We investigate methods for selecting sets of labeled vertices for use in predicting the labels of vertices on a graph. We specifically study methods which choose a single batch of labeled vertices (i.e. offline, non sequential methods). In this setting, we find common graph smoothness assumptions directly motivate simple label selection methods with interesting theoretical guarantees. These methods bound prediction error in terms of the smoothness of the true labels with respect to the graph. Some of these bounds give new motivations for previously proposed algorithms, and some suggest new algorithms which we evaluate. We show improved performance over baseline methods on several real world data sets.

Motivated from real world problems, like object categorization, we study a particular mixed-norm regularization for Multiple Kernel Learning (MKL). It is assumed that the given set of kernels are grouped into distinct components where each component is crucial for the learning task at hand. The formulation hence employs $l_\infty$ regularization for promoting combinations at the component level and $l_1$ regularization for promoting sparsity among kernels in each component. While previous attempts have formulated this as a non-convex problem, the formulation given here is an instance of non-smooth convex optimization problem which admits an efficient Mirror-Descent (MD) based procedure. The MD procedure optimizes over product of simplexes, which is not a well-studied case in literature. Results on real-world datasets show that the new MKL formulation is well-suited for object categorization tasks and that the MD based algorithm outperforms state-of-the-art MKL solvers like \texttt{simpleMKL} in terms of computational effort.

We are often interested in casting classification and clustering problems in a regression framework, because it is feasible to achieve some statistical properties in this framework by imposing some penalty criteria. In this paper we illustrate optimal scoring, which was originally proposed for performing Fisher linear discriminant analysis by regression, in the application of unsupervised learning. In particular, we devise a novel clustering algorithm that we call optimal discriminant clustering (ODC). We associate our algorithm with the existing unsupervised learning algorithms such as spectral clustering, discriminative clustering and sparse principal component analysis. Thus, our work shows that optimal scoring provides a new approach to the implementation of unsupervised learning. This approach facilitates the development of new unsupervised learning algorithms.

Causal structure-discovery techniques usually assume that all causes of more than one variable are observed. This is the so-called causal sufficiency assumption. In practice, it is untestable, and often violated. In this paper, we present an efficient causal structure-learning algorithm, suited for causally insufficient data. Similar to algorithms such as IC* and FCI, the proposed approach drops the causal sufficiency assumption and learns a structure that indicates (potential) latent causes for pairs of observed variables. Assuming a constant local density of the data-generating graph, our algorithm makes a quadratic number of conditional-independence tests w.r.t. the number of variables. We show with experiments that our algorithm is comparable to the state-of-the-art FCI algorithm in accuracy, while being several orders of magnitude faster on large problems. We conclude that MBCS* makes a new range of causally insufficient problems computationally tractable.

Semantic hashing seeks compact binary codes of datapoints so that the Hamming distance between codewords correlates with semantic similarity. Hinton et al. used a clever implementation of autoencoders to find such codes. In this paper, we show that the problem of finding a best code for a given dataset is closely related to the problem of graph partitioning and can be shown to be NP hard. By relaxing the original problem, we obtain a spectral method whose solutions are simply a subset of thresh- olded eigenvectors of the graph Laplacian. By utilizing recent results on convergence of graph Laplacian eigenvectors to the Laplace-Beltrami eigen- functions of manifolds, we show how to efficiently calculate the code of a novel datapoint. Taken together, both learning the code and applying it to a novel point are extremely simple. Our experiments show that our codes significantly outperform the state-of-the art.

We use graphical models and structure learning to explore how people learn policies in sequential decision making tasks. Studies of sequential decision-making in humans frequently find suboptimal performance relative to an ideal actor that knows the graph model that generates reward in the environment. We argue that the learning problem humans face also involves learning the graph structure for reward generation in the environment. We formulate the structure learning problem using mixtures of reward models, and solve the optimal action selection problem using Bayesian Reinforcement Learning. We show that structure learning in one and two armed bandit problems produces many of the qualitative behaviors deemed suboptimal in previous studies. Our argument is supported by the results of experiments that demonstrate humans rapidly learn and exploit new reward structure.

We consider the problem of bounding from above the log-partition function corresponding to second-order Ising models for binary distributions. We introduce a new bound, the cardinality bound, which can be computed via convex optimization. The corresponding error on the logpartition functionis bounded above by twice the distance, in model parameter space, to a class of "standard" Ising models, for which variable interdependence is described via a simple mean field term. In the context of maximum-likelihood, using the new bound instead of the exact log-partition function, while constraining the distance to the class of standard Ising models, leads not only to a good approximation to the log-partition function, but also to a model that is parsimonious, and easily interpretable.We compare our bound with the log-determinant bound introduced by Wainwright and Jordan (2006), and show that when the l

We develop a probabilistic model of human memory performance in free recall experiments. In these experiments, a subject first studies a list of words and then tries to recall them. To model these data, we draw on both previous psychological research and statistical topic models of text documents. We assume that memories are formed by assimilating the semantic meaning of studied words (represented as a distribution over topics) into a slowly changing latent context (represented in the same space). During recall, this context is reinstated and used as a cue for retrieving studied words. By conceptualizing memory retrieval as a dynamic latent variable model, we are able to use Bayesian inference to represent uncertainty and reason about the cognitive processes underlying memory. We present a particle filter algorithm for performing approximate posterior inference, and evaluate our model on the prediction of recalled words in experimental data. By specifying the model hierarchically, we are also able to capture inter-subject variability.

``How is information decoded in the brain?'' is one of the most difficult and important questions in neuroscience. Whether neural correlation is important or not in decoding neural activities is of special interest. We have developed a general framework for investigating how far the decoding process in the brain can be simplified. First, we hierarchically construct simplified probabilistic models of neural responses that ignore more than $K$th-order correlations by using a maximum entropy principle. Then, we compute how much information is lost when information is decoded using the simplified models, i.e., ``mismatched decoders''. We introduce an information theoretically correct quantity for evaluating the information obtained by mismatched decoders. We applied our proposed framework to spike data for vertebrate retina. We used 100-ms natural movies as stimuli and computed the information contained in neural activities about these movies. We found that the information loss is negligibly small in population activities of ganglion cells even if all orders of correlation are ignored in decoding. We also found that if we assume stationarity for long durations in the information analysis of dynamically changing stimuli like natural movies, pseudo correlations seem to carry a large portion of the information.

The synchronous brain activity measured via MEG (or EEG) can be interpreted as arising from a collection (possibly large) of current dipoles or sources located throughout the cortex. Estimating the number, location, and orientation of these sources remains a challenging task, one that is significantly compounded by the effects of source correlations and the presence of interference from spontaneous brain activity, sensor noise, and other artifacts. This paper derives an empirical Bayesian method for addressing each of these issues in a principled fashion. The resulting algorithm guarantees descent of a cost function uniquely designed to handle unknown orientations and arbitrary correlations. Robust interference suppression is also easily incorporated. In a restricted setting, the proposed method is shown to have theoretically zero bias estimating both the location and orientation of multi-component dipoles even in the presence of correlations, unlike a variety of existing Bayesian localization methods or common signal processing techniques such as beamforming and sLORETA. Empirical results on both simulated and real data sets verify the efficacy of this approach.