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 near-infrared spectroscopy


NeuroCLIP: A Multimodal Contrastive Learning Method for rTMS-treated Methamphetamine Addiction Analysis

Wang, Chengkai, Wu, Di, Liao, Yunsheng, Zheng, Wenyao, Zeng, Ziyi, Gao, Xurong, Wu, Hemmings, Zhu, Zhoule, Yang, Jie, Zhong, Lihua, Cheng, Weiwei, Chen, Yun-Hsuan, Sawan, Mohamad

arXiv.org Artificial Intelligence

-- Methamphetamine dependence poses a significant global health challenge, yet its assessment and the evaluation of treatments like repetitive transcranial magnetic stimulation (rTMS) frequently depend on subjective self-reports, which may introduce uncertainties. While objective neuroimaging modalities such as electroen-cephalography (EEG) and functional near-infrared spectroscopy (fNIRS) offer alternatives, their individual limitations and the reliance on conventional, often hand-crafted, feature extraction can compromise the reliability of derived biomarkers. To overcome these limitations, we propose NeuroCLIP, a novel deep learning framework integrating simultaneously recorded EEG and fNIRS data through a progressive learning strategy. This approach offers a robust and trustworthy biomarker for methamphetamine addiction. Validation experiments show that NeuroCLIP significantly improves discriminative capabilities among the methamphetamine-dependent individuals and healthy controls compared to models using either EEG or only fNIRS alone. Furthermore, the proposed framework facilitates objective, brain-based evaluation of rTMS treatment efficacy, demonstrating measurable shifts in neural patterns towards healthy control profiles after treatment. Critically, we establish the trustworthiness of the multimodal data-driven biomarker by showing its strong correlation with psychometrically validated craving scores. These findings suggest that biomarker derived from EEG-fNIRS data via NeuroCLIP offers enhanced robustness and reliability over single-modality approaches, providing a valuable tool for addiction neuroscience research and potentially improving clinical assessments. Ziyi Zeng is also with the School of Data Science, Xiamen University Malaysia, Selangor 43900, Malaysia. Hemmings Wu and Zhoule Zhu are with Department of Neurosurgery, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310009, China. Lihua Zhong is with the Department of Education and Correction, Zhejiang Gongchen Compulsory Isolated Detoxification Center, Hangzhou 310011, China. Weiwei Cheng is with Zhejiang Liangzhu Compulsory Isolated Detoxification Center, Hangzhou 311115, China. ETHAMPHET AMINE addiction represents a significant and growing public health concern globally.


A Fuzzy-based Approach to Predict Human Interaction by Functional Near-Infrared Spectroscopy

Jiang, Xiaowei, Ou, Liang, Chen, Yanan, Ao, Na, Chang, Yu-Cheng, Do, Thomas, Lin, Chin-Teng

arXiv.org Artificial Intelligence

The paper introduces a Fuzzy-based Attention (Fuzzy Attention Layer) mechanism, a novel computational approach to enhance the interpretability and efficacy of neural models in psychological research. The proposed Fuzzy Attention Layer mechanism is integrated as a neural network layer within the Transformer Encoder model to facilitate the analysis of complex psychological phenomena through neural signals, such as those captured by functional Near-Infrared Spectroscopy (fNIRS). By leveraging fuzzy logic, the Fuzzy Attention Layer is capable of learning and identifying interpretable patterns of neural activity. This capability addresses a significant challenge when using Transformer: the lack of transparency in determining which specific brain activities most contribute to particular predictions. Our experimental results demonstrated on fNIRS data from subjects engaged in social interactions involving handholding reveal that the Fuzzy Attention Layer not only learns interpretable patterns of neural activity but also enhances model performance. Additionally, the learned patterns provide deeper insights into the neural correlates of interpersonal touch and emotional exchange. The application of our model shows promising potential in deciphering the subtle complexities of human social behaviors, thereby contributing significantly to the fields of social neuroscience and psychological AI.


