Ancient manuscripts are the primary source of ancient linguistic corpora. However, many ancient manuscripts exhibit duplications due to unintentional repeated publication or deliberate forgery. The Dead Sea Scrolls, for example, include counterfeit fragments, whereas Oracle Bones (OB) contain both republished materials and fabricated specimens. Identifying ancient manuscript duplicates is of great significance for both archaeological curation and ancient history study. In this work, we design a progressive OB duplicate discovery framework that combines unsupervised low-level keypoints matching with high-level text-centric content-based matching to refine and rank the candidate OB duplicates with semantic awareness and interpretability. We compare our model with state-of-the-art content-based image retrieval and image matching methods, showing that our model yields comparable recall performance and the highest simplified mean reciprocal rank scores for both Top-5 and Top-15 retrieval results, and with significantly accelerated computation efficiency. We have discovered over 60 pairs of new OB duplicates in real-world deployment, which were missed by domain experts for decades. Code, model and real-world results are available at: https://github.com/cszhangLMU/OBD-Finder/.

Digital pathology, augmented by artificial intelligence (AI), holds significant promise for improving the workflow of pathologists. However, challenges such as the labor-intensive annotation of whole slide images (WSIs), high computational demands, and trust concerns arising from the absence of uncertainty estimation in predictions hinder the practical application of current AI methodologies in histopathology. To address these issues, we present a novel trustful fully unsupervised multi-level segmentation methodology (TUMLS) for WSIs. TUMLS adopts an autoencoder (AE) as a feature extractor to identify the different tissue types within low-resolution training data. It selects representative patches from each identified group based on an uncertainty measure and then does unsupervised nuclei segmentation in their respective higher-resolution space without using any ML algorithms. Crucially, this solution integrates seamlessly into clinicians workflows, transforming the examination of a whole WSI into a review of concise, interpretable cross-level insights. This integration significantly enhances and accelerates the workflow while ensuring transparency. We evaluated our approach using the UPENN-GBM dataset, where the AE achieved a mean squared error (MSE) of 0.0016. Additionally, nucleus segmentation is assessed on the MoNuSeg dataset, outperforming all unsupervised approaches with an F1 score of 77.46% and a Jaccard score of 63.35%. These results demonstrate the efficacy of TUMLS in advancing the field of digital pathology.

Current methods for searching brain MR images rely on text-based approaches, highlighting a significant need for content-based image retrieval (CBIR) systems. Directly applying 3D brain MR images to machine learning models offers the benefit of effectively learning the brain's structure; however, building the generalized model necessitates a large amount of training data. While models that consider depth direction and utilize continuous 2D slices have demonstrated success in segmentation and classification tasks involving 3D data, concerns remain. Specifically, using general 2D slices may lead to the oversight of pathological features and discontinuities in depth direction information. Furthermore, to the best of the authors' knowledge, there have been no attempts to develop a practical CBIR system that preserves the entire brain's structural information. In this study, we propose an interpretable CBIR method for brain MR images, named iCBIR-Sli (Interpretable CBIR with 2D Slice Embedding), which, for the first time globally, utilizes a series of 2D slices. iCBIR-Sli addresses the challenges associated with using 2D slices by effectively aggregating slice information, thereby achieving low-dimensional representations with high completeness, usability, robustness, and interoperability, which are qualities essential for effective CBIR. In retrieval evaluation experiments utilizing five publicly available brain MR datasets (ADNI2/3, OASIS3/4, AIBL) for Alzheimer's disease and cognitively normal, iCBIR-Sli demonstrated top-1 retrieval performance (macro F1 = 0.859), comparable to existing deep learning models explicitly designed for classification, without the need for an external classifier. Additionally, the method provided high interpretability by clearly identifying the brain regions indicative of the searched-for disease.

When conducting large-scale studies that collect brain MR images from multiple facilities, the impact of differences in imaging equipment and protocols at each site cannot be ignored, and this domain gap has become a significant issue in recent years. In this study, we propose a new low-dimensional representation (LDR) acquisition method called style encoder adversarial domain adaptation (SE-ADA) to realize content-based image retrieval (CBIR) of brain MR images. SE-ADA reduces domain differences while preserving pathological features by separating domain-specific information from LDR and minimizing domain differences using adversarial learning. In evaluation experiments comparing SE-ADA with recent domain harmonization methods on eight public brain MR datasets (ADNI1/2/3, OASIS1/2/3/4, PPMI), SE-ADA effectively removed domain information while preserving key aspects of the original brain structure and demonstrated the highest disease search accuracy.

