fourier transform
Bridging Equivariant GNNs and Spherical CNNs for Structured Physical Domains
Many modeling tasks from disparate domains can be framed in the same way, computing spherical signals from geometric inputs, for example, computing the radar response of different objects or navigating through an environment. This paper introduces G2Sphere, a general method for mapping object geometries to spherical signals. G2Sphere operates entirely in Fourier space, encoding geometric structure into latent Fourier features using equivariant neural networks and outputting the Fourier coefficients of the continuous target signal, which can be evaluated at any resolution. By utilizing a hybrid GNN-spherical CNN architecture, our method achieves a much higher frequency output signal than comparable equivariant GNNs and avoids hand-engineered geometry features used previously by purely spherical methods. We perform experiments on various challenging domains, including radar response modeling, aerodynamic drag prediction, and policy learning for manipulation and navigation. We find that G2Sphere outperforms competitive baselines in terms of accuracy and inference time, and we demonstrate that equivariance and Fourier features lead to improved sample efficiency and generalization.
SHAP zero Explains Biological Sequence Models with Near-zero Marginal Cost for Future Queries
The growing adoption of machine learning models for biological sequences has intensified the need for interpretable predictions, with Shapley values emerging as a theoretically grounded standard for model explanation. While effective for local explanations of individual input sequences, scaling Shapley-based interpretability to extract global biological insights requires evaluating thousands of sequences--incurring exponential computational cost per query. We introduce SHAP zero, a novel algorithm that amortizes the cost of Shapley value computation across large-scale biological datasets. After a one-time model sketching step, SHAP zero enables near-zero marginal cost for future queries by uncovering an underexplored connection between Shapley values, high-order feature interactions, and the sparse Fourier transform of the model. Applied to models of guide RNA efficacy, DNA repair outcomes, and protein fitness, SHAP zero explains predictions orders of magnitude faster than existing methods, recovering rich combinatorial interactions previously inaccessible at scale. This work opens the door to principled, efficient, and scalable interpretability for black-box sequence models in biology.
SHAP values via sparse Fourier representation
SHAP (SHapley Additive exPlanations) values are a widely used method for local feature attribution in interpretable and explainable AI. We propose an efficient two-stage algorithm for computing SHAP values in both black-box setting and tree-based models. We assume the black-box predictor or tree model accepts binary (zero-one) features.
Efficient k-Sparse Band-Limited Interpolation with Improved Approximation Ratio
We consider the task of interpolating a k-sparse band-limited signal from a small collection of noisy time-domain samples. Exploiting a new analytic framework for hierarchical frequency decomposition that performs systematic noise cancellation, we give the first polynomial-time algorithm with a provable (3+ 2+ฮต)approximation guarantee for continuous interpolation. Our method breaks the long-standing C > 100 barrier set by the best previous algorithms, sharply reducing the gap to optimal recovery and establishing a new state of the art for high-accuracy band-limited interpolation. We also give a refined "shrinking-range" variant that achieves a ( 2+ฮต+c)-approximation on any sub-interval (1 c)T for some c (0,1), which gives even higher interpolation accuracy.
Physen-Noise2Noise: Physics-Guided Self-Supervised Defocus Deblurring with Bias Correction under Low-Light Conditions
Huang, Ziyan, Wu, Lang, Wang, Hongji, Liu, Yifei, Tang, Dongliang, Wang, Hongqiao
Low-light, long-exposure defocus deblurring remains a challenging problem due to the simultaneous presence of severe blur and complex biased noise. Existing methods typically rely on simplified noise assumptions, which limits their effectiveness under realistic imaging conditions. In this work, we propose Physen-Noise2Noise, a self-supervised deblurring framework guided by the physical model of defocus imaging, which leverages noisy multi-frame observations without requiring clean reference images. Unlike conventional Noise2Noise-based approaches that assume zero-mean noise, we derive a frequency-domain constraint inherent to the defocus imaging process and incorporate it into the learning framework via a learnable noise bias parameter. In addition, a multi-frame noisy initialization strategy is introduced to suppress complex biased noise prior to deblurring, providing a more stable starting point for reconstruction. This formulation explicitly models biased noise and enables joint bias correction and high-frequency detail recovery during training. Furthermore, we develop a pretrain-finetune variant to enhance robustness and generalization under challenging noise conditions. Extensive experiments on both simulation and real-world datasets demonstrate that the proposed method consistently outperforms state-of-the-art self-supervised approaches for defocus deblurring in the presence of complex biased noise.
