correlated variable
Causal Explainability of Machine Learning in Heart Failure Prediction from Electronic Health Records
Hou, Yina, Rabbani, Shourav B., Hong, Liang, Diawara, Norou, Samad, Manar D.
The importance of clinical variables in the prognosis of the disease is explained using statistical correlation or machine learning (ML). However, the predictive importance of these variables may not represent their causal relationships with diseases. This paper uses clinical variables from a heart failure (HF) patient cohort to investigate the causal explainability of important variables obtained in statistical and ML contexts. Due to inherent regression modeling, popular causal discovery methods strictly assume that the cause and effect variables are numerical and continuous. This paper proposes a new computational framework to enable causal structure discovery (CSD) and score the causal strength of mixed-type (categorical, numerical, binary) clinical variables for binary disease outcomes. In HF classification, we investigate the association between the importance rank order of three feature types: correlated features, features important for ML predictions, and causal features. Our results demonstrate that CSD modeling for nonlinear causal relationships is more meaningful than its linear counterparts. Feature importance obtained from nonlinear classifiers (e.g., gradient-boosting trees) strongly correlates with the causal strength of variables without differentiating cause and effect variables. Correlated variables can be causal for HF, but they are rarely identified as effect variables. These results can be used to add the causal explanation of variables important for ML-based prediction modeling.
EigenNet: A Bayesian hybrid of generative and conditional models for sparse learning Yuan Qi
For many real-world applications, we often need to select correlated variables-- such as genetic variations and imaging features associated with Alzheimer's disease--in a high dimensional space. The correlation between variables presents a challenge to classical variable selection methods. To address this challenge, the elastic net has been developed and successfully applied to many applications. Despite its great success, the elastic net does not exploit the correlation information embedded in the data to select correlated variables. To overcome this limitation, we present a novel hybrid model, EigenNet, that uses the eigenstructures of data to guide variable selection.
FDR-Controlled Portfolio Optimization for Sparse Financial Index Tracking
Machkour, Jasin, Palomar, Daniel P., Muma, Michael
In high-dimensional data analysis, such as financial index tracking or biomedical applications, it is crucial to select the few relevant variables while maintaining control over the false discovery rate (FDR). In these applications, strong dependencies often exist among the variables (e.g., stock returns), which can undermine the FDR control property of existing methods like the model-X knockoff method or the T-Rex selector. To address this issue, we have expanded the T-Rex framework to accommodate overlapping groups of highly correlated variables. This is achieved by integrating a nearest neighbors penalization mechanism into the framework, which provably controls the FDR at the user-defined target level. A real-world example of sparse index tracking demonstrates the proposed method's ability to accurately track the S&P 500 index over the past 20 years based on a small number of stocks. An open-source implementation is provided within the R package TRexSelector on CRAN.
Fighting doppelgรคngers. How to rid data of evil twins reducingโฆ
When working with data produced by sensors recording machinery events, large datasets including hundreds or thousands of variables are usual. In these cases, many variables can be candidates to predict some target measures. However, especially in industrial contexts, data can include fully linearly dependent or very correlated variables. For example, a sensor can extract several features from the same process as linear transformations of the same basis (like the sum of a set of records, their mean, etc.). In other cases, there are genuinely different measures but related by nature, or representing two opposite facets of the same phenomenon (imagine two complementary elements of a chemical mixture).
Discrimination in machine learning algorithms
Pappadร , Roberta, Pauli, Francesco
A human may discriminate either because of irrational prejudice induced by ignorance and stereotypes or based on statistical generalization: lacking specific information on an individual, he is assigned the characteristics prevalent in the sensitive attribute category he belongs to. For example, in the United States, lacking information on education, a black person may be assumed to have relatively low level since this is the case in general for black people in the country) [7]. When a statistical or machine learning algorithm is used in the decision process, its behavior concerning discrimination depends on the information it is given. In particular, if the sensitive attribute is available to the algorithm (i.e., it is included in the learning data and can be used for predictions), it may discriminate either because the data it is taught contain irrational prejudice (Figure 1(a)) or because the sensitive attribute is associated to an unobserved attribute that is relevant for the prediction of Y, the outcome of interest (Figure 1(b)).