While content-based image retrieval (CBIR) has been extensively studied in natural image retrieval, its application to medical images presents ongoing challenges, primarily due to the 3D nature of medical images. Recent studies have shown the potential use of pre-trained vision embeddings for CBIR in the context of radiology image retrieval. However, a benchmark for the retrieval of 3D volumetric medical images is still lacking, hindering the ability to objectively evaluate and compare the efficiency of proposed CBIR approaches in medical imaging. In this study, we extend previous work and establish a benchmark for region-based and localized multi-organ retrieval using the TotalSegmentator dataset (TS) with detailed multi-organ annotations. We benchmark embeddings derived from pre-trained supervised models on medical images against embeddings derived from pre-trained unsupervised models on non-medical images for 29 coarse and 104 detailed anatomical structures in volume and region levels. For volumetric image retrieval, we adopt a late interaction re-ranking method inspired by text matching. We compare it against the original method proposed for volume and region retrieval and achieve a retrieval recall of 1.0 for diverse anatomical regions with a wide size range. The findings and methodologies presented in this paper provide insights and benchmarks for further development and evaluation of CBIR approaches in the context of medical imaging.

The growing volume of digital images necessitates advanced systems for efficient categorization and retrieval, presenting a significant challenge in database management and information retrieval. This paper introduces PICS (Pipeline for Image Captioning and Search), a novel approach designed to address the complexities inherent in organizing large-scale image repositories. PICS leverages the advancements in Large Language Models (LLMs) to automate the process of image captioning, offering a solution that transcends traditional manual annotation methods. The approach is rooted in the understanding that meaningful, AI-generated captions can significantly enhance the searchability and accessibility of images in large databases. By integrating sentiment analysis into the pipeline, PICS further enriches the metadata, enabling nuanced searches that extend beyond basic descriptors. This methodology not only simplifies the task of managing vast image collections but also sets a new precedent for accuracy and efficiency in image retrieval. The significance of PICS lies in its potential to transform image database systems, harnessing the power of machine learning and natural language processing to meet the demands of modern digital asset management.

Content-based image retrieval (CBIR) systems have emerged as crucial tools in the field of computer vision, allowing for image search based on visual content rather than relying solely on metadata. This survey paper presents a comprehensive overview of CBIR, emphasizing its role in object detection and its potential to identify and retrieve visually similar images based on content features. Challenges faced by CBIR systems, including the semantic gap and scalability, are discussed, along with potential solutions. It elaborates on the semantic gap, which arises from the disparity between low-level features and high-level semantic concepts, and explores approaches to bridge this gap. One notable solution is the integration of relevance feedback (RF), empowering users to provide feedback on retrieved images and refine search results iteratively. The survey encompasses long-term and short-term learning approaches that leverage RF for enhanced CBIR accuracy and relevance. These methods focus on weight optimization and the utilization of active learning algorithms to select samples for training classifiers. Furthermore, the paper investigates machine learning techniques and the utilization of deep learning and convolutional neural networks to enhance CBIR performance. This survey paper plays a significant role in advancing the understanding of CBIR and RF techniques. It guides researchers and practitioners in comprehending existing methodologies, challenges, and potential solutions while fostering knowledge dissemination and identifying research gaps. By addressing future research directions, it sets the stage for advancements in CBIR that will enhance retrieval accuracy, usability, and effectiveness in various application domains.

Content-based image retrieval (CBIR) systems are an emerging technology that supports reading and interpreting medical images. Since 3D brain MR images are high dimensional, dimensionality reduction is necessary for CBIR using machine learning techniques. In addition, for a reliable CBIR system, each dimension in the resulting low-dimensional representation must be associated with a neurologically interpretable region. We propose a localized variational autoencoder (Loc-VAE) that provides neuroanatomically interpretable low-dimensional representation from 3D brain MR images for clinical CBIR. Loc-VAE is based on $\beta$-VAE with the additional constraint that each dimension of the low-dimensional representation corresponds to a local region of the brain. The proposed Loc-VAE is capable of acquiring representation that preserves disease features and is highly localized, even under high-dimensional compression ratios (4096:1). The low-dimensional representation obtained by Loc-VAE improved the locality measure of each dimension by 4.61 points compared to naive $\beta$-VAE, while maintaining comparable brain reconstruction capability and information about the diagnosis of Alzheimer's disease.

Deep learning-based approaches for content-based image retrieval (CBIR) of CT liver images is an active field of research, but suffers from some critical limitations. First, they are heavily reliant on labeled data, which can be challenging and costly to acquire. Second, they lack transparency and explainability, which limits the trustworthiness of deep CBIR systems. We address these limitations by (1) proposing a self-supervised learning framework that incorporates domain-knowledge into the training procedure and (2) providing the first representation learning explainability analysis in the context of CBIR of CT liver images. Results demonstrate improved performance compared to the standard self-supervised approach across several metrics, as well as improved generalisation across datasets. Further, we conduct the first representation learning explainability analysis in the context of CBIR, which reveals new insights into the feature extraction process. Lastly, we perform a case study with cross-examination CBIR that demonstrates the usability of our proposed framework. We believe that our proposed framework could play a vital role in creating trustworthy deep CBIR systems that can successfully take advantage of unlabeled data.

To start with, I need to define an important term. A query image is an image the user enters to obtain information. With the help of a similarity block, the system searches for similar images among a dataset, which computes how close the images are to each other. Image 1 illustrates the steps. In section 3, we will be looking into this similarity block and exploring the most common methods of achieving this functionality.