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Harnessing Feature Resonance under Arbitrary Target Alignment for Out-of-Distribution Node Detection

Neural Information Processing Systems

Out-of-distribution (OOD) node detection in graphs is a critical yet challenging task. Most existing approaches rely heavily on fine-grained labeled data to obtain a pretrained supervised classifier, inherently assuming the existence of a well-defined pretext classification task. However, when such a task is ill-defined or absent, their applicability becomes severely limited. To overcome this limitation, there is an urgent need to propose a more scalable OOD detection method that is independent of both pretext tasks and label supervision. We harness a new phenomenon called Feature Resonance, focusing on the feature space rather than the label space. We observe that, ideally, during the optimization of known ID samples, unknown ID samples undergo more significant representation changes than OOD samples, even when the model is trained to align arbitrary targets. The rationale behind it is that even without gold labels, the local manifold may still exhibit smooth resonance. Based on this, we further develop a novel graph OOD framework, dubbed Resonance-based Separation and Learning (RSL), which comprises two core modules: (i)-a more practical micro-level proxy of feature resonance that measures the movement of feature vectors in one training step.


Rethinking Tokenized Graph Transformers for Node Classification

Neural Information Processing Systems

Node tokenized graph Transformers (GTs) have shown promising performance in node classification. The generation of token sequences is the key module in existing tokenized GTs which transforms the input graph into token sequences, facilitating the node representation learning via Transformer. In this paper, we observe that the generations of token sequences in existing GTs only focus on the first-order neighbors on the constructed similarity graphs, which leads to the limited usage of nodes to generate diverse token sequences, further restricting the potential of tokenized GTs for node classification. To this end, we propose a new method termed SwapGT. SwapGT first introduces a novel token swapping operation based on the characteristics of token sequences that fully leverages the semantic relevance of nodes to generate more informative token sequences. Then, SwapGT leverages a Transformer-based backbone to learn node representations from the generated token sequences. Moreover, SwapGT develops a center alignment loss to constrain the representation learning from multiple token sequences, further enhancing the model performance.


MultiNet: Adaptive Multi-Viewed Subgraph Convolutional Networks for Graph Classification

Neural Information Processing Systems

The problem of over-smoothing has emerged as a fundamental issue for Graph Convolutional Networks (GCNs). While existing efforts primarily focus on enhancing the discriminability of node representations for node classification, they tend to overlook the over-smoothing at the graph level, significantly influencing the performance of graph classification. In this paper, we provide an explanation of the graph-level over-smoothing phenomenon and propose a novel Adaptive MultiViewed Subgraph Convolutional Network (MultiNet) to address this challenge. Specifically, the MultiNet introduces a local subgraph convolution module that adaptively divides each input graph into multiple subgraph views. Then a number of subgraph-based view-specific convolution operations are applied to constrain the extent of node information propagation over the original global graph structure, not only mitigating the over-smoothing issue but also generating more discriminative local node representations. Moreover, we develop an alignment-based readout that establishes correspondences between nodes over different graphs, thereby effectively preserving the local node-level structure information and improving the discriminative ability of the resulting graph-level representations. Theoretical analysis and empirical studies show that the MultiNet mitigates the graph-level over-smoothing and achieves excellent performance for graph classification.


Rethinking Tokenized Graph Transformers for Node Classification

Neural Information Processing Systems

Node tokenized graph Transformers (GTs) have shown promising performance in node classification. The generation of token sequences is the key module in existing tokenized GTs which transforms the input graph into token sequences, facilitating the node representation learning via Transformer. In this paper, we observe that the generations of token sequences in existing GTs only focus on the first-order neighbors on the constructed similarity graphs, which leads to the limited usage of nodes to generate diverse token sequences, further restricting the potential of tokenized GTs for node classification. To this end, we propose a new method termed SwapGT. SwapGT first introduces a novel token swapping operation based on the characteristics of token sequences that fully leverages the semantic relevance of nodes to generate more informative token sequences. Then, SwapGT leverages a Transformer-based backbone to learn node representations from the generated token sequences. Moreover, SwapGT develops a center alignment loss to constrain the representation learning from multiple token sequences, further enhancing the model performance.


Unsupervised Graph Neural Architecture Search with Disentangled Self-supervision (Appendix)

Neural Information Processing Systems

B.1 Complexity Analysis Denote the number of nodes and edges in the graph as N and E, the number of latent factors as K, the number of operation choices as |O|, the dimensionality of hidden representations as d. The time complexity of the disentangled super-network is O(K|E|d+K|V|d2), where the computation for each factor is fully parallelizable and amenable to GPU acceleration, and K is usually a small constant. The time complexity of the self-supervised training and contrastive search modules is both O(K2d2). As architectures under different factors share the parameters, the number of learnable parameters is the same as classical graph super-network, i.e., O(|O|d2). Therefore, the complexity of our method is comparable to classical GNAS methods.


Demystifying Oversmoothing in Attention-Based Graph Neural Networks

Neural Information Processing Systems

Oversmoothing in Graph Neural Networks (GNNs) refers to the phenomenon where increasing network depth leads to homogeneous node representations. While previous work has established that Graph Convolutional Networks (GCNs) exponentially lose expressive power, it remains controversial whether the graph attention mechanism can mitigate oversmoothing. In this work, we provide a definitive answer to this question through a rigorous mathematical analysis, by viewing attention-based GNNs as nonlinear time-varying dynamical systems and incorporating tools and techniques from the theory of products of inhomogeneous matrices and the joint spectral radius. We establish that, contrary to popular belief, the graph attention mechanism cannot prevent oversmoothing and loses expressive power exponentially. The proposed framework extends the existing results on oversmoothing for symmetric GCNs to a significantly broader class of GNN models, including random walk GCNs, Graph Attention Networks (GATs) and (graph) transformers.




High-Order Pooling for Graph Neural Networks with Tensor Decomposition

Neural Information Processing Systems

Graph Neural Networks (GNNs) are attracting growing attention due to their effectiveness and flexibility in modeling a variety of graph-structured data. Exiting GNN architectures usually adopt simple pooling operations (e.g., sum, average, max) when aggregating messages from a local neighborhood for updating node representation or pooling node representations from the entire graph to compute the graph representation. Though simple and effective, these linear operations do not model high-order non-linear interactions among nodes. We propose the Tensorized Graph Neural Network (tGNN), a highly expressive GNN architecture relying on tensor decomposition to model high-order non-linear node interactions.


CARE: Modeling Interacting Dynamics Under Temporal Environmental Variation

Neural Information Processing Systems

Modeling interacting dynamical systems, such as fluid dynamics and intermolecular interactions, is a fundamental research problem for understanding and simulating complex real-world systems. Many of these systems can be naturally represented by dynamic graphs, and graph neural network-based approaches have been proposed and shown promising performance. However, most of these approaches assume the underlying dynamics does not change over time, which is unfortunately untrue. For example, a molecular dynamics can be affected by the environment temperature over the time. In this paper, we take an attempt to provide a probabilistic view for time-varying dynamics and propose a model Context-attended Graph ODE (CARE) for modeling time-varying interacting dynamical systems. In our CARE, we explicitly use a context variable to model time-varying environment and construct an encoder to initialize the context variable from historical trajectories. Furthermore, we employ a neural ODE model to depict the dynamic evolution of the context variable inferred from system states. This context variable is incorporated into a coupled ODE to simultaneously drive the evolution of systems. Comprehensive experiments on four datasets demonstrate the effectiveness of our proposed CARE compared with several state-of-the-art approaches.