Goto

Collaborating Authors

 conditional diffusion model


Closed-form conditional diffusion models for data assimilation

Binder, Brianna, Dasgupta, Agnimitra, Oberai, Assad

arXiv.org Machine Learning

We propose closed-form conditional diffusion models for data assimilation. Diffusion models use data to learn the score function (defined as the gradient of the log-probability density of a data distribution), allowing them to generate new samples from the data distribution by reversing a noise injection process. While it is common to train neural networks to approximate the score function, we leverage the analytical tractability of the score function to assimilate the states of a system with measurements. To enable the efficient evaluation of the score function, we use kernel density estimation to model the joint distribution of the states and their corresponding measurements. The proposed approach also inherits the capability of conditional diffusion models of operating in black-box settings, i.e., the proposed data assimilation approach can accommodate systems and measurement processes without their explicit knowledge. The ability to accommodate black-box systems combined with the superior capabilities of diffusion models in approximating complex, non-Gaussian probability distributions means that the proposed approach offers advantages over many widely used filtering methods. We evaluate the proposed method on nonlinear data assimilation problems based on the Lorenz-63 and Lorenz-96 systems of moderate dimensionality and nonlinear measurement models. Results show the proposed approach outperforms the widely used ensemble Kalman and particle filters when small to moderate ensemble sizes are used.









Deep Bootstrap

Chang, Jinyuan, Jiao, Yuling, Kang, Lican, Shi, Junjie

arXiv.org Machine Learning

As a result, the demands for interval estimation, and consequently for its validity and precision, have experienced a sustained increase over time and are reflected in a number of recent studies. For example, in proteomics, confidence intervals are employed to assess the association between post-translational modifications and intrinsically disordered regions of proteins, validating hypotheses derived from predictive models and facilitating large-scale functional analyses (Tunyasuvunakool et al., 2021; Bludau et al., 2022). In genomic research, confidence intervals are leveraged to characterize the distribution of gene expression levels, enabling robust inferences about promoter sequence effects and genetic variability (Vaishnav et al., 2022). In the realm of environmental science, interval estimation can be used to monitor deforestation rates of forests, yielding uncertainty-aware insights critical for climate policy formulation (Bullock et al., 2020). As for social sciences, confidence intervals are utilized to evaluate relationships between socioeconomic factors, bolstering the robustness of conclusions drawn from census data (Ding et al., 2021).