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Generative Artificial Intelligence and Agents in Research and Teaching

arXiv.org Artificial Intelligence

This study provides a comprehensive analysis of the development, functioning, and application of generative artificial intelligence (GenAI) and large language models (LLMs), with an emphasis on their implications for research and education. It traces the conceptual evolution from artificial intelligence (AI) through machine learning (ML) and deep learning (DL) to transformer architectures, which constitute the foundation of contemporary generative systems. Technical aspects, including prompting strategies, word embeddings, and probabilistic sampling methods (temperature, top-k, and top-p), are examined alongside the emergence of autonomous agents. These elements are considered in relation to both the opportunities they create and the limitations and risks they entail. The work critically evaluates the integration of GenAI across the research process, from ideation and literature review to research design, data collection, analysis, interpretation, and dissemination. While particular attention is given to geographical research, the discussion extends to wider academic contexts. A parallel strand addresses the pedagogical applications of GenAI, encompassing course and lesson design, teaching delivery, assessment, and feedback, with geography education serving as a case example. Central to the analysis are the ethical, social, and environmental challenges posed by GenAI. Issues of bias, intellectual property, governance, and accountability are assessed, alongside the ecological footprint of LLMs and emerging technological strategies for mitigation. The concluding section considers near- and long-term futures of GenAI, including scenarios of sustained adoption, regulation, and potential decline. By situating GenAI within both scholarly practice and educational contexts, the study contributes to critical debates on its transformative potential and societal responsibilities.


A Survey on the Safety and Security Threats of Computer-Using Agents: JARVIS or Ultron?

arXiv.org Artificial Intelligence

Recently, AI-driven interactions with computing devices have advanced from basic prototype tools to sophisticated, LLM-based systems that emulate human-like operations in graphical user interfaces. We are now witnessing the emergence of \emph{Computer-Using Agents} (CUAs), capable of autonomously performing tasks such as navigating desktop applications, web pages, and mobile apps. However, as these agents grow in capability, they also introduce novel safety and security risks. Vulnerabilities in LLM-driven reasoning, with the added complexity of integrating multiple software components and multimodal inputs, further complicate the security landscape. In this paper, we present a systematization of knowledge on the safety and security threats of CUAs. We conduct a comprehensive literature review and distill our findings along four research objectives: \textit{\textbf{(i)}} define the CUA that suits safety analysis; \textit{\textbf{(ii)} } categorize current safety threats among CUAs; \textit{\textbf{(iii)}} propose a comprehensive taxonomy of existing defensive strategies; \textit{\textbf{(iv)}} summarize prevailing benchmarks, datasets, and evaluation metrics used to assess the safety and performance of CUAs. Building on these insights, our work provides future researchers with a structured foundation for exploring unexplored vulnerabilities and offers practitioners actionable guidance in designing and deploying secure Computer-Using Agents.


Introduction to Regularization and Learning Methods for Inverse Problems

arXiv.org Artificial Intelligence

These lecture notes evolve around mathematical concepts arising in inverse problems. We start by introducing inverse problems through examples such as differentiation, deconvolution, computed tomography and phase retrieval. This then leads us to the framework of well-posedness and first considerations regarding reconstruction and inversion approaches. The second chapter then first deals with classical regularization theory of inverse problems in Hilbert spaces. After introducing the pseudo-inverse, we review the concept of convergent regularization. Within this chapter we then proceed to ask the question of how to realize practical reconstruction algorithms. Here, we mainly focus on Tikhonov and sparsity promoting regularization in finite dimensional spaces. In the third chapter, we dive into modern deep-learning methods, which allow solving inverse problems in a data-dependent approach. The intersection between inverse problems and machine learning is a rapidly growing field and our exposition here restricts itself to a very limited selection of topics. Among them are learned regularization, fully-learned Bayesian estimation, post-processing strategies and plug-n-play methods.


Teaching LLMs to Think Mathematically: A Critical Study of Decision-Making via Optimization

arXiv.org Artificial Intelligence

This paper investigates the capabilities of large language models (LLMs) in formulating and solving decision-making problems using mathematical programming. We first conduct a systematic review and meta-analysis of recent literature to assess how well LLMs understand, structure, and solve optimization problems across domains. The analysis is guided by critical review questions focusing on learning approaches, dataset designs, evaluation metrics, and prompting strategies. Our systematic evidence is complemented by targeted experiments designed to evaluate the performance of state-of-the-art LLMs in automatically generating optimization models for problems in computer networks. Using a newly constructed dataset, we apply three prompting strategies: Act-as-expert, chain-of-thought, and self-consistency, and evaluate the obtained outputs based on optimality gap, token-level F1 score, and compilation accuracy. Results show promising progress in LLMs' ability to parse natural language and represent symbolic formulations, but also reveal key limitations in accuracy, scalability, and interpretability. These empirical gaps motivate several future research directions, including structured datasets, domain-specific fine-tuning, hybrid neuro-symbolic approaches, modular multi-agent architectures, and dynamic retrieval via chain-of-RAGs. This paper contributes a structured roadmap for advancing LLM capabilities in mathematical programming.


Previously on... Automating Code Review

arXiv.org Artificial Intelligence

Modern Code Review (MCR) is a standard practice in software engineering, yet it demands substantial time and resource investments. Recent research has increasingly explored automating core review tasks using machine learning (ML) and deep learning (DL). As a result, there is substantial variability in task definitions, datasets, and evaluation procedures. This study provides the first comprehensive analysis of MCR automation research, aiming to characterize the field's evolution, formalize learning tasks, highlight methodological challenges, and offer actionable recommendations to guide future research. Focusing on the primary code review tasks, we systematically surveyed 691 publications and identified 24 relevant studies published between May 2015 and April 2024. Each study was analyzed in terms of tasks, models, metrics, baselines, results, validity concerns, and artifact availability. In particular, our analysis reveals significant potential for standardization, including 48 task metric combinations, 22 of which were unique to their original paper, and limited dataset reuse. We highlight challenges and derive concrete recommendations for examples such as the temporal bias threat, which are rarely addressed so far. Our work contributes to a clearer overview of the field, supports the framing of new research, helps to avoid pitfalls, and promotes greater standardization in evaluation practices.


