South America
TOE: A Grid-Tagging Discontinuous NER Model Enhanced by Embedding Tag/Word Relations and More Fine-Grained Tags
Liu, Jiang, Ji, Donghong, Li, Jingye, Xie, Dongdong, Teng, Chong, Zhao, Liang, Li, Fei
So far, discontinuous named entity recognition (NER) has received increasing research attention and many related methods have surged such as hypergraph-based methods, span-based methods, and sequence-to-sequence (Seq2Seq) methods, etc. However, these methods more or less suffer from some problems such as decoding ambiguity and efficiency, which limit their performance. Recently, grid-tagging methods, which benefit from the flexible design of tagging systems and model architectures, have shown superiority to adapt for various information extraction tasks. In this paper, we follow the line of such methods and propose a competitive grid-tagging model for discontinuous NER. We call our model TOE because we incorporate two kinds of Tag-Oriented Enhancement mechanisms into a state-of-the-art (SOTA) grid-tagging model that casts the NER problem into word-word relationship prediction. First, we design a Tag Representation Embedding Module (TREM) to force our model to consider not only word-word relationships but also word-tag and tag-tag relationships. Concretely, we construct tag representations and embed them into TREM, so that TREM can treat tag and word representations as queries/keys/values and utilize self-attention to model their relationships. On the other hand, motivated by the Next-Neighboring-Word (NNW) and Tail-Head-Word (THW) tags in the SOTA model, we add two new symmetric tags, namely Previous-Neighboring-Word (PNW) and Head-Tail-Word (HTW), to model more fine-grained word-word relationships and alleviate error propagation from tag prediction. In the experiments of three benchmark datasets, namely CADEC, ShARe13 and ShARe14, our TOE model pushes the SOTA results by about 0.83%, 0.05% and 0.66% in F1, demonstrating its effectiveness.
When Bioprocess Engineering Meets Machine Learning: A Survey from the Perspective of Automated Bioprocess Development
Duong-Trung, Nghia, Born, Stefan, Kim, Jong Woo, Schermeyer, Marie-Therese, Paulick, Katharina, Borisyak, Maxim, Cruz-Bournazou, Mariano Nicolas, Werner, Thorben, Scholz, Randolf, Schmidt-Thieme, Lars, Neubauer, Peter, Martinez, Ernesto
Machine learning (ML) is becoming increasingly crucial in many fields of engineering but has not yet played out its full potential in bioprocess engineering. While experimentation has been accelerated by increasing levels of lab automation, experimental planning and data modeling are still largerly depend on human intervention. ML can be seen as a set of tools that contribute to the automation of the whole experimental cycle, including model building and practical planning, thus allowing human experts to focus on the more demanding and overarching cognitive tasks. First, probabilistic programming is used for the autonomous building of predictive models. Second, machine learning automatically assesses alternative decisions by planning experiments to test hypotheses and conducting investigations to gather informative data that focus on model selection based on the uncertainty of model predictions. This review provides a comprehensive overview of ML-based automation in bioprocess development. On the one hand, the biotech and bioengineering community should be aware of the potential and, most importantly, the limitation of existing ML solutions for their application in biotechnology and biopharma. On the other hand, it is essential to identify the missing links to enable the easy implementation of ML and Artificial Intelligence (AI) tools in valuable solutions for the bio-community.
Recognizing Nested Entities from Flat Supervision: A New NER Subtask, Feasibility and Challenges
Zhu, Enwei, Liu, Yiyang, Jin, Ming, Li, Jinpeng
Many recent named entity recognition (NER) studies criticize flat NER for its non-overlapping assumption, and switch to investigating nested NER. However, existing nested NER models heavily rely on training data annotated with nested entities, while labeling such data is costly. This study proposes a new subtask, nested-from-flat NER, which corresponds to a realistic application scenario: given data annotated with flat entities only, one may still desire the trained model capable of recognizing nested entities. To address this task, we train span-based models and deliberately ignore the spans nested inside labeled entities, since these spans are possibly unlabeled entities. With nested entities removed from the training data, our model achieves 54.8%, 54.2% and 41.1% F1 scores on the subset of spans within entities on ACE 2004, ACE 2005 and GENIA, respectively. This suggests the effectiveness of our approach and the feasibility of the task. In addition, the model's performance on flat entities is entirely unaffected. We further manually annotate the nested entities in the test set of CoNLL 2003, creating a nested-from-flat NER benchmark. Analysis results show that the main challenges stem from the data and annotation inconsistencies between the flat and nested entities.
