The integration of multi-omics data presents a major challenge in precision medicine, requiring advanced computational methods for accurate disease classification and biological interpretation. This study introduces the Multi-Omics Graph Kolmogorov-Arnold Network (MOGKAN), a deep learning model that integrates messenger RNA, micro RNA sequences, and DNA methylation data with Protein-Protein Interaction (PPI) networks for accurate and interpretable cancer classification across 31 cancer types. MOGKAN employs a hybrid approach combining differential expression with DESeq2, Linear Models for Microarray (LIMMA), and Least Absolute Shrinkage and Selection Operator (LASSO) regression to reduce multi-omics data dimensionality while preserving relevant biological features. The model architecture is based on the Kolmogorov-Arnold theorem principle, using trainable univariate functions to enhance interpretability and feature analysis. MOGKAN achieves classification accuracy of 96.28 percent and demonstrates low experimental variability with a standard deviation that is reduced by 1.58 to 7.30 percents compared to Convolutional Neural Networks (CNNs) and Graph Neural Networks (GNNs). The biomarkers identified by MOGKAN have been validated as cancer-related markers through Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. The proposed model presents an ability to uncover molecular oncogenesis mechanisms by detecting phosphoinositide-binding substances and regulating sphingolipid cellular processes. By integrating multi-omics data with graph-based deep learning, our proposed approach demonstrates superior predictive performance and interpretability that has the potential to enhance the translation of complex multi-omics data into clinically actionable cancer diagnostics.

Congenital heart disease (CHD) is a critical condition that demands early detection, particularly in infancy and childhood. This study presents a deep learning model designed to detect CHD using phonocardiogram (PCG) signals, with a focus on its application in global health. We evaluated our model on several datasets, including the primary dataset from Bangladesh, achieving a high accuracy of 94.1%, sensitivity of 92.7%, specificity of 96.3%. The model also demonstrated robust performance on the public PhysioNet Challenge 2022 and 2016 datasets, underscoring its generalizability to diverse populations and data sources. We assessed the performance of the algorithm for single and multiple auscultation sites on the chest, demonstrating that the model maintains over 85% accuracy even when using a single location. Furthermore, our algorithm was able to achieve an accuracy of 80% on low-quality recordings, which cardiologists deemed non-diagnostic. This research suggests that an AI- driven digital stethoscope could serve as a cost-effective screening tool for CHD in resource-limited settings, enhancing clinical decision support and ultimately improving patient outcomes.

Recent shifts in the space of large language model (LLM) research have shown an increasing focus on novel architectures to compete with prototypical Transformer-based models that have long dominated this space. Linear recurrent models have proven to be a viable competitor due to their computational efficiency. However, such models still demonstrate a sizable gap compared to Transformers in terms of in-context learning among other tasks that require recalling information from a context. In this work, we introduce __Resona__, a simple and scalable framework for augmenting linear recurrent models with retrieval. __Resona__~augments models with the ability to integrate retrieved information from the provided input context, enabling tailored behavior to diverse task requirements. Experiments on a variety of linear recurrent models demonstrate that __Resona__-augmented models observe significant performance gains on a variety of synthetic as well as real-world natural language tasks, highlighting its ability to act as a general purpose method to improve the in-context learning and language modeling abilities of linear recurrent LLMs.

Tweets provides valuable semantic context for earth observation tasks and serves as a complementary modality to remote sensing imagery. In building function classification (BFC), tweets are often collected using geographic heuristics and labeled via external databases, an inherently weakly supervised process that introduces both label noise and sentence level feature noise (e.g., irrelevant or uninformative tweets). While label noise has been widely studied, the impact of sentence level feature noise remains underexplored, largely due to the lack of clean benchmark datasets for controlled analysis. In this work, we propose a method for generating a synthetic oracle dataset using LLM, designed to contain only tweets that are both correctly labeled and semantically relevant to their associated buildings. This oracle dataset enables systematic investigation of noise impacts that are otherwise difficult to isolate in real-world data. To assess its utility, we compare model performance using Naive Bayes and mBERT classifiers under three configurations: real vs. synthetic training data, and cross-domain generalization. Results show that noise in real tweets significantly degrades the contextual learning capacity of mBERT, reducing its performance to that of a simple keyword-based model. In contrast, the clean synthetic dataset allows mBERT to learn effectively, outperforming Naive Bayes Bayes by a large margin. These findings highlight that addressing feature noise is more critical than model complexity in this task. Our synthetic dataset offers a novel experimental environment for future noise injection studies and is publicly available on GitHub.

Long-term groundwater level (GWL) measurement is vital for effective policymaking and recharge estimation using annual maxima and minima. However, current methods prioritize short-term predictions and lack multi-year applicability, limiting their utility. Moreover, sparse in-situ measurements lead to reliance on low-resolution satellite data like GLDAS as the ground truth for Machine Learning models, further constraining accuracy. To overcome these challenges, we first develop an ML model to mitigate data gaps, achieving $R^2$ scores of 0.855 and 0.963 for maximum and minimum GWL predictions, respectively. Subsequently, using these predictions and well observations as ground truth, we train an Upsampling Model that uses low-resolution (25 km) GLDAS data as input to produce high-resolution (2 km) GWLs, achieving an excellent $R^2$ score of 0.96. Our approach successfully upscales GLDAS data for 2003-2024, allowing high-resolution recharge estimations and revealing critical trends for proactive resource management. Our method allows upsampling of groundwater storage (GWS) from GLDAS to high-resolution GWLs for any points independently of officially curated piezometer data, making it a valuable tool for decision-making.

