Sequence-to-sequence vision-language models are showing promise, but their applicability is limited by their inference latency due to their autoregressive way of generating predictions. We propose a parallel decoding sequence-to-sequence vision-language model, trained with a Query-CTC loss, that marginalizes over multiple inference paths in the decoder. This allows us to model the joint distribution of tokens, rather than restricting to conditional distribution as in an autoregressive model. The resulting model, NARVL, achieves performance on-par with its state-of-the-art autoregressive counterpart, but is faster at inference time, reducing from the linear complexity associated with the sequential generation of tokens to a paradigm of constant time joint inference.

Language models have long been shown to embed geographical information in their hidden representations. This line of work has recently been revisited by extending this result to Large Language Models (LLMs). In this paper, we propose to fill the gap between well-established and recent literature by observing how geographical knowledge evolves when scaling language models. We show that geographical knowledge is observable even for tiny models, and that it scales consistently as we increase the model size. Notably, we observe that larger language models cannot mitigate the geographical bias that is inherent to the training data.

Three-Dimensional (3D) chromatin interactions, such as enhancer-promoter interactions (EPIs), loops, Topologically Associating Domains (TADs), and A/B compartments play critical roles in a wide range of cellular processes by regulating gene expression. Recent development of chromatin conformation capture technologies has enabled genome-wide profiling of various 3D structures, even with single cells. However, current catalogs of 3D structures remain incomplete and unreliable due to differences in technology, tools, and low data resolution. Machine learning methods have emerged as an alternative to obtain missing 3D interactions and/or improve resolution. Such methods frequently use genome annotation data (ChIP-seq, DNAse-seq, etc.), DNA sequencing information (k-mers, Transcription Factor Binding Site (TFBS) motifs), and other genomic properties to learn the associations between genomic features and chromatin interactions. In this review, we discuss computational tools for predicting three types of 3D interactions (EPIs, chromatin interactions, TAD boundaries) and analyze their pros and cons. We also point out obstacles of computational prediction of 3D interactions and suggest future research directions.

Machine learning (ML) is vulnerable to inference (e.g., membership inference, property inference, and data reconstruction) attacks that aim to infer the private information of training data or dataset. Existing defenses are only designed for one specific type of attack and sacrifice significant utility or are soon broken by adaptive attacks. We address these limitations by proposing an information-theoretic defense framework, called Inf2Guard, against the three major types of inference attacks. Our framework, inspired by the success of representation learning, posits that learning shared representations not only saves time/costs but also benefits numerous downstream tasks. Generally, Inf2Guard involves two mutual information objectives, for privacy protection and utility preservation, respectively. Inf2Guard exhibits many merits: it facilitates the design of customized objectives against the specific inference attack; it provides a general defense framework which can treat certain existing defenses as special cases; and importantly, it aids in deriving theoretical results, e.g., inherent utility-privacy tradeoff and guaranteed privacy leakage. Extensive evaluations validate the effectiveness of Inf2Guard for learning privacy-preserving representations against inference attacks and demonstrate the superiority over the baselines.

In recent years,the entire field of Natural Language Processing (NLP) has enjoyed amazing novel results achieving almost human-like performance on a variety of tasks. Legal NLP domain has also been part of this process, as it has seen an impressive growth. However, general-purpose models are not readily applicable for legal domain. Due to the nature of the domain (e.g. specialized vocabulary, long documents) specific models and methods are often needed for Legal NLP. In this work we investigate both specialized and general models for predicting the final ruling of a legal case, task known as Legal Judgment Prediction (LJP). We particularly focus on methods to extend to sequence length of Transformer-based models to better understand the long documents present in legal corpora. Extensive experiments on 4 LJP datasets in Romanian, originating from 2 sources with significantly different sizes and document lengths, show that specialized models and handling long texts are critical for a good performance.

