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State of the art applications of deep learning within tracking and detecting marine debris: A survey

arXiv.org Artificial Intelligence

Deep learning techniques have been explored within the marine litter problem for approximately 20 years but the majority of the research has developed rapidly in the last five years. We provide an in-depth, up to date, summary and analysis of 28 of the most recent and significant contributions of deep learning in marine debris. From cross referencing the research paper results, the YOLO family significantly outperforms all other methods of object detection but there are many respected contributions to this field that have categorically agreed that a comprehensive database of underwater debris is not currently available for machine learning. Using a small dataset curated and labelled by us, we tested YOLOv5 on a binary classification task and found the accuracy was low and the rate of false positives was high; highlighting the importance of a comprehensive database. We conclude this survey with over 40 future research recommendations and open challenges.


SciNews: From Scholarly Complexities to Public Narratives -- A Dataset for Scientific News Report Generation

arXiv.org Artificial Intelligence

Scientific news reports serve as a bridge, adeptly translating complex research articles into reports that resonate with the broader public. The automated generation of such narratives enhances the accessibility of scholarly insights. In this paper, we present a new corpus to facilitate this paradigm development. Our corpus comprises a parallel compilation of academic publications and their corresponding scientific news reports across nine disciplines. To demonstrate the utility and reliability of our dataset, we conduct an extensive analysis, highlighting the divergences in readability and brevity between scientific news narratives and academic manuscripts. We benchmark our dataset employing state-of-the-art text generation models. The evaluation process involves both automatic and human evaluation, which lays the groundwork for future explorations into the automated generation of scientific news reports. The dataset and code related to this work are available at https://dongqi.me/projects/SciNews.


Denoising Table-Text Retrieval for Open-Domain Question Answering

arXiv.org Artificial Intelligence

In table-text open-domain question answering, a retriever system retrieves relevant evidence from tables and text to answer questions. Previous studies in table-text open-domain question answering have two common challenges: firstly, their retrievers can be affected by false-positive labels in training datasets; secondly, they may struggle to provide appropriate evidence for questions that require reasoning across the table. To address these issues, we propose Denoised Table-Text Retriever (DoTTeR). Our approach involves utilizing a denoised training dataset with fewer false positive labels by discarding instances with lower question-relevance scores measured through a false positive detection model. Subsequently, we integrate table-level ranking information into the retriever to assist in finding evidence for questions that demand reasoning across the table. To encode this ranking information, we fine-tune a rank-aware column encoder to identify minimum and maximum values within a column. Experimental results demonstrate that DoTTeR significantly outperforms strong baselines on both retrieval recall and downstream QA tasks. Our code is available at https://github.com/deokhk/DoTTeR.


Predicting risk of cardiovascular disease using retinal OCT imaging

arXiv.org Artificial Intelligence

Purpose: we investigated the potential of optical coherence tomography (OCT) as an additional imaging technique to predict future cardiovascular disease (CVD). Design: Retrospective cohort study Participants: We employed retinal optical coherence tomography (OCT) imaging data obtained from the UK Biobank. Data for 630 patients who suffered acute myocardial infarction (MI) or stroke within a 5-year interval after image acquisition, together with an equal number of participants without CVD (control group), were used to train our model (1260 subjects in total). Methods: We utilised a self-supervised deep learning approach based on Variational Autoencoders (VAE) to learn low-dimensional (latent) representations of high-dimensional 3D OCT images and to capture distinct characteristics of different retinal layers within the OCT image. A Random Forest (RF) classifier was subsequently trained using the learned latent features and participant demographic and clinical data, to differentiate between patients at risk of CVD events (MI or stroke) and non-CVD cases. Main Outcome Measures: Our predictive model, trained on multimodal data, was assessed based on its ability to correctly identify individuals likely to suffer from a CVD event (MI or stroke), within a 5-year interval after image acquisition. Results: Our self-supervised VAE feature selection and multimodal Random Forest classifier differentiate between patients at risk of future CVD events and the control group with an AUC of 0.75, outperforming the clinically established QRISK3 score (AUC = 0.597). The choroidal layer visible in OCT images was identified as an important predictor of future CVD events using a novel approach to model explanability. Conclusions: Retinal OCT imaging provides a cost-effective and non-invasive alternative to predict the risk of cardiovascular disease and is readily accessible in optometry practices and hospitals.


MEDDAP: Medical Dataset Enhancement via Diversified Augmentation Pipeline

arXiv.org Artificial Intelligence

The effectiveness of Deep Neural Networks (DNNs) heavily relies on the abundance and accuracy of available training data. However, collecting and annotating data on a large scale is often both costly and time-intensive, particularly in medical cases where practitioners are already occupied with their duties. Moreover, ensuring that the model remains robust across various scenarios of image capture is crucial in medical domains, especially when dealing with ultrasound images that vary based on the settings of different devices and the manual operation of the transducer. To address this challenge, we introduce a novel pipeline called MEDDAP, which leverages Stable Diffusion (SD) models to augment existing small datasets by automatically generating new informative labeled samples. Pretrained checkpoints for SD are typically based on natural images, and training them for medical images requires significant GPU resources due to their heavy parameters. To overcome this challenge, we introduce USLoRA (Ultrasound Low-Rank Adaptation), a novel fine-tuning method tailored specifically for ultrasound applications. USLoRA allows for selective fine-tuning of weights within SD, requiring fewer than 0.1\% of parameters compared to fully fine-tuning only the UNet portion of SD. To enhance dataset diversity, we incorporate different adjectives into the generation process prompts, thereby desensitizing the classifiers to intensity changes across different images. This approach is inspired by clinicians' decision-making processes regarding breast tumors, where tumor shape often plays a more crucial role than intensity. In conclusion, our pipeline not only outperforms classifiers trained on the original dataset but also demonstrates superior performance when encountering unseen datasets. The source code is available at https://github.com/yasamin-med/MEDDAP.


