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Near-optimal Swap Regret Minimization for Convex Losses

arXiv.org Machine Learning

We give a randomized online algorithm that guarantees near-optimal $\widetilde O(\sqrt T)$ expected swap regret against any sequence of $T$ adaptively chosen Lipschitz convex losses on the unit interval. This improves the previous best bound of $\widetilde O(T^{2/3})$ and answers an open question of Fishelson et al. [2025b]. In addition, our algorithm is efficient: it runs in $\mathsf{poly}(T)$ time. A key technical idea we develop to obtain this result is to discretize the unit interval into bins at multiple scales of granularity and simultaneously use all scales to make randomized predictions, which we call multi-scale binning and may be of independent interest. A direct corollary of our result is an efficient online algorithm for minimizing the calibration error for general elicitable properties. This result does not require the Lipschitzness assumption of the identification function needed in prior work, making it applicable to median calibration, for which we achieve the first $\widetilde O(\sqrt T)$ calibration error guarantee.


Schrödinger bridge problem via empirical risk minimization

arXiv.org Machine Learning

We study the Schrödinger bridge problem when the endpoint distributions are available only through samples. Classical computational approaches estimate Schrödinger potentials via Sinkhorn iterations on empirical measures and then construct a time-inhomogeneous drift by differentiating a kernel-smoothed dual solution. In contrast, we propose a learning-theoretic route: we rewrite the Schrödinger system in terms of a single positive transformed potential that satisfies a nonlinear fixed-point equation and estimate this potential by empirical risk minimization over a function class. We establish uniform concentration of the empirical risk around its population counterpart under sub-Gaussian assumptions on the reference kernel and terminal density. We plug the learned potential into a stochastic control representation of the bridge to generate samples. We illustrate performance of the suggested approach with numerical experiments.


GEMSS: A Variational Bayesian Method for Discovering Multiple Sparse Solutions in Classification and Regression Problems

arXiv.org Machine Learning

Selecting interpretable feature sets in underdetermined ($n \ll p$) and highly correlated regimes constitutes a fundamental challenge in data science, particularly when analyzing physical measurements. In such settings, multiple distinct sparse subsets may explain the response equally well. Identifying these alternatives is crucial for generating domain-specific insights into the underlying mechanisms, yet conventional methods typically isolate a single solution, obscuring the full spectrum of plausible explanations. We present GEMSS (Gaussian Ensemble for Multiple Sparse Solutions), a variational Bayesian framework specifically designed to simultaneously discover multiple, diverse sparse feature combinations. The method employs a structured spike-and-slab prior for sparsity, a mixture of Gaussians to approximate the intractable multimodal posterior, and a Jaccard-based penalty to further control solution diversity. Unlike sequential greedy approaches, GEMSS optimizes the entire ensemble of solutions within a single objective function via stochastic gradient descent. The method is validated on a comprehensive benchmark comprising 128 synthetic experiments across classification and regression tasks. Results demonstrate that GEMSS scales effectively to high-dimensional settings ($p=5000$) with sample size as small as $n = 50$, generalizes seamlessly to continuous targets, handles missing data natively, and exhibits remarkable robustness to class imbalance and Gaussian noise. GEMSS is available as a Python package 'gemss' at PyPI. The full GitHub repository at https://github.com/kat-er-ina/gemss/ also includes a free, easy-to-use application suitable for non-coders.


Statistical inference after variable selection in Cox models: A simulation study

arXiv.org Machine Learning

Choosing relevant predictors is central to the analysis of biomedical time-to-event data. Classical frequentist inference, however, presumes that the set of covariates is fixed in advance and does not account for data-driven variable selection. As a consequence, naive post-selection inference may be biased and misleading. In right-censored survival settings, these issues may be further exacerbated by the additional uncertainty induced by censoring. We investigate several inference procedures applied after variable selection for the coefficients of the Lasso and its extension, the adaptive Lasso, in the context of the Cox model. The methods considered include sample splitting, exact post-selection inference, and the debiased Lasso. Their performance is examined in a neutral simulation study reflecting realistic covariate structures and censoring rates commonly encountered in biomedical applications. To complement the simulation results, we illustrate the practical behavior of these procedures in an applied example using a publicly available survival dataset.


Cutting Through the Noise: On-the-fly Outlier Detection for Robust Training of Machine Learning Interatomic Potentials

arXiv.org Machine Learning

The accuracy of machine learning interatomic potentials suffers from reference data that contains numerical noise. Often originating from unconverged or inconsistent electronic-structure calculations, this noise is challenging to identify. Existing mitigation strategies such as manual filtering or iterative refinement of outliers, require either substantial expert effort or multiple expensive retraining cycles, making them difficult to scale to large datasets. Here, we introduce an on-the-fly outlier detection scheme that automatically down-weights noisy samples, without requiring additional reference calculations. By tracking the loss distribution via an exponential moving average, this unsupervised method identifies outliers throughout a single training run. We show that this approach prevents overfitting and matches the performance of iterative refinement baselines with significantly reduced overhead. The method's effectiveness is demonstrated by recovering accurate physical observables for liquid water from unconverged reference data, including diffusion coefficients. Furthermore, we validate its scalability by training a foundation model for organic chemistry on the SPICE dataset, where it reduces energy errors by a factor of three. This framework provides a simple, automated solution for training robust models on imperfect datasets across dataset sizes.


