predictive variable
De-Biasing Models of Biased Decisions: A Comparison of Methods Using Mortgage Application Data
Prediction models can improve efficiency by automating decisions such as the approval of loan applications. However, they may inherit bias against protected groups from the data they are trained on. This paper adds counterfactual (simulated) ethnic bias to real data on mortgage application decisions, and shows that this bias is replicated by a machine learning model (XGBoost) even when ethnicity is not used as a predictive variable. Next, several other de-biasing methods are compared: averaging over prohibited variables, taking the most favorable prediction over prohibited variables (a novel method), and jointly minimizing errors as well as the association between predictions and prohibited variables. De-biasing can recover some of the original decisions, but the results are sensitive to whether the bias is effected through a proxy.
Evolutionary Causal Discovery with Relative Impact Stratification for Interpretable Data Analysis
Deng, Ou, Nishimura, Shoji, Ogihara, Atsushi, Jin, Qun
This study proposes Evolutionary Causal Discovery (ECD) for causal discovery that tailors response variables, predictor variables, and corresponding operators to research datasets. Utilizing genetic programming for variable relationship parsing, the method proceeds with the Relative Impact Stratification (RIS) algorithm to assess the relative impact of predictor variables on the response variable, facilitating expression simplification and enhancing the interpretability of variable relationships. ECD proposes an expression tree to visualize the RIS results, offering a differentiated depiction of unknown causal relationships compared to conventional causal discovery. The ECD method represents an evolution and augmentation of existing causal discovery methods, providing an interpretable approach for analyzing variable relationships in complex systems, particularly in healthcare settings with Electronic Health Record (EHR) data. Experiments on both synthetic and real-world EHR datasets demonstrate the efficacy of ECD in uncovering patterns and mechanisms among variables, maintaining high accuracy and stability across different noise levels. On the real-world EHR dataset, ECD reveals the intricate relationships between the response variable and other predictive variables, aligning with the results of structural equation modeling and shapley additive explanations analyses.
Subgroup analysis methods for time-to-event outcomes in heterogeneous randomized controlled trials
Perrin, Valentine, Noiry, Nathan, Loiseau, Nicolas, Nowak, Alex
Non-significant randomized control trials can hide subgroups of good responders to experimental drugs, thus hindering subsequent development. Identifying such heterogeneous treatment effects is key for precision medicine and many post-hoc analysis methods have been developed for that purpose. While several benchmarks have been carried out to identify the strengths and weaknesses of these methods, notably for binary and continuous endpoints, similar systematic empirical evaluation of subgroup analysis for time-to-event endpoints are lacking. This work aims to fill this gap by evaluating several subgroup analysis algorithms in the context of time-to-event outcomes, by means of three different research questions: Is there heterogeneity? What are the biomarkers responsible for such heterogeneity? Who are the good responders to treatment? In this context, we propose a new synthetic and semi-synthetic data generation process that allows one to explore a wide range of heterogeneity scenarios with precise control on the level of heterogeneity. We provide an open source Python package, available on Github, containing our generation process and our comprehensive benchmark framework. We hope this package will be useful to the research community for future investigations of heterogeneity of treatment effects and subgroup analysis methods benchmarking.
Analysis, Characterization, Prediction and Attribution of Extreme Atmospheric Events with Machine Learning: a Review
Salcedo-Sanz, Sancho, Pรฉrez-Aracil, Jorge, Ascenso, Guido, Del Ser, Javier, Casillas-Pรฉrez, David, Kadow, Christopher, Fister, Dusan, Barriopedro, David, Garcรญa-Herrera, Ricardo, Restelli, Marcello, Giuliani, Mateo, Castelletti, Andrea
Atmospheric Extreme Events (EEs) cause severe damages to human societies and ecosystems. The frequency and intensity of EEs and other associated events are increasing in the current climate change and global warming risk. The accurate prediction, characterization, and attribution of atmospheric EEs is therefore a key research field, in which many groups are currently working by applying different methodologies and computational tools. Machine Learning (ML) methods have arisen in the last years as powerful techniques to tackle many of the problems related to atmospheric EEs. This paper reviews the ML algorithms applied to the analysis, characterization, prediction, and attribution of the most important atmospheric EEs. A summary of the most used ML techniques in this area, and a comprehensive critical review of literature related to ML in EEs, are provided. A number of examples is discussed and perspectives and outlooks on the field are drawn.
A Random Interaction Forest for Prioritizing Predictive Biomarkers
Zeng, Zhen, Lu, Yuefeng, Shen, Judong, Zheng, Wei, Shaw, Peter, Dorr, Mary Beth
Precision medicine is becoming a focus in medical research recently, as its implementation brings values to all stakeholders in the healthcare system. Various statistical methodologies have been developed tackling problems in different aspects of this field, e.g., assessing treatment heterogeneity, identifying patient subgroups, or building treatment decision models. However, there is a lack of new tools devoted to selecting and prioritizing predictive biomarkers. We propose a novel tree-based ensemble method, random interaction forest (RIF), to generate predictive importance scores and prioritize candidate biomarkers for constructing refined treatment decision models. RIF was evaluated by comparing with the conventional random forest and univariable regression methods and showed favorable properties under various simulation scenarios. We applied the proposed RIF method to a biomarker dataset from two phase III clinical trials of bezlotoxumab on $\textit{Clostridium difficile}$ infection recurrence and obtained biologically meaningful results.
New Hybrid Neuro-Evolutionary Algorithms for Renewable Energy and Facilities Management Problems
This Ph.D. thesis deals with the optimization of several renewable energy resources development as well as the improvement of facilities management in oceanic engineering and airports, using computational hybrid methods belonging to AI to this end. Energy is essential to our society in order to ensure a good quality of life. This means that predictions over the characteristics on which renewable energies depend are necessary, in order to know the amount of energy that will be obtained at any time. The second topic tackled in this thesis is related to the basic parameters that influence in different marine activities and airports, whose knowledge is necessary to develop a proper facilities management in these environments. Within this work, a study of the state-of-the-art Machine Learning have been performed to solve the problems associated with the topics above-mentioned, and several contributions have been proposed: One of the pillars of this work is focused on the estimation of the most important parameters in the exploitation of renewable resources. The second contribution of this thesis is related to feature selection problems. The proposed methodologies are applied to multiple problems: the prediction of $H_s$, relevant for marine energy applications and marine activities, the estimation of WPREs, undesirable variations in the electric power produced by a wind farm, the prediction of global solar radiation in areas from Spain and Australia, really important in terms of solar energy, and the prediction of low-visibility events at airports. All of these practical issues are developed with the consequent previous data analysis, normally, in terms of meteorological variables.