anatomical view
CMRxRecon2024: A Multi-Modality, Multi-View K-Space Dataset Boosting Universal Machine Learning for Accelerated Cardiac MRI
Wang, Zi, Wang, Fanwen, Qin, Chen, Lyu, Jun, Cheng, Ouyang, Wang, Shuo, Li, Yan, Yu, Mengyao, Zhang, Haoyu, Guo, Kunyuan, Shi, Zhang, Li, Qirong, Xu, Ziqiang, Zhang, Yajing, Li, Hao, Hua, Sha, Chen, Binghua, Sun, Longyu, Sun, Mengting, Li, Qin, Chu, Ying-Hua, Bai, Wenjia, Qin, Jing, Zhuang, Xiahai, Prieto, Claudia, Young, Alistair, Markl, Michael, Wang, He, Wu, Lianming, Yang, Guang, Qu, Xiaobo, Wang, Chengyan
Cardiac magnetic resonance imaging (MRI) has emerged as a clinically gold-standard technique for diagnosing cardiac diseases, thanks to its ability to provide diverse information with multiple modalities and anatomical views. Accelerated cardiac MRI is highly expected to achieve time-efficient and patient-friendly imaging, and then advanced image reconstruction approaches are required to recover high-quality, clinically interpretable images from undersampled measurements. However, the lack of publicly available cardiac MRI k-space dataset in terms of both quantity and diversity has severely hindered substantial technological progress, particularly for data-driven artificial intelligence. Here, we provide a standardized, diverse, and high-quality CMRxRecon2024 dataset to facilitate the technical development, fair evaluation, and clinical transfer of cardiac MRI reconstruction approaches, towards promoting the universal frameworks that enable fast and robust reconstructions across different cardiac MRI protocols in clinical practice. To the best of our knowledge, the CMRxRecon2024 dataset is the largest and most diverse publicly available cardiac k-space dataset. It is acquired from 330 healthy volunteers, covering commonly used modalities, anatomical views, and acquisition trajectories in clinical cardiac MRI workflows. Besides, an open platform with tutorials, benchmarks, and data processing tools is provided to facilitate data usage, advanced method development, and fair performance evaluation.
A Deep Network for Explainable Prediction of Non-Imaging Phenotypes using Anatomical Multi-View Data
Wei, Yuxiang, Chen, Yuqian, Xue, Tengfei, Zekelman, Leo, Makris, Nikos, Rathi, Yogesh, Cai, Weidong, Zhang, Fan, Donnell, Lauren J. O'
Large datasets often contain multiple distinct feature sets, or views, that offer complementary information that can be exploited by multi-view learning methods to improve results. We investigate anatomical multi-view data, where each brain anatomical structure is described with multiple feature sets. In particular, we focus on sets of white matter microstructure and connectivity features from diffusion MRI, as well as sets of gray matter area and thickness features from structural MRI. We investigate machine learning methodology that applies multi-view approaches to improve the prediction of non-imaging phenotypes, including demographics (age), motor (strength), and cognition (picture vocabulary). We present an explainable multi-view network (EMV-Net) that can use different anatomical views to improve prediction performance. In this network, each individual anatomical view is processed by a view-specific feature extractor and the extracted information from each view is fused using a learnable weight. This is followed by a wavelet transform-based module to obtain complementary information across views which is then applied to calibrate the view-specific information. Additionally, the calibrator produces an attention-based calibration score to indicate anatomical structures' importance for interpretation.