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 coil sensitivity


Product of Gaussian Mixture Diffusion Model for non-linear MRI Inversion

arXiv.org Artificial Intelligence

Diffusion models have recently shown remarkable results in magnetic resonance imaging reconstruction. However, the employed networks typically are black-box estimators of the (smoothed) prior score with tens of millions of parameters, restricting interpretability and increasing reconstruction time. Furthermore, parallel imaging reconstruction algorithms either rely on off-line coil sensitivity estimation, which is prone to misalignment and restricting sampling trajectories, or perform per-coil reconstruction, making the computational cost proportional to the number of coils. To overcome this, we jointly reconstruct the image and the coil sensitivities using the lightweight, parameter-efficient, and interpretable product of Gaussian mixture diffusion model as an image prior and a classical smoothness priors on the coil sensitivities. The proposed method delivers promising results while allowing for fast inference and demonstrating robustness to contrast out-of-distribution data and sampling trajectories, comparable to classical variational penalties such as total variation. Finally, the probabilistic formulation allows the calculation of the posterior expectation and pixel-wise variance.


IMJENSE: Scan-specific Implicit Representation for Joint Coil Sensitivity and Image Estimation in Parallel MRI

arXiv.org Artificial Intelligence

Parallel imaging is a commonly used technique to accelerate magnetic resonance imaging (MRI) data acquisition. Mathematically, parallel MRI reconstruction can be formulated as an inverse problem relating the sparsely sampled k-space measurements to the desired MRI image. Despite the success of many existing reconstruction algorithms, it remains a challenge to reliably reconstruct a high-quality image from highly reduced k-space measurements. Recently, implicit neural representation has emerged as a powerful paradigm to exploit the internal information and the physics of partially acquired data to generate the desired object. In this study, we introduced IMJENSE, a scan-specific implicit neural representation-based method for improving parallel MRI reconstruction. Specifically, the underlying MRI image and coil sensitivities were modeled as continuous functions of spatial coordinates, parameterized by neural networks and polynomials, respectively. The weights in the networks and coefficients in the polynomials were simultaneously learned directly from sparsely acquired k-space measurements, without fully sampled ground truth data for training. Benefiting from the powerful continuous representation and joint estimation of the MRI image and coil sensitivities, IMJENSE outperforms conventional image or k-space domain reconstruction algorithms. With extremely limited calibration data, IMJENSE is more stable than supervised calibrationless and calibration-based deep-learning methods. Results show that IMJENSE robustly reconstructs the images acquired at 5$\mathbf{\times}$ and 6$\mathbf{\times}$ accelerations with only 4 or 8 calibration lines in 2D Cartesian acquisitions, corresponding to 22.0% and 19.5% undersampling rates. The high-quality results and scanning specificity make the proposed method hold the potential for further accelerating the data acquisition of parallel MRI.


Calibrationless Parallel MRI using Model based Deep Learning (C-MODL)

arXiv.org Machine Learning

We introduce a fast model based deep learning approach for calibrationless parallel MRI reconstruction. The proposed scheme is a non-linear generalization of structured low rank (SLR) methods that self learn linear annihilation filters from the same subject. It pre-learns non-linear annihilation relations in the Fourier domain from exemplar data. The pre-learning strategy significantly reduces the computational complexity, making the proposed scheme three orders of magnitude faster than SLR schemes. The proposed framework also allows the use of a complementary spatial domain prior; the hybrid regularization scheme offers improved performance over calibrated image domain MoDL approach. The calibrationless strategy minimizes potential mismatches between calibration data and the main scan, while eliminating the need for a fully sampled calibration region.