seizure type
SzCORE: A Seizure Community Open-source Research Evaluation framework for the validation of EEG-based automated seizure detection algorithms
Dan, Jonathan, Pale, Una, Amirshahi, Alireza, Cappelletti, William, Ingolfsson, Thorir Mar, Wang, Xiaying, Cossettini, Andrea, Bernini, Adriano, Benini, Luca, Beniczky, Sándor, Atienza, David, Ryvlin, Philippe
The need for high-quality automated seizure detection algorithms based on electroencephalography (EEG) becomes ever more pressing with the increasing use of ambulatory and long-term EEG monitoring. Heterogeneity in validation methods of these algorithms influences the reported results and makes comprehensive evaluation and comparison challenging. This heterogeneity concerns in particular the choice of datasets, evaluation methodologies, and performance metrics. In this paper, we propose a unified framework designed to establish standardization in the validation of EEG-based seizure detection algorithms. Based on existing guidelines and recommendations, the framework introduces a set of recommendations and standards related to datasets, file formats, EEG data input content, seizure annotation input and output, cross-validation strategies, and performance metrics. We also propose the 10-20 seizure detection benchmark, a machine-learning benchmark based on public datasets converted to a standardized format. This benchmark defines the machine-learning task as well as reporting metrics. We illustrate the use of the benchmark by evaluating a set of existing seizure detection algorithms. The SzCORE (Seizure Community Open-source Research Evaluation) framework and benchmark are made publicly available along with an open-source software library to facilitate research use, while enabling rigorous evaluation of the clinical significance of the algorithms, fostering a collective effort to more optimally detect seizures to improve the lives of people with epilepsy.
Towards trustworthy seizure onset detection using workflow notes
Saab, Khaled, Tang, Siyi, Taha, Mohamed, Lee-Messer, Christopher, Ré, Christopher, Rubin, Daniel
A major barrier to deploying healthcare AI models is their trustworthiness. One form of trustworthiness is a model's robustness across different subgroups: while existing models may exhibit expert-level performance on aggregate metrics, they often rely on non-causal features, leading to errors in hidden subgroups. To take a step closer towards trustworthy seizure onset detection from EEG, we propose to leverage annotations that are produced by healthcare personnel in routine clinical workflows -- which we refer to as workflow notes -- that include multiple event descriptions beyond seizures. Using workflow notes, we first show that by scaling training data to an unprecedented level of 68,920 EEG hours, seizure onset detection performance significantly improves (+12.3 AUROC points) compared to relying on smaller training sets with expensive manual gold-standard labels. Second, we reveal that our binary seizure onset detection model underperforms on clinically relevant subgroups (e.g., up to a margin of 6.5 AUROC points between pediatrics and adults), while having significantly higher false positives on EEG clips showing non-epileptiform abnormalities compared to any EEG clip (+19 FPR points). To improve model robustness to hidden subgroups, we train a multilabel model that classifies 26 attributes other than seizures, such as spikes, slowing, and movement artifacts. We find that our multilabel model significantly improves overall seizure onset detection performance (+5.9 AUROC points) while greatly improving performance among subgroups (up to +8.3 AUROC points), and decreases false positives on non-epileptiform abnormalities by 8 FPR points. Finally, we propose a clinical utility metric based on false positives per 24 EEG hours and find that our multilabel model improves this clinical utility metric by a factor of 2x across different clinical settings.
Epileptic Seizure Classification Using Combined Labels and a Genetic Algorithm
Davidson, Scot, McCallan, Niamh, Ng, Kok Yew, Biglarbeigi, Pardis, Finlay, Dewar, Lan, Boon Leong, McLaughlin, James
Epilepsy affects 50 million people worldwide and is one of the most common serious neurological disorders. Seizure detection and classification is a valuable tool for diagnosing and maintaining the condition. An automated classification algorithm will allow for accurate diagnosis. Utilising the Temple University Hospital (TUH) Seizure Corpus, six seizure types are compared; absence, complex partial, myoclonic, simple partial, tonic and tonic- clonic models. This study proposes a method that utilises unique features with a novel parallel classifier - Parallel Genetic Naive Bayes (NB) Seizure Classifier (PGNBSC). The PGNBSC algorithm searches through the features and by reclassifying the data each time, the algorithm will create a matrix for optimum search criteria. Ictal states from the EEGs are segmented into 1.8 s windows, where the epochs are then further decomposed into 13 different features from the first intrinsic mode function (IMF). The features are compared using an original NB classifier in the first model. This is improved upon in a second model by using a genetic algorithm (Binary Grey Wolf Optimisation, Option 1) with a NB classifier. The third model uses a combination of the simple partial and complex partial seizures to provide the highest classification accuracy for each of the six seizures amongst the three models (20%, 53%, and 85% for first, second, and third model, respectively).