Leveraging Graph-based Cross-modal Information Fusion for Neural Sign Language Translation
Zheng, Jiangbin, Li, Siyuan, Tan, Cheng, Wu, Chong, Chen, Yidong, Li, Stan Z.
Sign Language (SL), as the mother tongue of the deaf community, is a special visual language that most hearing people cannot understand. In recent years, neural Sign Language Translation (SLT), as a possible way for bridging communication gap between the deaf and the hearing people, has attracted widespread academic attention. We found that the current mainstream end-to-end neural SLT models, which tries to learning language knowledge in a weakly supervised manner, could not mine enough semantic information under the condition of low data resources. Therefore, we propose to introduce additional word-level semantic knowledge of sign language linguistics to assist in improving current end-to-end neural SLT models. Concretely, we propose a novel neural SLT model with multi-modal feature fusion based on the dynamic graph, in which the cross-modal information, i.e. text and video, is first assembled as a dynamic graph according to their correlation, and then the graph is processed by a multi-modal graph encoder to generate the multi-modal embeddings for further usage in the subsequent neural translation models. To the best of our knowledge, we are the first to introduce graph neural networks, for fusing multi-modal information, into neural sign language translation models. Moreover, we conducted experiments on a publicly available popular SLT dataset RWTH-PHOENIX-Weather-2014T. and the quantitative experiments show that our method can improve the model.
Counting and Computing Join-Endomorphisms in Lattices (Revisited)
Pinzรณn, Carlos, Quintero, Santiago, Ramรญrez, Sergio, Rueda, Camilo, Valencia, Frank
Structures involving a lattice and join-endomorphisms on it are ubiquitous in computer science. We study the cardinality of the set $\mathcal{E}(L)$ of all join-endomorphisms of a given finite lattice $L$. In particular, we show for $\mathbf{M}_n$, the discrete order of $n$ elements extended with top and bottom, $| \mathcal{E}(\mathbf{M}_n) | =n!\mathcal{L}_n(-1)+(n+1)^2$ where $\mathcal{L}_n(x)$ is the Laguerre polynomial of degree $n$. We also study the following problem: Given a lattice $L$ of size $n$ and a set $S\subseteq \mathcal{E}(L)$ of size $m$, find the greatest lower bound ${\large\sqcap}_{\mathcal{E}(L)} S$. The join-endomorphism ${\large\sqcap}_{\mathcal{E}(L)} S$ has meaningful interpretations in epistemic logic, distributed systems, and Aumann structures. We show that this problem can be solved with worst-case time complexity in $O(mn)$ for distributive lattices and $O(mn + n^3)$ for arbitrary lattices. In the particular case of modular lattices, we present an adaptation of the latter algorithm that reduces its average time complexity. We provide theoretical and experimental results to support this enhancement. The complexity is expressed in terms of the basic binary lattice operations performed by the algorithm.
ClassActionPrediction: A Challenging Benchmark for Legal Judgment Prediction of Class Action Cases in the US
Semo, Gil, Bernsohn, Dor, Hagag, Ben, Hayat, Gila, Niklaus, Joel
The research field of Legal Natural Language Processing (NLP) has been very active recently, with Legal Judgment Prediction (LJP) becoming one of the most extensively studied tasks. To date, most publicly released LJP datasets originate from countries with civil law. In this work, we release, for the first time, a challenging LJP dataset focused on class action cases in the US. It is the first dataset in the common law system that focuses on the harder and more realistic task involving the complaints as input instead of the often used facts summary written by the court. Additionally, we study the difficulty of the task by collecting expert human predictions, showing that even human experts can only reach 53% accuracy on this dataset. Our Longformer model clearly outperforms the human baseline (63%), despite only considering the first 2,048 tokens. Furthermore, we perform a detailed error analysis and find that the Longformer model is significantly better calibrated than the human experts. Finally, we publicly release the dataset and the code used for the experiments.