Recommendation of data-free class-incremental learning algorithms by simulating future data

arXiv.org Artificial Intelligence

Class-incremental learning deals with sequential data streams composed of batches of classes. Various algorithms have been proposed to address the challenging case where samples from past classes cannot be stored. However, selecting an appropriate algorithm for a user-defined setting is an open problem, as the relative performance of these algorithms depends on the incremental settings. To solve this problem, we introduce an algorithm recommendation method that simulates the future data stream. Given an initial set of classes, it leverages generative models to simulate future classes from the same visual domain. We evaluate recent algorithms on the simulated stream and recommend the one which performs best in the user-defined incremental setting. We illustrate the effectiveness of our method on three large datasets using six algorithms and six incremental settings. Our method outperforms competitive baselines, and performance is close to that of an oracle choosing the best algorithm in each setting. This work contributes to facilitate the practical deployment of incremental learning.


Image-based Novel Fault Detection with Deep Learning Classifiers using Hierarchical Labels

arXiv.org Artificial Intelligence

Many manufacturing systems are instrumented with image-sensing systems to monitor process performance and product quality. The low cost and rich information of the image-based sensing systems have led to high-dimensional data streams that provide distinctive opportunities for performance improvement. Among these, accurate process monitoring and fault classification are among the benefits gained from the rich information these image sensors can provide. In literature, process monitoring often refers to the step of detecting and isolating abnormal samples in a certain process. Normally, after process monitoring, fault classification is performed, and the isolated fault is classified into one or more known types of fault. Fault classification is an essential step within the process monitoring loop, at which point the type of detected and identified faults are determined (Chiang et al., 2001). Accurate fault classification can provide engineers with favorable information to isolate and diagnose system faults and anomalies to improve quality and maximize system efficiency. However, fault classification in manufacturing systems typically assumes a fixed set of fault modes. In this case, the existing fault classification model may make overconfident decisions or fail silently and, at certain times, dangerously for new unseen fault types.


Sparse Logistic Regression with High-order Features for Automatic Grammar Rule Extraction from Treebanks

arXiv.org Artificial Intelligence

Descriptive grammars are highly valuable, but writing them is time-consuming and difficult. Furthermore, while linguists typically use corpora to create them, grammar descriptions often lack quantitative data. As for formal grammars, they can be challenging to interpret. In this paper, we propose a new method to extract and explore significant fine-grained grammar patterns and potential syntactic grammar rules from treebanks, in order to create an easy-to-understand corpus-based grammar. More specifically, we extract descriptions and rules across different languages for two linguistic phenomena, agreement and word order, using a large search space and paying special attention to the ranking order of the extracted rules. For that, we use a linear classifier to extract the most salient features that predict the linguistic phenomena under study. We associate statistical information to each rule, and we compare the ranking of the model's results to those of other quantitative and statistical measures.


UCxn: Typologically Informed Annotation of Constructions Atop Universal Dependencies

arXiv.org Artificial Intelligence

The Universal Dependencies (UD) project has created an invaluable collection of treebanks with contributions in over 140 languages. However, the UD annotations do not tell the full story. Grammatical constructions that convey meaning through a particular combination of several morphosyntactic elements -- for example, interrogative sentences with special markers and/or word orders -- are not labeled holistically. We argue for (i) augmenting UD annotations with a 'UCxn' annotation layer for such meaning-bearing grammatical constructions, and (ii) approaching this in a typologically informed way so that morphosyntactic strategies can be compared across languages. As a case study, we consider five construction families in ten languages, identifying instances of each construction in UD treebanks through the use of morphosyntactic patterns. In addition to findings regarding these particular constructions, our study yields important insights on methodology for describing and identifying constructions in language-general and language-particular ways, and lays the foundation for future constructional enrichment of UD treebanks.


SciCapenter: Supporting Caption Composition for Scientific Figures with Machine-Generated Captions and Ratings

arXiv.org Artificial Intelligence

Crafting effective captions for figures is important. Readers heavily depend on these captions to grasp the figure's message. However, despite a well-developed set of AI technologies for figures and captions, these have rarely been tested for usefulness in aiding caption writing. This paper introduces SciCapenter, an interactive system that puts together cutting-edge AI technologies for scientific figure captions to aid caption composition. SciCapenter generates a variety of captions for each figure in a scholarly article, providing scores and a comprehensive checklist to assess caption quality across multiple critical aspects, such as helpfulness, OCR mention, key takeaways, and visual properties reference. Users can directly edit captions in SciCapenter, resubmit for revised evaluations, and iteratively refine them. A user study with Ph.D. students indicates that SciCapenter significantly lowers the cognitive load of caption writing. Participants' feedback further offers valuable design insights for future systems aiming to enhance caption writing.