Learning Functional Transduction: S.I. Contents
We propose below the proofs of the results presented in the main text. Most of the arguments are adapted from the development proposed in (Zhang, 2013) which goes beyond real or complex-valued RKBS developed in (Zhang et al., 2009; Song et al., 2013) to develop the notion of vector-valued RKBS. In addition, we note that assumptions regarding the properties of the RKBS of interests such as uniform Frรฉchet differentiability and uniform convexity have been further relaxed in other works (Xu and Ye, 2019; Lin et al., 2022) but are here sufficient for our discussion since they guarantee the unicity of a semi-inner product x.,.yB compatible with the norm ||.||B (Giles, 1967). S.1.1 Theoretical results Theorem 1 Theorem 1 gathers for the sake of compactness the definition of a vector-valued reproducing kernel Banach space with the properties of existence and unicity of the kernel K. Proof. For any v PV and u PU, the mapping Oรร xOpvq,uyU is a bounded linear form in LpBq.
State Sequences Prediction via Fourier Transform for Representation Learning
While deep reinforcement learning (RL) has been demonstrated effective in solving complex control tasks, sample efficiency remains a key challenge due to the large amounts of data required for remarkable performance. Existing research explores the application of representation learning for data-efficient RL, e.g., learning predictive representations by predicting long-term future states. However, many existing methods do not fully exploit the structural information inherent in sequential state signals, which can potentially improve the quality of long-term decision-making but is difficult to discern in the time domain. To tackle this problem, we propose State Sequences Prediction via Fourier Transform (SPF), a novel method that exploits the frequency domain of state sequences to extract the underlying patterns in time series data for learning expressive representations efficiently. Specifically, we theoretically analyze the existence of structural information in state sequences, which is closely related to policy performance and signal regularity, and then propose to predict the Fourier transform of infinite-step future state sequences to extract such information. One of the appealing features of SPF is that it is simple to implement while not requiring storage of infinite-step future states as prediction targets. Experiments demonstrate that the proposed method outperforms several state-of-the-art algorithms in terms of both sample efficiency and performance.2
Supplementary Material 7 Elements of Group and Representation Theory
In this section, we provide a brief introduction to the concepts from Group Theory which we need in our derivations. A group is a pair (G,)containing a set Gand a binary operation: G G! G,(h,g) 7! h g which satisfies the group axioms: Associativity: 8a,b,c 2 Ga (b c)=( a b) c Identity: 9e 2 G: 8g 2 Gg e = e g = g Inverse: 8g 2 G 9g 1 2 G: g g 1 = g 1 g = e The operation is the group law of G. The inverse elements g 1 of an element g, and the identity element e are unique. In addition, if the group law is also commutative, the group G is an abelian group. To simplify the notation, we commonly write ab instead of a b. It is also common to denote the group (G,) just with the name of its underlying set G. The order of a group G is the cardinality of its set and is indicated by |G|. A group G is finite when |G|2 N, i.e., when it has a finite number of elements. A compact group is a group that is also a compact topological space with continuous group operation. Given a group G, its action on a set X is a map . A simple example of group action is the group law itself: G G! Gwhich defines an action of G on its own elements (X = G). Another important action is the one defined on signals overs the group G. Given a signal x: G! R, the action of an element g 2 G maps x 7! g.x, [g.x](h):= x(g 1h).