Calibration of Deep Learning Classification Models in fNIRS

Cao, Zhihao, Luo, Zizhou

arXiv.org Artificial Intelligence

Functional near-infrared spectroscopy (fNIRS) is a valuable non-invasive tool for monitoring brain activity. The classification of fNIRS data in relation to conscious activity holds significance for advancing our understanding of the brain and facilitating the development of brain-computer interfaces (BCI). Many researchers have turned to deep learning to tackle the classification challenges inherent in fNIRS data due to its strong generalization and robustness. In the application of fNIRS, reliability is really important, and one mathematical formulation of the reliability of confidence is calibration. However, many researchers overlook the important issue of calibration. To address this gap, we propose integrating calibration into fNIRS field and assess the reliability of existing models. Surprisingly, our results indicate poor calibration performance in many proposed models. To advance calibration development in the fNIRS field, we summarize three practical tips. Through this letter, we hope to emphasize the critical role of calibration in fNIRS research and argue for enhancing the reliability of deep learning-based predictions in fNIRS classification tasks. All data from our experimental process are openly available on GitHub.


Applications of Machine Learning in Biopharmaceutical Process Development and Manufacturing: Current Trends, Challenges, and Opportunities

Khuat, Thanh Tung, Bassett, Robert, Otte, Ellen, Grevis-James, Alistair, Gabrys, Bogdan

arXiv.org Artificial Intelligence

While machine learning (ML) has made significant contributions to the biopharmaceutical field, its applications are still in the early stages in terms of providing direct support for quality-by-design based development and manufacturing of biopharmaceuticals, hindering the enormous potential for bioprocesses automation from their development to manufacturing. However, the adoption of ML-based models instead of conventional multivariate data analysis methods is significantly increasing due to the accumulation of large-scale production data. This trend is primarily driven by the real-time monitoring of process variables and quality attributes of biopharmaceutical products through the implementation of advanced process analytical technologies. Given the complexity and multidimensionality of a bioproduct design, bioprocess development, and product manufacturing data, ML-based approaches are increasingly being employed to achieve accurate, flexible, and high-performing predictive models to address the problems of analytics, monitoring, and control within the biopharma field. This paper aims to provide a comprehensive review of the current applications of ML solutions in a bioproduct design, monitoring, control, and optimisation of upstream, downstream, and product formulation processes. Finally, this paper thoroughly discusses the main challenges related to the bioprocesses themselves, process data, and the use of machine learning models in biopharmaceutical process development and manufacturing. Moreover, it offers further insights into the adoption of innovative machine learning methods and novel trends in the development of new digital biopharma solutions.


Spectroscopy and Chemometrics/Machine-Learning News Weekly #9, 2023 – [:en]NIR Calibration Model[:de]NIR Calibration Model[:it]Modelli di Calibrazione NIR

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Get the Spectroscopy and Chemometrics News Weekly in real time on Twitter @ CalibModel and follow us. "Near infrared spectroscopy for estimating properties of kraft paper reinforced with cellulose nanofibrils" LINK "Visible and near-infrared spectroscopy and deep learning application for the qualitative and quantitative investigation of nitrogen status in cotton leaves" LINK "Effect of solution supersaturation on crystal formation of Vitamin K2 based on near infrared spectroscopy analysis technology" LINK "Releasing fast and slow: Non-destructive prediction of density and drug release from SLS 3D printed tablets using NIR spectroscopy" LINK "Rapid Determination of Phosphogypsum in Soil Based by Infrared (IR) and Near-Infrared (NIR) Spectroscopy with Multivariate Calibration" LINK "Quantitative and convenient protocol for analysis of surface‐modified silica nanoparticles using 29Si‐NMR and near‐infrared diffuse reflection spectroscopy" LINK "The Predicted Model of the Sensory Quality of Refrigerated Tilapia Skin Established Based on Characteristic Near-Infrared Spectrum" LINK "Remote Sensing: A Method for Retrieving Cloud-Top Height Based on a Machine Learning Model Using the Himawari-8 Combined with Near Infrared Data" LINK "Oxyhaemoglobin Level Measured Using Near-Infrared Spectrometer Is Associated with Brain Mitochondrial Dysfunction After Cardiac Arrest in Rats" LINK


Spectroscopy and Chemometrics/Machine-Learning News Weekly #6, 2023 – [:en]NIR Calibration Model[:de]NIR Calibration Model[:it]Modelli di Calibrazione NIR

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Get the Spectroscopy and Chemometrics News Weekly in real time on Twitter @ CalibModel and follow us. "Component Prediction of Antai Pills Based on One-Dimensional Convolutional Neural Network and Near-Infrared Spectroscopy" LINK "Moisture content monitoring in withering leaves during black tea processing based on electronic eye and near infrared spectroscopy" LINK "Hyperspectral technique combined with stacking and blending ensemble learning method for detection of cadmium content in oilseed rape leaves" LINK "Capacitance spectroscopy enables realtime monitoring of early cell death in mammalian cell culture" LINK "Detection of bruised loquats based on reflectance, absorbance and Kubelka-Munk spectra" LINK "Longitudinal alterations of pulmonary [… formula…] O2 on-kinetics during moderate-intensity exercise in competitive youth cyclists are related to alterations in the …" LINK


