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 qmr-dt network


ABC-Di: Approximate Bayesian Computation for Discrete Data

arXiv.org Machine Learning

Many real-life problems are represented as a black-box, i.e., the internal workings are inaccessible or a closed-form mathematical expression of the likelihood function cannot be defined. For continuous random variables likelihood-free inference problems can be solved by a group of methods under the name of Approximate Bayesian Computation (ABC). However, a similar approach for discrete random variables is yet to be formulated. Here, we aim to fill this research gap. We propose to use a population-based MCMC ABC framework. Further, we present a valid Markov kernel, and propose a new kernel that is inspired by Differential Evolution. We assess the proposed approach on a problem with the known likelihood function, namely, discovering the underlying diseases based on a QMR-DT Network, and three likelihood-free inference problems: (i) the QMR-DT Network with the unknown likelihood function, (ii) learning binary neural network, and (iii) Neural Architecture Search. The obtained results indicate the high potential of the proposed framework and the superiority of the new Markov kernel.


Loopy Belief Propagation for Approximate Inference: An Empirical Study

arXiv.org Artificial Intelligence

Recently, researchers have demonstrated that "loopy belief propagation" - the use of Pearl's polytree algorithm in a Bayesian network with loops - can perform well in the context of error-correcting codes. The most dramatic instance of this is the near Shannon-limit performance of "Turbo Codes" - codes whose decoding algorithm is equivalent to loopy belief propagation in a chain-structured Bayesian network. In this paper we ask: is there something special about the error-correcting code context, or does loopy propagation work as an approximate inference scheme in a more general setting? We compare the marginals computed using loopy propagation to the exact ones in four Bayesian network architectures, including two real-world networks: ALARM and QMR. We find that the loopy beliefs often converge and when they do, they give a good approximation to the correct marginals. However, on the QMR network, the loopy beliefs oscillated and had no obvious relationship to the correct posteriors. We present some initial investigations into the cause of these oscillations, and show that some simple methods of preventing them lead to the wrong results.


Approximate Inference A lgorithms for Two-Layer Bayesian Networks

Neural Information Processing Systems

We present a class of approximate inference algorithms for graphical models of the QMR-DT type. We give convergence rates for these algorithms and for the Jaakkola and Jordan (1999) algorithm, and verify these theoretical predictions empirically.


Approximate Inference A lgorithms for Two-Layer Bayesian Networks

Neural Information Processing Systems

We present a class of approximate inference algorithms for graphical models of the QMR-DT type. We give convergence rates for these algorithms and for the Jaakkola and Jordan (1999) algorithm, and verify these theoretical predictions empirically.


Approximate Inference A lgorithms for Two-Layer Bayesian Networks

Neural Information Processing Systems

We present a class of approximate inference algorithms for graphical models of the QMR-DT type. We give convergence rates for these algorithms andfor the Jaakkola and Jordan (1999) algorithm, and verify these theoretical predictions empirically.


Variational Probabilistic Inference and the QMR-DT Network

Journal of Artificial Intelligence Research

We describe a variational approximation method for efficient inference in large-scale probabilistic models. Variational methods are deterministic procedures that provide approximations to marginal and conditional probabilities of interest. They provide alternatives to approximate inference methods based on stochastic sampling or search. We describe a variational approach to the problem of diagnostic inference in the `Quick Medical Reference' (QMR) network. The QMR network is a large-scale probabilistic graphical model built on statistical and expert knowledge. Exact probabilistic inference is infeasible in this model for all but a small set of cases. We evaluate our variational inference algorithm on a large set of diagnostic test cases, comparing the algorithm to a state-of-the-art stochastic sampling method.