Graph-based Semi-Supervised Learning via Maximum Discrimination

arXiv.org Machine Learning

Semi-supervised learning (SSL) addresses the critical challenge of training accurate models when labeled data is scarce but unlabeled data is abundant. Graph-based SSL (GSSL) has emerged as a popular framework that captures data structure through graph representations. Classic graph SSL methods, such as Label Propagation and Label Spreading, aim to compute low-dimensional representations where points with the same labels are close in representation space. Although often effective, these methods can be suboptimal on data with complex label distributions. In our work, we develop AUC-spec, a graph approach that computes a low-dimensional representation that maximizes class separation. We compute this representation by optimizing the Area Under the ROC Curve (AUC) as estimated via the labeled points. We provide a detailed analysis of our approach under a product-of-manifold model, and show that the required number of labeled points for AUC-spec is polynomial in the model parameters. Empirically, we show that AUC-spec balances class separation with graph smoothness. It demonstrates competitive results on synthetic and real-world datasets while maintaining computational efficiency comparable to the field's classic and state-of-the-art methods.


CauScale: Neural Causal Discovery at Scale

arXiv.org Machine Learning

Causal discovery is essential for advancing data-driven fields such as scientific AI and data analysis, yet existing approaches face significant time- and space-efficiency bottlenecks when scaling to large graphs. To address this challenge, we present CauScale, a neural architecture designed for efficient causal discovery that scales inference to graphs with up to 1000 nodes. CauScale improves time efficiency via a reduction unit that compresses data embeddings and improves space efficiency by adopting tied attention weights to avoid maintaining axis-specific attention maps. To keep high causal discovery accuracy, CauScale adopts a two-stream design: a data stream extracts relational evidence from high-dimensional observations, while a graph stream integrates statistical graph priors and preserves key structural signals. CauScale successfully scales to 500-node graphs during training, where prior work fails due to space limitations. Across testing data with varying graph scales and causal mechanisms, CauScale achieves 99.6% mAP on in-distribution data and 84.4% on out-of-distribution data, while delivering 4-13,000 times inference speedups over prior methods. Our project page is at https://github.com/OpenCausaLab/CauScale.


Discrete Adjoint Schrödinger Bridge Sampler

arXiv.org Machine Learning

Learning discrete neural samplers is challenging due to the lack of gradients and combinatorial complexity. While stochastic optimal control (SOC) and Schrödinger bridge (SB) provide principled solutions, efficient SOC solvers like adjoint matching (AM), which excel in continuous domains, remain unexplored for discrete spaces. We bridge this gap by revealing that the core mechanism of AM is $\mathit{state}\text{-}\mathit{space~agnostic}$, and introduce $\mathbf{discrete~ASBS}$, a unified framework that extends AM and adjoint Schrödinger bridge sampler (ASBS) to discrete spaces. Theoretically, we analyze the optimality conditions of the discrete SB problem and its connection to SOC, identifying a necessary cyclic group structure on the state space to enable this extension. Empirically, discrete ASBS achieves competitive sample quality with significant advantages in training efficiency and scalability.


CausalCompass: Evaluating the Robustness of Time-Series Causal Discovery in Misspecified Scenarios

arXiv.org Machine Learning

Causal discovery from time series is a fundamental task in machine learning. However, its widespread adoption is hindered by a reliance on untestable causal assumptions and by the lack of robustness-oriented evaluation in existing benchmarks. To address these challenges, we propose CausalCompass, a flexible and extensible benchmark suite designed to assess the robustness of time-series causal discovery (TSCD) methods under violations of modeling assumptions. To demonstrate the practical utility of CausalCompass, we conduct extensive benchmarking of representative TSCD algorithms across eight assumption-violation scenarios. Our experimental results indicate that no single method consistently attains optimal performance across all settings. Nevertheless, the methods exhibiting superior overall performance across diverse scenarios are almost invariably deep learning-based approaches. We further provide hyperparameter sensitivity analyses to deepen the understanding of these findings. We also find, somewhat surprisingly, that NTS-NOTEARS relies heavily on standardized preprocessing in practice, performing poorly in the vanilla setting but exhibiting strong performance after standardization. Finally, our work aims to provide a comprehensive and systematic evaluation of TSCD methods under assumption violations, thereby facilitating their broader adoption in real-world applications. The code and datasets are available at https://github.com/huiyang-yi/CausalCompass.


Fast and Robust Likelihood-Guided Diffusion Posterior Sampling with Amortized Variational Inference

arXiv.org Machine Learning

Zero-shot diffusion posterior sampling offers a flexible framework for inverse problems by accommodating arbitrary degradation operators at test time, but incurs high computational cost due to repeated likelihood-guided updates. In contrast, previous amortized diffusion approaches enable fast inference by replacing likelihood-based sampling with implicit inference models, but at the expense of robustness to unseen degradations. We introduce an amortization strategy for diffusion posterior sampling that preserves explicit likelihood guidance by amortizing the inner optimization problems arising in variational diffusion posterior sampling. This accelerates inference for in-distribution degradations while maintaining robustness to previously unseen operators, thereby improving the trade-off between efficiency and flexibility in diffusion-based inverse problems.