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Schema Matching on Graph: Iterative Graph Exploration for Efficient and Explainable Data Integration

arXiv.org Artificial Intelligence

Schema matching is a critical task in data integration, particularly in the medical domain where disparate Electronic Health Record (EHR) systems must be aligned to standard models like OMOP CDM. While Large Language Models (LLMs) have shown promise in schema matching, they suffer from hallucination and lack of up-to-date domain knowledge. Knowledge Graphs (KGs) offer a solution by providing structured, verifiable knowledge. However, existing KG-augmented LLM approaches often rely on inefficient complex multi-hop queries or storage-intensive vector-based retrieval methods. This paper introduces SMoG (Schema Matching on Graph), a novel framework that leverages iterative execution of simple 1-hop SP ARQL queries, inspired by successful strategies in Knowledge Graph Question Answering (KGQA). SMoG enhances explainability and reliability by generating human-verifiable query paths while significantly reducing storage requirements by directly querying SP ARQL endpoints. Experimental results on real-world medical datasets demonstrate that SMoG achieves performance comparable to state-of-the-art baselines, validating its effectiveness and efficiency in KG-augmented schema matching.


Schemora: schema matching via multi-stage recommendation and metadata enrichment using off-the-shelf llms

arXiv.org Artificial Intelligence

Schema matching is essential for integrating heterogeneous data sources and enhancing dataset discovery, yet it remains a complex and resource-intensive problem. We introduce SCHEMORA, a schema matching framework that combines large language models with hybrid retrieval techniques in a prompt-based approach, enabling efficient identification of candidate matches without relying on labeled training data or exhaustive pairwise comparisons. By enriching schema metadata and leveraging both vector-based and lexical retrieval, SCHEMORA improves matching accuracy and scalability. Evaluated on the MIMIC-OMOP benchmark, it establishes new state-of-the-art performance, with gains of 7.49% in HitRate@5 and 3.75% in HitRate@3 over previous best results. To our knowledge, this is the first LLM-based schema matching method with an open-source implementation, accompanied by analysis that underscores the critical role of retrieval and provides practical guidance on model selection.


Knowledge Graph-based Retrieval-Augmented Generation for Schema Matching

arXiv.org Artificial Intelligence

Traditional similarity-based schema matching methods are incapable of resolving semantic ambiguities and conflicts in domain-specific complex mapping scenarios due to missing commonsense and domain-specific knowledge. The hallucination problem of large language models (LLMs) also makes it challenging for LLM-based schema matching to address the above issues. Therefore, we propose a Knowledge Graph-based Retrieval-Augmented Generation model for Schema Matching, referred to as the KG-RAG4SM. In particular, KG-RAG4SM introduces novel vector-based, graph traversal-based, and query-based graph retrievals, as well as a hybrid approach and ranking schemes that identify the most relevant subgraphs from external large knowledge graphs (KGs). We showcase that KG-based retrieval-augmented LLMs are capable of generating more accurate results for complex matching cases without any re-training. Our experimental results show that KG-RAG4SM outperforms the LLM-based state-of-the-art (SOTA) methods (e.g., Jellyfish-8B) by 35.89% and 30.50% in terms of precision and F1 score on the MIMIC dataset, respectively; KG-RAG4SM with GPT-4o-mini outperforms the pre-trained language model (PLM)-based SOTA methods (e.g., SMAT) by 69.20% and 21.97% in terms of precision and F1 score on the Synthea dataset, respectively. The results also demonstrate that our approach is more efficient in end-to-end schema matching, and scales to retrieve from large KGs. Our case studies on the dataset from the real-world schema matching scenario exhibit that the hallucination problem of LLMs for schema matching is well mitigated by our solution.