Spectroscopy and Chemometrics/Machine-Learning News Weekly #5, 2023 – [:en]NIR Calibration Model[:de]NIR Calibration Model[:it]Modelli di Calibrazione NIR

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Using NIR Spectroscopy and don't want to pay for a calibration abo or a subscription based software/service? If you would like Pay per calibration, then CalibrationModel is the solution for you. "Near infrared spectroscopy for blend uniformity monitoring: An innovative qualitative application based on the coefficient of determination" LINK "Research on the secondary structure and hydration water around human serum albumin induced by ethanol with infrared and near-infrared spectroscopy" LINK "Point-of-Care Using Vis-NIR Spectroscopy for White Blood Cell Count Analysis" LINK "Rapid determination of viscosity and viscosity index of lube base oil based on near-infrared spectroscopy and new transformation formula" LINK "A recognition method of mushroom mycelium varieties based on near-infrared spectroscopy and deep learning model" LINK "Fast and nondestructive discrimination of fresh tea leaves at different altitudes based on near infrared spectroscopy and various chemometrics methods" LINK "Detection of early collision and compression bruises for pears based on hyperspectral imaging technology" LINK "Hyperspectral Imaging based Detection of PVC during Sellafield Repackaging Procedures" LINK "Study on the detection of apple soluble solids based on fractal theory and hyperspectral imaging technology" LINK "Ganoderma boninense classification based on near-infrared spectral data using machine learning techniques" LINK "Sensors: Prediction of the Nitrogen Content of Rice Leaf Using Multi-Spectral Images Based on Hybrid Radial Basis Function Neural Network and Partial Least-Squares Regression" LINK "Foods: Detection of the Inoculated Fermentation Process of Apo Pickle Based on a Colorimetric Sensor Array Method" LINK "Analysis of physio-chemical properties of solution grown third order nonlinear optical single crystal: 1, 4-oxazinanium nitrate for photonic applications" LINK "A novel composite colorimetric sensor array for quality characterization of shrimp paste based on indicator displacement assay and etching of silver nanoprisms" LINK "Research on weed identification method in rice fields based on UAV remote sensing" LINK "Flexible Microspectrometers Based on Printed Perovskite Pixels with Graded Bandgaps" spectrometers miniaturization LINK "Improving spectral estimation of soil inorganic carbon in urban and suburban areas by coupling continuous wavelet transform with geographical stratification" LINK "Biomedicines: Fourier Transform Infrared Spectroscopy Reveals Molecular Changes in Blood Vessels of Rats Treated with Pentadecapeptide BPC 157" LINK "Electrochromic Tungsten Oxide Nanofilms and Ionic Liquid Based Ion Conductor for Smart Windows Development: Preparation, Characterization and …" LINK


Spectroscopy and Chemometrics/Machine-Learning News Weekly #4, 2023 – [:en]NIR Calibration Model[:de]NIR Calibration Model[:it]Modelli di Calibrazione NIR

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"Multiple adulterants detection in turmeric powder using VIS-SWNIR hyperspectral imaging followed by multivariate curve resolution and classification techniques" LINK "Application of visible-near-infrared hyperspectral imaging technology coupled with wavelength selection algorithm for rapid determination of moisture content of …" LINK


Spectroscopy and Chemometrics Machine-Learning News Weekly #3, 2023 – [:en]NIR Calibration Model[:de]NIR Calibration Model[:it]Modelli di Calibrazione NIR