Data-driven storytelling has gained prominence in journalism and other data reporting fields. However, the process of creating these stories remains challenging, often requiring the integration of effective visualizations with compelling narratives to form a cohesive, interactive presentation. To help streamline this process, we present an integrated authoring framework and system, DataWeaver, that supports both visualization-to-text and text-to-visualization composition. DataWeaver enables users to create data narratives anchored to data facts derived from "call-out" interactions, i.e., user-initiated highlights of visualization elements that prompt relevant narrative content. In addition to this "vis-to-text" composition, DataWeaver also supports a "text-initiated" approach, generating relevant interactive visualizations from existing narratives. Key findings from an evaluation with 13 participants highlighted the utility and usability of DataWeaver and the effectiveness of its integrated authoring framework. The evaluation also revealed opportunities to enhance the framework by refining filtering mechanisms and visualization recommendations and better support authoring creativity by introducing advanced customization options.

Understanding and mitigating hallucinations in Large Language Models (LLMs) is crucial for ensuring reliable content generation. While previous research has primarily focused on "when" LLMs hallucinate, our work explains "why" and directly links model behaviour to the pre-training data that forms their prior knowledge. Specifically, we demonstrate that an asymmetry exists in the recognition of logically equivalent facts, which can be attributed to frequency discrepancies of entities appearing as subjects versus objects. Given that most pre-training datasets are inaccessible, we leverage the fully open-source OLMo series by indexing its Dolma dataset to estimate entity frequencies. Using relational facts (represented as triples) from Wikidata5M, we construct probing datasets to isolate this effect. Our experiments reveal that facts with a high-frequency subject and a low-frequency object are better recognised than their inverse, despite their logical equivalence. The pattern reverses in low-to-high frequency settings, and no statistically significant asymmetry emerges when both entities are high-frequency. These findings highlight the influential role of pre-training data in shaping model predictions and provide insights for inferring the characteristics of pre-training data in closed or partially closed LLMs.

This paper introduces the largest and most comprehensive dataset of US presidential campaign television advertisements, available in digital format. The dataset also includes machine-searchable transcripts and high-quality summaries designed to facilitate a variety of academic research. To date, there has been great interest in collecting and analyzing US presidential campaign advertisements, but the need for manual procurement and annotation led many to rely on smaller subsets. We design a large-scale parallelized, AI-based analysis pipeline that automates the laborious process of preparing, transcribing, and summarizing videos. We then apply this methodology to the 9,707 presidential ads from the Julian P. Kanter Political Commercial Archive. We conduct extensive human evaluations to show that these transcripts and summaries match the quality of manually generated alternatives. We illustrate the value of this data by including an application that tracks the genesis and evolution of current focal issue areas over seven decades of presidential elections. Our analysis pipeline and codebase also show how to use LLM-based tools to obtain high-quality summaries for other video datasets.

We show that the behavior of stochastic gradient descent is related to Bayesian statistics by showing that SGD is effectively diffusion on a fractal landscape, where the fractal dimension can be accounted for in a purely Bayesian way. By doing this we show that SGD can be regarded as a modified Bayesian sampler which accounts for accessibility constraints induced by the fractal structure of the loss landscape. We verify our results experimentally by examining the diffusion of weights during training. These results offer insight into the factors which determine the learning process, and seemingly answer the question of how SGD and purely Bayesian sampling are related.

Efficient nutrient management and precise fertilization are essential for advancing modern agriculture, particularly in regions striving to optimize crop yields sustainably. The AgroLens project endeavors to address this challenge by develop ing Machine Learning (ML)-based methodologies to predict soil nutrient levels without reliance on laboratory tests. By leveraging state of the art techniques, the project lays a foundation for acionable insights to improve agricultural productivity in resource-constrained areas, such as Africa. The approach begins with the development of a robust European model using the LUCAS Soil dataset and Sentinel-2 satellite imagery to estimate key soil properties, including phosphorus, potassium, nitrogen, and pH levels. This model is then enhanced by integrating supplementary features, such as weather data, harvest rates, and Clay AI-generated embeddings. This report details the methodological framework, data preprocessing strategies, and ML pipelines employed in this project. Advanced algorithms, including Random Forests, Extreme Gradient Boosting (XGBoost), and Fully Connected Neural Networks (FCNN), were implemented and finetuned for precise nutrient prediction. Results showcase robust model performance, with root mean square error values meeting stringent accuracy thresholds. By establishing a reproducible and scalable pipeline for soil nutrient prediction, this research paves the way for transformative agricultural applications, including precision fertilization and improved resource allocation in underresourced regions like Africa.