feature engineering
SCOPE-FE: Structured Control of Operator and Pairwise Exploration for Feature Engineering
Park, Minhee, Son, Seongyeon, Lee, Yonghyun, Kim, Eunchan
Automatic feature engineering is an effective approach for improving predictive performance in tabular learning. However, expand-and-reduce methods, such as OpenFE, become increasingly computationally expensive as the input dimensionality grows. This limitation arises primarily from the combinatorial explosion of candidate features generated through operator-feature combinations. To address this issue, we propose SCOPE-FE, a structured search space control framework that improves efficiency by reducing the candidate space prior to feature generation. SCOPE-FE jointly regulates two major sources of combinatorial growth: the operator space and feature-pair space. First, OperatorProbing estimates the dataset-specific utility of candidate operators and eliminates low-contribution operators in advance. Second, FeatureClustering employs spectral embedding and fuzzy c-means clustering to group structurally related features, thereby restricting candidate generation to relevant within-cluster combinations. In addition, we introduce ReliabilityScoring, which incorporates variance across subsamples to stabilize pruning decisions. Experiments on ten benchmark datasets demonstrate that SCOPE-FE substantially reduces feature engineering time while maintaining competitive predictive performance relative to existing baselines. The efficiency gains are particularly pronounced for high-dimensional datasets. These results indicate that structured control of the search space is an effective strategy for scalable automatic feature engineering. The code will be made publicly available upon acceptance.
Large Language Models for Automated Data Science: Introducing CAAFE for Context-Aware Automated Feature Engineering
As the field of automated machine learning (AutoML) advances, it becomes increasingly important to incorporate domain knowledge into these systems. We present an approach for doing so by harnessing the power of large language models (LLMs). Specifically, we introduce Context-Aware Automated Feature Engineering (CAAFE), a feature engineering method for tabular datasets that utilizes an LLM to iteratively generate additional semantically meaningful features for tabular datasets based on the description of the dataset. The method produces both Python code for creating new features and explanations for the utility of the generated features. Despite being methodologically simple, CAAFE improves performance on 11 out of 14 datasets - boosting mean ROCAUC performance from 0.798 to 0.822 across all dataset - similar to the improvement achieved by using a random forest instead of logistic regression on our datasets. Furthermore, CAAFE is interpretable by providing a textual explanation for each generated feature. CAAFE paves the way for more extensive semi-automation in data science tasks and emphasizes the significance of context-aware solutions that can extend the scope of AutoML systems to semantic AutoML. We release our code, a simple demo and a python package.
A Data-Centric Perspective on Evaluating Machine Learning Models for Tabular Data
Tabular data is prevalent in real-world machine learning applications, and new models for supervised learning of tabular data are frequently proposed. Comparative studies assessing performance differences typically have model-centered evaluation setups with overly standardized data preprocessing. This limits the external validity of these studies, as in real-world modeling pipelines, models are typically applied after dataset-specific preprocessing and feature engineering. We address this gap by proposing a data-centric evaluation framework. We select 10 relevant datasets from Kaggle competitions and implement expert-level preprocessing pipelines for each dataset. We conduct experiments with different preprocessing pipelines and hyperparameter optimization (HPO) regimes to quantify the impact of model selection, HPO, feature engineering, and test-time adaptation. Our main findings reveal: 1) After dataset-specific feature engineering, model rankings change considerably, performance differences decrease, and the importance of model selection reduces.
EfficientECG: Cross-Attention with Feature Fusion for Efficient Electrocardiogram Classification
Deng, Hanhui, Li, Xinglin, Luo, Jie, Wu, Di
Electrocardiogram is a useful diagnostic signal that can detect cardiac abnormalities by measuring the electrical activity generated by the heart. Due to its rapid, non-invasive, and richly informative characteristics, ECG has many emerging applications. In this paper, we study novel deep learning technologies to effectively manage and analyse ECG data, with the aim of building a diagnostic model, accurately and quickly, that can substantially reduce the burden on medical workers. Unlike the existing ECG models that exhibit a high misdiagnosis rate, our deep learning approaches can automatically extract the features of ECG data through end-to-end training. Specifically, we first devise EfficientECG, an accurate and lightweight classification model for ECG analysis based on the existing EfficientNet model, which can effectively handle high-frequency long-sequence ECG data with various leading types. On top of that, we next propose a cross-attention-based feature fusion model of EfficientECG for analysing multi-lead ECG data with multiple features (e.g., gender and age). Our evaluations on representative ECG datasets validate the superiority of our model against state-of-the-art works in terms of high precision, multi-feature fusion, and lightweights.
Enhancing Dimensionality Prediction in Hybrid Metal Halides via Feature Engineering and Class-Imbalance Mitigation
Karabin, Mariia, Armstrong, Isaac, Beck, Leo, Apanel, Paulina, Eisenbach, Markus, Mitzi, David B., Terletska, Hanna, Heinz, Hendrik
We present a machine learning framework for predicting the structural dimensionality of hybrid metal halides (HMHs), including organic-inorganic perovskites, using a combination of chemically-informed feature engineering and advanced class-imbalance handling techniques. The dataset, consisting of 494 HMH structures, is highly imbalanced across dimensionality classes (0D, 1D, 2D, 3D), posing significant challenges to predictive modeling. This dataset was later augmented to 1336 via the Synthetic Minority Oversampling Technique (SMOTE) to mitigate the effects of the class imbalance. We developed interaction-based descriptors and integrated them into a multi-stage workflow that combines feature selection, model stacking, and performance optimization to improve dimensionality prediction accuracy. Our approach significantly improves F1-scores for underrepresented classes, achieving robust cross-validation performance across all dimensionalities.
ML-Tool-Bench: Tool-Augmented Planning for ML Tasks
Chittepu, Yaswanth, Addanki, Raghavendra, Mai, Tung, Rao, Anup, Kveton, Branislav
The development of autonomous machine learning (ML) agents capable of end-to-end data science workflows represents a significant frontier in artificial intelligence. These agents must orchestrate complex sequences of data analysis, feature engineering, model selection, and hyperparameter optimization, tasks that require sophisticated planning and iteration. While recent work on building ML agents has explored using large language models (LLMs) for direct code generation, tool-augmented approaches offer greater modularity and reliability. However, existing tool-use benchmarks focus primarily on task-specific tool selection or argument extraction for tool invocation, failing to evaluate the sophisticated planning capabilities required for ML Agents. In this work, we introduce a comprehensive benchmark for evaluating tool-augmented ML agents using a curated set of 61 specialized tools and 15 tabular ML challenges from Kaggle. Our benchmark goes beyond traditional tool-use evaluation by incorporating an in-memory named object management, allowing agents to flexibly name, save, and retrieve intermediate results throughout the workflows. We demonstrate that standard ReAct-style approaches struggle to generate valid tool sequences for complex ML pipelines, and that tree search methods with LLM-based evaluation underperform due to inconsistent state scoring. To address these limitations, we propose two simple approaches: 1) using shaped deterministic rewards with structured textual feedback, and 2) decomposing the original problem into a sequence of sub-tasks, which significantly improves trajectory validity and task performance. Using GPT-4o, our approach improves over ReAct by 16.52 percentile positions, taking the median across all Kaggle challenges. We believe our work provides a foundation for developing more capable tool-augmented planning ML agents.