Implementing Systemic Thinking for Automatic Schema Matching: An Agent-Based Modeling Approach

arXiv.org Artificial Intelligence

Several approaches are proposed to deal with the problem of the Automatic Schema Matching (ASM). The challenges and difficulties caused by the complexity and uncertainty characterizing both the process and the outcome of Schema Matching motivated us to investigate how bio-inspired emerging paradigm can help with understanding, managing, and ultimately overcoming those challenges. In this paper, we explain how we approached Automatic Schema Matching as a systemic and Complex Adaptive System (CAS) and how we modeled it using the approach of Agent-Based Modeling and Simulation (ABMS). This effort gives birth to a tool (prototype) for schema matching called Reflex-SMAS. A set of experiments demonstrates the viability of our approach on two main aspects: (i) effectiveness (increasing the quality of the found matchings) and (ii) efficiency (reducing the effort required for this efficiency). Our approach represents a significant paradigm-shift, in the field of Automatic Schema Matching.


Magneto: Combining Small and Large Language Models for Schema Matching

arXiv.org Artificial Intelligence

Recent advances in language models opened new opportunities to address complex schema matching tasks. Schema matching approaches have been proposed that demonstrate the usefulness of language models, but they have also uncovered important limitations: Small language models (SLMs) require training data (which can be both expensive and challenging to obtain), and large language models (LLMs) often incur high computational costs and must deal with constraints imposed by context windows. We present Magneto, a cost-effective and accurate solution for schema matching that combines the advantages of SLMs and LLMs to address their limitations. By structuring the schema matching pipeline in two phases, retrieval and reranking, Magneto can use computationally efficient SLM-based strategies to derive candidate matches which can then be reranked by LLMs, thus making it possible to reduce runtime without compromising matching accuracy. We propose a self-supervised approach to fine-tune SLMs which uses LLMs to generate syntactically diverse training data, and prompting strategies that are effective for reranking. We also introduce a new benchmark, developed in collaboration with domain experts, which includes real biomedical datasets and presents new challenges to schema matching methods. Through a detailed experimental evaluation, using both our new and existing benchmarks, we show that Magneto is scalable and attains high accuracy for datasets from different domains.


Matchmaker: Self-Improving Large Language Model Programs for Schema Matching

arXiv.org Artificial Intelligence

Schema matching -- the task of finding matches between attributes across disparate data sources with different tables and hierarchies -- is critical for creating interoperable machine learning (ML)-ready data. Addressing this fundamental data-centric problem has wide implications, especially in domains like healthcare, finance and e-commerce -- but also has the potential to benefit ML models more generally, by increasing the data available for ML model training. However, schema matching is a challenging ML task due to structural/hierarchical and semantic heterogeneity between different schemas. Previous ML approaches to automate schema matching have either required significant labeled data for model training, which is often unrealistic or suffer from poor zero-shot performance. To this end, we propose Matchmaker - a compositional language model program for schema matching, comprised of candidate generation, refinement and confidence scoring. Matchmaker also self-improves in a zero-shot manner without the need for labeled demonstrations via a novel optimization approach, which constructs synthetic in-context demonstrations to guide the language model's reasoning process. Empirically, we demonstrate on real-world medical schema matching benchmarks that Matchmaker outperforms previous ML-based approaches, highlighting its potential to accelerate data integration and interoperability of ML-ready data.


Cost-Aware Uncertainty Reduction in Schema Matching with GPT-4: The Prompt-Matcher Framework