Tracy-Widom Distribution
TracyโWidom distribution is a universal rule describing the distribution of any set of correlated variables. Instead of the smooth bell curve found with Gaussian distribution for uncorrelated variables, this distribution gives an asymmetrical statistical bump for correlated variables. The left side is steeper than the right and its summit sits at a scalable, universal value of 2N. This is also referred to as the transition point or crossover function between between stability and instability in various systems.
The Yield Curve as a Recession Leading Indicator. An Application for Gradient Boosting and Random Forest
Delgado, Pedro Cadahia, Congregado, Emilio, Golpe, Antonio A., Vides, Josรฉ Carlos
Most representative decision tree ensemble methods have been used to examine the variable importance of Treasury term spreads to predict US economic recessions with a balance of generating rules for US economic recession detection. A strategy is proposed for training the classifiers with Treasury term spreads data and the results are compared in order to select the best model for interpretability. We also discuss the use of SHapley Additive exPlanations (SHAP) framework to understand US recession forecasts by analyzing feature importance. Consistently with the existing literature we find the most relevant Treasury term spreads for predicting US economic recession and a methodology for detecting relevant rules for economic recession detection. In this case, the most relevant term spread found is 3 month to 6 month, which is proposed to be monitored by economic authorities. Finally, the methodology detected rules with high lift on predicting economic recession that can be used by these entities for this propose. This latter result stands in contrast to a growing body of literature demonstrating that machine learning methods are useful for interpretation comparing many alternative algorithms and we discuss the interpretation for our result and propose further research lines aligned with this work.
FSPN: A New Class of Probabilistic Graphical Model
Wu, Ziniu, Zhu, Rong, Pfadler, Andreas, Han, Yuxing, Li, Jiangneng, Qian, Zhengping, Zeng, Kai, Zhou, Jingren
We introduce factorize sum split product networks (FSPNs), a new class of probabilistic graphical models (PGMs). FSPNs are designed to overcome the drawbacks of existing PGMs in terms of estimation accuracy and inference efficiency. Specifically, Bayesian networks (BNs) have low inference speed and performance of tree structured sum product networks(SPNs) significantly degrades in presence of highly correlated variables. FSPNs absorb their advantages by adaptively modeling the joint distribution of variables according to their dependence degree, so that one can simultaneously attain the two desirable goals: high estimation accuracy and fast inference speed. We present efficient probability inference and structure learning algorithms for FSPNs, along with a theoretical analysis and extensive evaluation evidence. Our experimental results on synthetic and benchmark datasets indicate the superiority of FSPN over other PGMs.
Feature Selection in Machine Learning
In the real world, data is not as clean as it's often assumed to be. That's where all the data mining and wrangling comes in; to build insights out of the data that has been structured using queries, and now probably contains certain missing values, and exhibits possible patterns that are unseen to the naked eye. That's where Machine Learning comes in: To check for patterns and make use of those patterns to predict outcomes using these newly understood relationships in the data. For one to understand the depth of the algorithm, one needs to read through the variables in the data, and what those variables represent. Understanding this is important, because when you need to prove your outcomes, based on your understanding of the data.
Independently Interpretable Lasso: A New Regularizer for Sparse Regression with Uncorrelated Variables
Takada, Masaaki, Suzuki, Taiji, Fujisawa, Hironori
Sparse regularization such as $\ell_1$ regularization is a quite powerful and widely used strategy for high dimensional learning problems. The effectiveness of sparse regularization has been supported practically and theoretically by several studies. However, one of the biggest issues in sparse regularization is that its performance is quite sensitive to correlations between features. Ordinary $\ell_1$ regularization can select variables correlated with each other, which results in deterioration of not only its generalization error but also interpretability. In this paper, we propose a new regularization method, "Independently Interpretable Lasso" (IILasso). Our proposed regularizer suppresses selecting correlated variables, and thus each active variable independently affects the objective variable in the model. Hence, we can interpret regression coefficients intuitively and also improve the performance by avoiding overfitting. We analyze theoretical property of IILasso and show that the proposed method is much advantageous for its sign recovery and achieves almost minimax optimal convergence rate. Synthetic and real data analyses also indicate the effectiveness of IILasso.