Seizure detection using wearable sensors and machine learning: Setting a benchmark
Epilepsy is a common cause of morbidity and mortality, especially among children, despite advances in management regimens.1, 2 Accurate monitoring and tracking of seizures are important to evaluate seizure burden, recurrence risk, and response to treatment. Outside the hospital, seizure tracking relies on patients' and families' self-reporting, which is often unreliable due to underreporting, seizures missed by caregivers, and patients' difficulties recalling seizures.3-6 Although long-term video-electroencephalography (EEG) in the epilepsy monitoring unit (EMU) is the gold standard for accurately diagnosing and evaluating epilepsy,7 it is also time-consuming and costly, can be perceived as stigmatizing, and places a greater burden on patients and caregivers than seizure monitoring with wearable devices. Based on prior studies, there exists a large clinical gap and urgent medical need to detect a broad range of seizures, beyond focal to bilateral tonic–clonic seizures (FBTCSs) and generalized tonic–clonic seizures (GTCSs), with wearable devices.3, Recent advances in the use and development of non-EEG-based seizure detection devices utilizing a variety of sensors and modalities provided innovative opportunities to fill this gap and to monitor patients continuously in the outpatient setting.
Artificial Intelligence May Speed up Epilepsy Diagnoses, Study...
A newly developed artificial intelligence (AI) system could help expedite the diagnosis of epileptic conditions such as Dravet syndrome. The AI system was described in a study, titled "A propositional AI system for supporting epilepsy diagnosis based on the 2017 epilepsy classification: Illustrated by Dravet syndrome," in the journal Epilepsy & Behavior. Epilepsy is a broad disease category for many different conditions that involve seizures. Properly diagnosing epileptic conditions can be a challenge, especially given their different causes and symptoms. For example, mutations in the SCN1A gene are the most common cause of Dravet syndrome, but not all people with Dravet syndrome have such mutations, and SCN1A mutations can also be associated with other conditions, such as febrile seizures plus.
IBM's AI classifies seizures with 98.4% accuracy using EEG data
In a paper published on the preprint server Arxiv.org this week, IBM researchers describe SeizureNet, a machine learning framework that learns the features of seizures to classify various types. They say that it achieves state-of-the-art classification accuracy on a popular data set, and that it helps to improve the classification accuracy of smaller networks for applications with low memory and faster inference. If the claims stand up to academic scrutiny, the framework could, for instance, help the over 3.4 million people with epilepsy better understand the factors that trigger their seizures. The World Health Organization estimates that up to 70% of people living with epilepsy could live seizure-free if properly diagnosed and treated. SeizureNet is a machine learning framework consisting of individual classifiers (specifically convolutional neural networks) that learn the features of electroencephalograms (EEGs) -- i.e., tests that evaluate the electrical activity in the brain -- to predict seizure types.
IBM's AI classifies seizure types to help people with epilepsy
About 1.2 percent of people in the U.S. -- and 3.4 million worldwide -- have active epilepsy, and roughly one in 26 people will develop it in their lifetime. Not all suffer seizures the same -- and for a third of patients, no medical treatment options exist. As for the remaining two thirds, the available treatments don't always behave predictably, owing to the condition's individualized nature. Lack of measurement is a long-standing barrier to better outcomes. Studies show that one common source of data -- written diaries -- tends to be only 50 percent accurate.
The Temple University Hospital Seizure Detection Corpus
Shah, Vinit, von Weltin, Eva, Lopez, Silvia, McHugh, James Riley, Veloso, Lily, Golmohammadi, Meysam, Obeid, Iyad, Picone, Joseph
Keywords: EEG, electroencephalogram, seizure detection, machine learning The electroencephalogram (EEG), which has been in clinical use for over 70 years, is still an essential tool for diagnosis of neural functioning (Kennett, 2012). Well-known applications of EEGs include identification of epilepsy and epileptic seizures, anoxic and hypoxic damage to the brain, and identification of neural disorders such as hemorrhagic stroke, ischemia and toxic metabolic encephalopathy (Drury, 1988). More recently there has been interest in diagnosing Alzheimer's (Tsolaki et al., 2014), head trauma (Rapp et al., 2015) and sleep disorders (Younes, 2017). Many of these clinical applications now involve the collection of large amounts of data (e.g., 72-hour continuous EEG recordings), which makes manual interpretation challenging. Similarly, the increased use of EEGs in critical care has created a significant demand for high-performance automatic interpretation software (e.g., real-time seizure detection).