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Get the Spectroscopy and Chemometrics News Weekly in real time on Twitter @ CalibModel and follow us. "Rapid prediction of Yongchuan Xiuya tea quality by using near infrared spectroscopy coupled with chemometric methods" LINK "An improved method for predicting soluble solids content in apples by heterogeneous transfer learning and near-infrared spectroscopy" LINK "Research on construction method and validity mechanism of robust analysis model in snow peach quality detection based on visible-near infrared spectroscopy" LINK "Identification of milk powder brands by visible-near infrared spectroscopy based on principal component analysis and neural networks" LINK "Near Infrared Spectroscopy coupled to Chemometrics for the authentication of donkey milk" LINK "Applied Sciences: Construction and Application of Detection Model for Leucine and Tyrosine Content in Golden Tartary Buckwheat Based on Near Infrared Spectroscopy" LINK "Fast and robust NIRS-based characterization of raw organic waste: using non-linear methods to handle water effects" LINK "Hazelnut quality detection based on deep learning and near-infrared spectroscopy" LINK "Soil Nitrogen Content Detection Based on Near-Infrared Spectroscopy" LINK "Rapid nondestructive detecting of sorghum varieties based on hyperspectral imaging and convolutional neural network" LINK "Detection of Water Content in Lettuce Canopies Based on Hyperspectral Imaging Technology under Outdoor Conditions" LINK "Near-Infrared Spectroscopy Coupled with Chemometrics and Artificial Neural Network Modeling for Prediction of Emulsion Droplet Diameters" LINK "How can cry acoustics associate newborns' distress levels with neurophysiological and behavioral signals?" "How can cry acoustics associate newborns' distress levels with neurophysiological and behavioral signals?" "Agriculture: The Application of Machine Learning Models Based on Leaf Spectral Reflectance for Estimating the Nitrogen Nutrient Index in Maize" LINK "Foods: A Method for Capture and Detection of Crop Airborne Disease Spores Based on Microfluidic Chips and Micro Raman Spectroscopy" LINK "Plants: Pattern Recognition of Varieties of Peach Fruit and Pulp from Their Volatile Components and Metabolic Profile Using HS-SPME-GC/MS Combined with Multivariable Statistical Analysis" LINK "Compositional analysis in sorghum (Sorghum bicolor) NIR spectral techniques based on mean spectra from single seeds" LINK "Nondestructive Techniques for Fresh Produce Quality Analysis: An Overview" LINK "Application of Spectroscopy for Assessing Quality and Safety of Fresh Horticultural Produce" LINK


Spectroscopy and Chemometrics Machine-Learning News Weekly #1, 2023 – [:en]NIR Calibration Model[:de]NIR Calibration Model[:it]Modelli di Calibrazione NIR

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Get the Spectroscopy and Chemometrics News Weekly in real time on Twitter @ CalibModel and follow us. "Foods: Prediction Models for the Content of Calcium, Boron and Potassium in the Fruit of'Huangguan' Pears Established by Using Near-Infrared Spectroscopy" LINK "Construction and Application of Detection Model for Leucine and Tyrosine Content in Golden Tartary Buckwheat Based on Near Infrared Spectroscopy" LINK "Rapid recognition of different sources of methamphetamine drugs based on hand-held near infrared spectroscopy and multi-layer-extreme learning machine algorithms" LINK "Rapid determination of viscosity and viscosity index of lube base oil based on near-infrared spectroscopy and new transformation formula" LINK "Simple dilated convolutional neural network for quantitative modeling based on near infrared spectroscopy techniques" LINK "Fast and nondestructive discrimination of fresh tea leaves at different altitudes based on near infrared spectroscopy and various chemometrics methods" LINK "NIR spectroscopy combined with 1D-convolutional neural network for breast cancerization analysis and diagnosis" LINK "Associations between visceral adipose tissue estimates produced by near-infrared spectroscopy, mobile anthropometrics, and traditional body composition …" LINK "Discrimination of Minced Mutton Adulteration Based on Sized-Adaptive Online NIRS Information and 2D Conventional Neural Network. "Fruit detection research based on near-infrared spectroscopy and lightweight neural network" LINK "Honey quality detection based on near-infrared spectroscopy" LINK "Evaluation of the potential of near infrared hyperspectral imaging for monitoring the invasive brown marmorated stink bug" LINK "Denoising stacked autoencodersbased nearinfrared quality monitoring method via robust samples evaluation" LINK "Visualization research of egg freshness based on hyperspectral imaging and binary competitive adaptive reweighted sampling" LINK "Desert Soil Salinity Inversion Models Based on Field In Situ Spectroscopy in Southern Xinjiang, China" LINK "Novel broad spectral response perovskite solar cells: A review of the current status and advanced strategies for breaking the theoretical limit efficiency" LINK "Remote Sensing: Estimation of Potato Above-Ground Biomass Based on Vegetation Indices and Green-Edge Parameters Obtained from UAVs" LINK "Prognostic value of syntax score, intravascular ultrasound and near-infrared spectroscopy to identify low-risk patients with coronary artery disease 5-year …" LINK