arXiv.org Artificial Intelligence

Schema matching is the process of identifying correspondences between the elements of two given schemata, essential for database management systems, data integration, and data warehousing. The inherent uncertainty of current schema matching algorithms leads to the generation of a set of candidate matches. Storing these results necessitates the use of databases and systems capable of handling probabilistic queries. This complicates the querying process and increases the associated storage costs. Motivated by GPT-4 outstanding performance, we explore its potential to reduce uncertainty. Our proposal is to supplant the role of crowdworkers with GPT-4 for querying the set of candidate matches. To get more precise correspondence verification responses from GPT-4, We have crafted Semantic-match and Abbreviation-match prompt for GPT-4, achieving state-of-the-art results on two benchmark datasets DeepMDatasets 100% (+0.0) and Fabricated-Datasets 91.8% (+2.2) recall rate. To optimise budget utilisation, we have devised a cost-aware solution. Within the constraints of the budget, our solution delivers favourable outcomes with minimal time expenditure. We introduce a novel framework, Prompt-Matcher, to reduce the uncertainty in the process of integration of multiple automatic schema matching algorithms and the selection of complex parameterization. It assists users in diminishing the uncertainty associated with candidate schema match results and in optimally ranking the most promising matches. We formally define the Correspondence Selection Problem, aiming to optimise the revenue within the confines of the GPT-4 budget. We demonstrate that CSP is NP-Hard and propose an approximation algorithm with minimal time expenditure. Ultimately, we demonstrate the efficacy of Prompt-Matcher through rigorous experiments.


Schema Matching with Large Language Models: an Experimental Study

arXiv.org Artificial Intelligence

Large Language Models (LLMs) have shown useful applications in a variety of tasks, including data wrangling. In this paper, we investigate the use of an off-the-shelf LLM for schema matching. Our objective is to identify semantic correspondences between elements of two relational schemas using only names and descriptions. Using a newly created benchmark from the health domain, we propose different so-called task scopes. These are methods for prompting the LLM to do schema matching, which vary in the amount of context information contained in the prompt. Using these task scopes we compare LLM-based schema matching against a string similarity baseline, investigating matching quality, verification effort, decisiveness, and complementarity of the approaches. We find that matching quality suffers from a lack of context information, but also from providing too much context information. In general, using newer LLM versions increases decisiveness. We identify task scopes that have acceptable verification effort and succeed in identifying a significant number of true semantic matches. Our study shows that LLMs have potential in bootstrapping the schema matching process and are able to assist data engineers in speeding up this task solely based on schema element names and descriptions without the need for data instances.


ReMatch: Retrieval Enhanced Schema Matching with LLMs

arXiv.org Artificial Intelligence

Schema matching is a crucial task in data integration, involving the alignment of a source schema with a target schema to establish correspondence between their elements. This task is challenging due to textual and semantic heterogeneity, as well as differences in schema sizes. Although machine-learning-based solutions have been explored in numerous studies, they often suffer from low accuracy, require manual mapping of the schemas for model training, or need access to source schema data which might be unavailable due to privacy concerns. In this paper we present a novel method, named ReMatch, for matching schemas using retrieval-enhanced Large Language Models (LLMs). Our method avoids the need for predefined mapping, any model training, or access to data in the source database. Our experimental results on large real-world schemas demonstrate that ReMatch is an effective matcher. By eliminating the requirement for training data, ReMatch becomes a viable solution for real-world scenarios.


SMUTF: Schema Matching Using Generative Tags and Hybrid Features

arXiv.org Artificial Intelligence

We introduce SMUTF, a unique approach for large-scale tabular data schema matching (SM), which assumes that supervised learning does not affect performance in open-domain tasks, thereby enabling effective cross-domain matching. This system uniquely combines rule-based feature engineering, pre-trained language models, and generative large language models. In an innovative adaptation inspired by the Humanitarian Exchange Language, we deploy 'generative tags' for each data column, enhancing the effectiveness of SM. SMUTF exhibits extensive versatility, working seamlessly with any pre-existing pre-trained embeddings, classification methods, and generative models. Recognizing the lack of extensive, publicly available datasets for SM, we have created and open-sourced the HDXSM dataset from the public humanitarian data. We believe this to be the most exhaustive SM dataset currently available. In evaluations across various public datasets and the novel HDXSM dataset, SMUTF demonstrated exceptional performance, surpassing existing state-of-the-art models in terms of accuracy and efficiency, and} improving the F1 score by 11.84% and the AUC of ROC by 5.08%.