We show that deconfounding the similarity metrics increases the resolution of detecting functionally similar neural networks across domains.

Multi-task learning (MTL) has become an essential machine learning tool for addressing multiple learning tasks simultaneously and has been effectively applied across fields such as healthcare, marketing, and biomedical research. However, to enable efficient information sharing across tasks, it is crucial to leverage both shared and heterogeneous information. Despite extensive research on MTL, various forms of heterogeneity, including distribution and posterior heterogeneity, present significant challenges. Existing methods often fail to address these forms of heterogeneity within a unified framework. In this paper, we propose a dual-encoder framework to construct a heterogeneous latent factor space for each task, incorporating a task-shared encoder to capture common information across tasks and a task-specific encoder to preserve unique task characteristics. Additionally, we explore the intrinsic similarity structure of the coefficients corresponding to learned latent factors, allowing for adaptive integration across tasks to manage posterior heterogeneity. We introduce a unified algorithm that alternately learns the task-specific and task-shared encoders and coefficients. In theory, we investigate the excess risk bound for the proposed MTL method using local Rademacher complexity and apply it to a new but related task. Through simulation studies, we demonstrate that the proposed method outperforms existing data integration methods across various settings. Furthermore, the proposed method achieves superior predictive performance for time to tumor doubling across five distinct cancer types in PDX data.

Recent studies have revealed that human emotions exhibit a high-dimensional, complex structure. A full capturing of this complexity requires new approaches, as conventional models that disregard high dimensionality risk overlooking key nuances of human emotions. Here, we examined the extent to which the latest generation of rapidly evolving Multimodal Large Language Models (MLLMs) capture these high-dimensional, intricate emotion structures, including capabilities and limitations. Specifically, we compared self-reported emotion ratings from participants watching videos with model-generated estimates (e.g., Gemini or GPT). We evaluated performance not only at the individual video level but also from emotion structures that account for inter-video relationships. At the level of simple correlation between emotion structures, our results demonstrated strong similarity between human and model-inferred emotion structures. To further explore whether the similarity between humans and models is at the signle item level or the coarse-categorical level, we applied Gromov Wasserstein Optimal Transport. We found that although performance was not necessarily high at the strict, single-item level, performance across video categories that elicit similar emotions was substantial, indicating that the model could infer human emotional experiences at the category level. Our results suggest that current state-of-the-art MLLMs broadly capture the complex high-dimensional emotion structures at the category level, as well as their apparent limitations in accurately capturing entire structures at the single-item level.

Informative representations enhance model performance and generalisability in downstream tasks. However, learning self-supervised representations for spatially characterised time series, like traffic interactions, poses challenges as it requires maintaining fine-grained similarity relations in the latent space. In this study, we incorporate two structure-preserving regularisers for the contrastive learning of spatial time series: one regulariser preserves the topology of similarities between instances, and the other preserves the graph geometry of similarities across spatial and temporal dimensions. To balance contrastive learning and structure preservation, we propose a dynamic mechanism that adaptively weighs the trade-off and stabilises training. We conduct experiments on multivariate time series classification, as well as macroscopic and microscopic traffic prediction. For all three tasks, our approach preserves the structures of similarity relations more effectively and improves state-of-the-art task performances. The proposed approach can be applied to an arbitrary encoder and is particularly beneficial for time series with spatial or geographical features. Furthermore, this study suggests that higher similarity structure preservation indicates more informative and useful representations. This may help to understand the contribution of representation learning in pattern recognition with neural networks. Our code is made openly accessible with all resulting data at https://github.com/yiru-jiao/spclt.

We consider a model of learning and evolution in games whose action sets are endowed with a partition-based similarity structure intended to capture exogenous similarities between strategies. In this model, revising agents have a higher probability of comparing their current strategy with other strategies that they deem similar, and they switch to the observed strategy with probability proportional to its payoff excess. Because of this implicit bias toward similar strategies, the resulting dynamics - which we call the nested replicator dynamics - do not satisfy any of the standard monotonicity postulates for imitative game dynamics; nonetheless, we show that they retain the main long-run rationality properties of the replicator dynamics, albeit at quantitatively different rates. We also show that the induced dynamics can be viewed as a stimulus-response model in the spirit of Erev & Roth (1998), with choice probabilities given by the nested logit choice rule of Ben-Akiva (1973) and McFadden (1978). This result generalizes an existing relation between the replicator dynamics and the exponential weights algorithm in online learning, and provides an additional layer of interpretation to our analysis and results.

Semantic embeddings play a crucial role in natural language-based information retrieval. Embedding models represent words and contexts as vectors whose spatial configuration is derived from the distribution of words in large text corpora. While such representations are generally very powerful, they might fail to account for fine-grained domain-specific nuances. In this article, we investigate this uncertainty for the domain of characterizations of expressive piano performance. Using a music research dataset of free text performance characterizations and a follow-up study sorting the annotations into clusters, we derive a ground truth for a domain-specific semantic similarity structure. We test five embedding models and their similarity structure for correspondence with the ground truth. We further assess the effects of contextualizing prompts, hubness reduction, cross-modal similarity, and k-means clustering. The quality of embedding models shows great variability with respect to this task; more general models perform better than domain-adapted ones and the best model configurations reach human-level agreement.

Despite significant progress, previous multi-view unsupervised feature selection methods mostly suffer from two limitations. First, they generally utilize either cluster structure or similarity structure to guide the feature selection, which neglect the possibility of a joint formulation with mutual benefits. Second, they often learn the similarity structure by either global structure learning or local structure learning, which lack the capability of graph learning with both global and local structural awareness. In light of this, this paper presents a joint multi-view unsupervised feature selection and graph learning (JMVFG) approach. Particularly, we formulate the multi-view feature selection with orthogonal decomposition, where each target matrix is decomposed into a view-specific basis matrix and a view-consistent cluster indicator. The cross-space locality preservation is incorporated to bridge the cluster structure learning in the projected space and the similarity learning (i.e., graph learning) in the original space. Further, a unified objective function is presented to enable the simultaneous learning of the cluster structure, the global and local similarity structures, and the multi-view consistency and inconsistency, upon which an alternating optimization algorithm is developed with theoretically proved convergence. Extensive experiments on a variety of real-world multi-view datasets demonstrate the superiority of our approach for both the multi-view feature selection and graph learning tasks. The code is available at https://github.com/huangdonghere/JMVFG.

Similarity metrics such as representational similarity analysis (RSA) and centered kernel alignment (CKA) have been used to compare layer-wise representations between neural networks. However, these metrics are confounded by the population structure of data items in the input space, leading to spuriously high similarity for even completely random neural networks and inconsistent domain relations in transfer learning. We introduce a simple and generally applicable fix to adjust for the confounder with covariate adjustment regression, which retains the intuitive invariance properties of the original similarity measures. We show that deconfounding the similarity metrics increases the resolution of detecting semantically similar neural networks. Moreover, in real-world applications, deconfounding improves the consistency of representation similarities with domain similarities in transfer learning, and increases correlation with out-of-distribution accuracy.