We also introduce a novel benchmark for evaluating NNPs in molecular property prediction, Hamiltonian prediction, and conformational optimization tasks.

The rapid growth of high-resolution scientific simulations and observation systems is generating massive spatiotemporal datasets, making efficient, error-bounded compression increasingly important. Meanwhile, decoder-only large language models (LLMs) have demonstrated remarkable capabilities in modeling complex sequential data. In this paper, we propose LLMCOMP, a novel lossy compression paradigm that leverages decoder-only large LLMs to model scientific data. LLMCOMP first quantizes 3D fields into discrete tokens, arranges them via Z-order curves to preserve locality, and applies coverage-guided sampling to enhance training efficiency. An autoregressive transformer is then trained with spatial-temporal embeddings to model token transitions. During compression, the model performs top-k prediction, storing only rank indices and fallback corrections to ensure strict error bounds. Experiments on multiple reanalysis datasets show that LLMCOMP consistently outperforms state-of-the-art compressors, achieving up to 30% higher compression ratios under strict error bounds. These results highlight the potential of LLMs as general-purpose compressors for high-fidelity scientific data.

The purpose of this study is to present and compare three denoising diffusion probabilistic models (DDPMs) that generate 3D $T_1$-weighted MRI human brain images. Three DDPMs were trained using 80,675 image volumes from 42,406 subjects spanning 38 publicly available brain MRI datasets. These images had approximately 1 mm isotropic resolution and were manually inspected by three human experts to exclude those with poor quality, field-of-view issues, and excessive pathology. The images were minimally preprocessed to preserve the visual variability of the data. Furthermore, to enable the DDPMs to produce images with natural orientation variations and inhomogeneity, the images were neither registered to a common coordinate system nor bias field corrected. Evaluations included segmentation, Frechet Inception Distance (FID), and qualitative inspection. Regarding results, all three DDPMs generated coherent MR brain volumes. The velocity and flow prediction models achieved lower FIDs than the sample prediction model. However, all three models had higher FIDs compared to real images across multiple cohorts. In a permutation experiment, the generated brain regional volume distributions differed statistically from real data. However, the velocity and flow prediction models had fewer statistically different volume distributions in the thalamus and putamen. In conclusion this work presents and releases the first 3D non-latent diffusion model for brain data without skullstripping or registration. Despite the negative results in statistical testing, the presented DDPMs are capable of generating high-resolution 3D $T_1$-weighted brain images. All model weights and corresponding inference code are publicly available at https://github.com/piksl-research/medforj .

The integration of brain-computer interfaces (BCIs), in particular electroen-cephalography (EEG), with artificial intelligence (AI) has shown tremendous promise in decoding human cognition and behavior from neural signals. In particular, the rise of multimodal AI models have brought new possibilities that have never been imagined before. Here, we present EgoBrain-the world's first large-scale, temporally aligned multimodal dataset that synchronizes egocentric vision and EEG of human brain over extended periods of time, establishing a new paradigm for human-centered behavior analysis. This dataset comprises 61 hours of synchronized 32-channel EEG recordings and first-person video from 40 participants engaged in 29 categories of daily activities. We then developed a muiltimodal learning framework to fuse EEG and vision for action understanding, validated across both cross-subject and cross-environment challenges, achieving an action recognition accuracy of 66.70%. EgoBrain paves the way for a unified framework for brain-computer interface with multiple modalities. All data, tools, and acquisition protocols are openly shared to foster open science in cognitive computing. The explosive growth of artificial intelligence has greatly advanced the field of Brain-computer interfaces (BCI), with massive research efforts to understand brain functions from neural recordings. Boosted by deep learning techniques, booming breakthroughs have been seen in recent years to decode visual and acoustic stimuli in controlled laboratory settings.

Consequently, the compression of scientific data has gained increasing attention.

We also introduce a novel benchmark for evaluating NNPs in molecular property prediction, Hamiltonian prediction, and conformational optimization tasks.

While deep learning models have shown promising results analyzing 3D MRI across a number of brain imaging tasks, most are highly tailored for specific tasks with limited labeled data, and are not able to generalize across tasks and/or populations. The development of self-supervised learning (SSL) has enabled the creation of large medical foundation models that leverage diverse, unlabeled datasets ranging from healthy to diseased data, showing significant success in 2D medical imaging applications. However, even the very few foundation models for 3D brain MRI that have been developed remain limited in resolution, scope, or accessibility. In this work, we present a general, high-resolution SimCLR-based SSL foundation model for 3D brain structural MRI, pre-trained on 18,759 patients (44,958 scans) from 11 publicly available datasets spanning diverse neurological diseases. W e compare our model to Masked Autoencoders (MAE), as well as two supervised baselines, on four diverse downstream prediction tasks in both in-distribution and out-of-distribution settings. Our fine-tuned SimCLR model outperforms all other models across all tasks. Notably, our model still achieves superior performance when fine-tuned using only 20% of labeled training samples for predicting Alzheimer's disease.

Mitotic figure detection is a crucial task in computational pathology, as mitotic activity serves as a strong prognostic marker for tumor aggressiveness. However, domain variability that arises from differences in scanners, tissue types, and staining protocols poses a major challenge to the robustness of automated detection methods. In this study, we introduce SDF-YOLO (Single Detect Focused YOLO), a lightweight yet domain-robust detection framework designed specifically for small, rare targets such as mitotic figures. The model builds on YOLOv11 with task-specific modifications, including a single detection head aligned with mitotic figure scale, coordinate attention to enhance positional sensitivity, and improved cross-channel feature mixing. Experiments were conducted on three datasets that span human and canine tumors: MIDOG ++, canine cutaneous mast cell tumor (CCMCT), and canine mammary carcinoma (CMC). When submitted to the preliminary test set for the MIDOG2025 challenge, SDF-YOLO achieved an average precision (AP) of 0.799, with a precision of 0.758, a recall of 0.775, an F1 score of 0.766, and an FROC-AUC of 5.793, demonstrating both competitive accuracy and computational efficiency. These results indicate that SDF-YOLO provides a reliable and efficient framework for robust mitotic figure detection across diverse domains.