VeriDark: A Large-Scale Benchmark for Authorship Verification on the Dark Web
Manolache, Andrei, Brad, Florin, Barbalau, Antonio, Ionescu, Radu Tudor, Popescu, Marius
The Dark Web represents a hotbed for illicit activity, where users communicate on different market forums in order to exchange goods and services. Law enforcement agencies benefit from forensic tools that perform authorship analysis, in order to identify and profile users based on their textual content. However, authorship analysis has been traditionally studied using corpora featuring literary texts such as fragments from novels or fan fiction, which may not be suitable in a cybercrime context. Moreover, the few works that employ authorship analysis tools for cybercrime prevention usually employ ad-hoc experimental setups and datasets. To address these issues, we release VeriDark: a benchmark comprised of three large scale authorship verification datasets and one authorship identification dataset obtained from user activity from either Dark Web related Reddit communities or popular illicit Dark Web market forums. We evaluate competitive NLP baselines on the three datasets and perform an analysis of the predictions to better understand the limitations of such approaches. We make the datasets and baselines publicly available at https://github.com/bit-ml/VeriDark.
Manipulation of individual judgments in the quantitative pairwise comparisons method
Entities very often are referred to as alternatives, while the final result is in the form of a ranking. The first mention of pairwise comparison as a systematic ranking method comes from the 13th century and is attributed to Ramon Llull [7]. Lull proposed a procedure for selecting candidates based on comparing them in pairs. This technique might be viewed as in between the electoral system and a decisionmaking method in the modern sense. In later times, pairwise comparisons were used in the context of social choice and welfare theories [33, 25, 15], psychometric measurements [41, 16, 42] and decision-making methods [27]. In 1977, Saaty published his seminal paper introducing a new decision-making method: the Analytic Hierarchy Process (AHP) [34]. AHP is based on the quantitative pairwise comparison of alternatives. As a result, each of the considered entities is assigned a weight that determines its importance.
The Open MatSci ML Toolkit: A Flexible Framework for Machine Learning in Materials Science
Miret, Santiago, Lee, Kin Long Kelvin, Gonzales, Carmelo, Nassar, Marcel, Spellings, Matthew
We present the Open MatSci ML Toolkit: a flexible, self-contained, and scalable Python-based framework to apply deep learning models and methods on scientific data with a specific focus on materials science and the OpenCatalyst Dataset. Our toolkit provides: 1. A scalable machine learning workflow for materials science leveraging PyTorch Lightning, which enables seamless scaling across different computation capabilities (laptop, server, cluster) and hardware platforms (CPU, GPU, XPU). 2. Deep Graph Library (DGL) support for rapid graph neural network prototyping and development. By publishing and sharing this toolkit with the research community via open-source release, we hope to: 1. Lower the entry barrier for new machine learning researchers and practitioners that want to get started with the OpenCatalyst dataset, which presently comprises the largest computational materials science dataset. 2. Enable the scientific community to apply advanced machine learning tools to high-impact scientific challenges, such as modeling of materials behavior for clean energy applications. We demonstrate the capabilities of our framework by enabling three new equivariant neural network models for multiple OpenCatalyst tasks and arrive at promising results for compute scaling and model performance.
50 Ways to Bake a Cookie: Mapping the Landscape of Procedural Texts
However, as content However, a single task might have thousands of corresponding is created independently, a single task could have thousands of procedural texts. This is both due to variations (for example, different corresponding procedural texts. This makes it difficult for users to recipes for the same dish) and due to the distributed nature view the bigger picture and understand the multiple ways the task of the web, where content is created independently by people who could be accomplished. In this work we propose an unsupervised do not communicate. Thus, looking at one (or a few) procedural learning approach for summarizing multiple procedural texts texts only gives the reader a limited view of the possibilities. Consequently, into an intuitive graph representation, allowing users to easily explore when people try to determine the best choice for them commonalities and differences. We demonstrate our approach given preferences (e.g., taste) and constraints (budget, time, items on recipes, a prominent example of procedural texts. User studies they do or do not have), they often resort to extensive browsing show that our representation is intuitive and coherent and that and comparisons between different texts to get the bigger picture.