A Retail-Corpus for Aspect-Based Sentiment Analysis with Large Language Models

arXiv.org Artificial Intelligence

Aspect-based sentiment analysis enhances sentiment detection by associating it with specific aspects, offering deeper insights than traditional sentiment analysis. This study introduces a manually annotated dataset of 10,814 multilingual customer reviews covering brick-and-mortar retail stores, labeled with eight aspect categories and their sentiment. Using this dataset, the performance of GPT-4 and LLaMA-3 in aspect based sentiment analysis is evaluated to establish a baseline for the newly introduced data. The results show both models achieving over 85% accuracy, while GPT-4 outperforms LLaMA-3 overall with regard to all relevant metrics.


LLM-based Agentic Reasoning Frameworks: A Survey from Methods to Scenarios

arXiv.org Artificial Intelligence

Recent advances in the intrinsic reasoning capabilities of large language models (LLMs) have given rise to LLM-based agent systems that exhibit near-human performance on a variety of automated tasks. However, although these systems share similarities in terms of their use of LLMs, different reasoning frameworks of the agent system steer and organize the reasoning process in different ways. In this survey, we propose a systematic taxonomy that decomposes agentic reasoning frameworks and analyze how these frameworks dominate framework-level reasoning by comparing their applications across different scenarios. Specifically, we propose an unified formal language to further classify agentic reasoning systems into single-agent methods, tool-based methods, and multi-agent methods. After that, we provide a comprehensive review of their key application scenarios in scientific discovery, healthcare, software engineering, social simulation, and economics. We also analyze the characteristic features of each framework and summarize different evaluation strategies. Our survey aims to provide the research community with a panoramic view to facilitate understanding of the strengths, suitable scenarios, and evaluation practices of different agentic reasoning frameworks.


Theory of Mind in Large Language Models: Assessment and Enhancement

arXiv.org Artificial Intelligence

Theory of Mind (ToM)-the ability to reason about the mental states of oneself and others-is a cornerstone of human social intelligence. As Large Language Models (LLMs) become increasingly integrated into daily life, understanding their ability to interpret and respond to human mental states is crucial for enabling effective interactions. In this paper, we review LLMs' ToM capabilities by analyzing both evaluation benchmarks and enhancement strategies. For evaluation, we focus on recently proposed and widely used story-based benchmarks. For enhancement, we provide an in-depth analysis of recent methods aimed at improving LLMs' ToM abilities. Furthermore, we outline promising directions for future research to further advance these capabilities and better adapt LLMs to more realistic and diverse scenarios. Our survey serves as a valuable resource for researchers interested in evaluating and advancing LLMs' ToM capabilities.


SurveyGen: Quality-Aware Scientific Survey Generation with Large Language Models

arXiv.org Artificial Intelligence

Automatic survey generation has emerged as a key task in scientific document processing. While large language models (LLMs) have shown promise in generating survey texts, the lack of standardized evaluation datasets critically hampers rigorous assessment of their performance against human-written surveys. In this work, we present SurveyGen, a large-scale dataset comprising over 4,200 human-written surveys across diverse scientific domains, along with 242,143 cited references and extensive quality-related metadata for both the surveys and the cited papers. Leveraging this resource, we build QUAL-SG, a novel quality-aware framework for survey generation that enhances the standard Retrieval-Augmented Generation (RAG) pipeline by incorporating quality-aware indicators into literature retrieval to assess and select higher-quality source papers. Using this dataset and framework, we systematically evaluate state-of-the-art LLMs under varying levels of human involvement - from fully automatic generation to human-guided writing. Experimental results and human evaluations show that while semi-automatic pipelines can achieve partially competitive outcomes, fully automatic survey generation still suffers from low citation quality and limited critical analysis.


OmniMRI: A Unified Vision--Language Foundation Model for Generalist MRI Interpretation

arXiv.org Artificial Intelligence

Magnetic Resonance Imaging (MRI) is indispensable in clinical practice but remains constrained by fragmented, multi-stage workflows encompassing acquisition, reconstruction, segmentation, detection, diagnosis, and reporting. While deep learning has achieved progress in individual tasks, existing approaches are often anatomy- or application-specific and lack generalizability across diverse clinical settings. Moreover, current pipelines rarely integrate imaging data with complementary language information that radiologists rely on in routine practice. Here, we introduce OmniMRI, a unified vision-language foundation model designed to generalize across the entire MRI workflow. OmniMRI is trained on a large-scale, heterogeneous corpus curated from 60 public datasets, over 220,000 MRI volumes and 19 million MRI slices, incorporating image-only data, paired vision-text data, and instruction-response data. Its multi-stage training paradigm, comprising self-supervised vision pretraining, vision-language alignment, multimodal pretraining, and multi-task instruction tuning, progressively equips the model with transferable visual representations, cross-modal reasoning, and robust instruction-following capabilities. Qualitative results demonstrate OmniMRI's ability to perform diverse tasks within a single architecture, including MRI reconstruction, anatomical and pathological segmentation, abnormality detection, diagnostic suggestion, and radiology report generation. These findings highlight OmniMRI's potential to consolidate fragmented pipelines into a scalable, generalist framework, paving the way toward foundation models that unify imaging and clinical language for comprehensive, end-to-end MRI interpretation.