains challenging due to the limited availability of digitized Arabic data. In this work, we present a data synthesis and refinement strategy to help address this problem, namely, by leveraging synthetic data generation and human-in-the-loop annotation to expand our Arabic training corpus. We further present our iterative post training recipe that is essential to achieving state-of-the-art performance in aligning the model with human preferences, a critical aspect to enterprise use cases. The culmination of this effort is the release of a small, 7B, open-weight model that outperforms similarly sized peers in head-to-head comparisons and on Arabic-focused benchmarks covering cultural knowledge, instruction following, RAG, and contextual faithfulness.