Job-Shop Scheduling Problem (JSSP) is a combinatorial optimization problem where tasks need to be scheduled on machines in order to minimize criteria such as makespan or delay. To address more realistic scenarios, we associate a probability distribution with the duration of each task. Our objective is to generate a robust schedule, i.e. that minimizes the average makespan. This paper introduces a new approach that leverages Deep Reinforcement Learning (DRL) techniques to search for robust solutions, emphasizing JSSPs with uncertain durations. Key contributions of this research include: (1) advancements in DRL applications to JSSPs, enhancing generalization and scalability, (2) a novel method for addressing JSSPs with uncertain durations. The Wheatley approach, which integrates Graph Neural Networks (GNNs) and DRL, is made publicly available for further research and applications.

This book aims to provide a working introduction to the emerging fusion of modern statistical inference - aka machine learning (ML) or artificial intelligence (AI) - and causal inference methods. The book is aimed at upper level undergraduates and master's-level students as well as doctoral students focusing on applied empirical research. A sufficient background for the core material is one semester of introductory econometrics and one semester of machine learning. We hope the book is also useful to empirical researchers looking to apply modern methods in their work. The book provides an overview of key ideas in both predictive inference and causal inference and shows how predictive tools are key ingredients to answering many causal questions.

Given a graph or similarity matrix, we consider the problem of recovering a notion of true distance between the nodes, and so their true positions. We show that this can be accomplished in two steps: matrix factorisation, followed by nonlinear dimension reduction. This combination is effective because the point cloud obtained in the first step lives close to a manifold in which latent distance is encoded as geodesic distance. Hence, a nonlinear dimension reduction tool, approximating geodesic distance, can recover the latent positions, up to a simple transformation. We give a detailed account of the case where spectral embedding is used, followed by Isomap, and provide encouraging experimental evidence for other combinations of techniques.

Webpage entity extraction is a fundamental natural language processing task in both research and applications. Nowadays, the majority of webpage entity extraction models are trained on structured datasets which strive to retain textual content and its structure information. However, existing datasets all overlook the rich hypertext features (e.g., font color, font size) which show their effectiveness in previous works. To this end, we first collect a \textbf{H}ypertext \textbf{E}ntity \textbf{E}xtraction \textbf{D}ataset (\textit{HEED}) from the e-commerce domains, scraping both the text and the corresponding explicit hypertext features with high-quality manual entity annotations. Furthermore, we present the \textbf{Mo}E-based \textbf{E}ntity \textbf{E}xtraction \textbf{F}ramework (\textit{MoEEF}), which efficiently integrates multiple features to enhance model performance by Mixture of Experts and outperforms strong baselines, including the state-of-the-art small-scale models and GPT-3.5-turbo. Moreover, the effectiveness of hypertext features in \textit{HEED} and several model components in \textit{MoEEF} are analyzed.

Autonomous navigation at high speeds in off-road environments necessitates robots to comprehensively understand their surroundings using onboard sensing only. The extreme conditions posed by the off-road setting can cause degraded camera image quality due to poor lighting and motion blur, as well as limited sparse geometric information available from LiDAR sensing when driving at high speeds. In this work, we present RoadRunner, a novel framework capable of predicting terrain traversability and an elevation map directly from camera and LiDAR sensor inputs. RoadRunner enables reliable autonomous navigation, by fusing sensory information, handling of uncertainty, and generation of contextually informed predictions about the geometry and traversability of the terrain while operating at low latency. In contrast to existing methods relying on classifying handcrafted semantic classes and using heuristics to predict traversability costs, our method is trained end-to-end in a self-supervised fashion. The RoadRunner network architecture builds upon popular sensor fusion network architectures from the autonomous driving domain, which embed LiDAR and camera information into a common Bird's Eye View perspective. Training is enabled by utilizing an existing traversability estimation stack to generate training data in hindsight in a scalable manner from real-world off-road driving datasets. Furthermore, RoadRunner improves the system latency by a factor of roughly 4, from 500 ms to 140 ms, while improving the accuracy for traversability costs and elevation map predictions. We demonstrate the effectiveness of RoadRunner in enabling safe and reliable off-road navigation at high speeds in multiple real-world driving scenarios through unstructured desert environments.