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AI Magazine

NASA Ames Research Center Polish Academy of Sciences URL: www.taai.org.tw/announce/ (PRICAI 2004). (ICKEDS 2004). This book looks at some of the results of the synergy among AI, cognitive science, and education. Examples include virtual students whose misconceptions force students to reflect on their own knowledge, intelligent tutoring systems, and speech recognition technology that helps students learn to read.


Report on the Second International Joint Conference on Autonomous Agents and Multiagent Systems

AI Magazine

The Second International Joint Conference on Autonomous Agents and Multiagent Systems (AAMAS-03) was held in Melbourne, Australia, in July 2003. Attracting nearly 500 delegates, the event confirmed AAMAS as the academic main event for researchers with an interest in multiagent systems. We summarize the conference highlights and report on the associated workshops, tutorials, and emerging trends.


Applying Inductive Logic Programming to Predicting Gene Function

AI Magazine

One of the fastest advancing areas of modern science is functional genomics. This science seeks to understand how the complete complement of molecular components of living organisms (nucleic acid, protein, small molecules, and so on) interact together to form living organisms. Functional genomics is of interest to AI because the relationship between machines and living organisms is central to AI and because the field is an instructive and fun domain to apply and sharpen AI tools and ideas, requiring complex knowledge representation, reasoning, learning, and so on. This article describes two machine learning (inductive logic programming [ILP])-based approaches to the bioinformatic problem of predicting protein function from amino acid sequence. The first approach is based on using ILP as a way of bootstrapping from conventional sequence-based homology methods. The second approach used protein-functional ontologies to provide function classes and a hybrid ILP method to predict function directly from sequence. Both ILP approaches were successful in producing accurate prediction rules that could biologically be interpreted. The work was also of interest to machine learning research because it highlighted the flexibility of ILP systems in dealing with heterogeneous data, the importance of problems where classes are related hierarchically, and problems where examples have more than one functional class.


The Semantic Web and Language Technology, Its Potential and Practicalities: EUROLAN-2003

AI Magazine

Later in the school, the focus turned to ontologies, which is where the true power of the semantic web lies. EUROLAN lecturers treated its potential in terms of what the topic of ontology development it might--and might not--bring to us in the future. This year's and how great its impact will really start somewhere, somehow, even if school was organized by the Faculty be. Although it is not yet clear what emerges is a variety of ontological of Computer Science at the A. I. Cuza whether the current vision of the semantic stores from which to choose. University of Iasi, the Research Institute web will indeed reach its expectations, The EUROLAN summer school also for Artificial Intelligence at the there are more and more included a workshop on ontologies Romanian Academy in Bucharest, opinions that it represents a major and information extraction, a student and the Department of Computer technological step that will permanently workshop on applied natural Science at Vassar College.


Semantic Integration Workshop at the Second International Semantic Web Conference (ISWC-2003)

AI Magazine

In numerous distributed environments, including today's World Wide Web, enterprise data management systems, large science projects, and the emerging semantic web, applications will inevitably use the information described by multiple ontologies and schemas. We organized the Workshop on Semantic Integration at the Second International Semantic Web Conference to bring together different communities working on the issues of enabling integration among different resources. The workshop generated a lot of interest and attracted more than 70 participants.


Using Machine Learning to Design and Interpret Gene-Expression Microarrays

AI Magazine

Gene-expression microarrays, commonly called gene chips, make it possible to simultaneously measure the rate at which a cell or tissue is expressing -- translating into a protein -- each of its thousands of genes. One can use these comprehensive snapshots of biological activity to infer regulatory pathways in cells; identify novel targets for drug design; and improve the diagnosis, prognosis, and treatment planning for those suffering from disease. However, the amount of data this new technology produces is more than one can manually analyze. Hence, the need for automated analysis of microarray data offers an opportunity for machine learning to have a significant impact on biology and medicine. This article describes microarray technology, the data it produces, and the types of machine learning tasks that naturally arise with these data. It also reviews some of the recent prominent applications of machine learning to gene-chip data, points to related tasks where machine learning might have a further impact on biology and medicine, and describes additional types of interesting data that recent advances in biotechnology allow biomedical researchers to collect.


Representation Dependence in Probabilistic Inference

Journal of Artificial Intelligence Research

Non-deductive reasoning systems are often representation dependent: representing the same situation in two different ways may cause such a system to return two different answers. Some have viewed this as a significant problem. For example, the principle of maximum entropyhas been subjected to much criticism due to its representation dependence. There has, however, been almost no work investigating representation dependence. In this paper, we formalize this notion and show that it is not a problem specific to maximum entropy. In fact, we show that any representation-independent probabilistic inference procedure that ignores irrelevant information is essentially entailment, in a precise sense. Moreover, we show that representation independence is incompatible with even a weak default assumption of independence. We then show that invariance under a restricted class of representation changes can form a reasonable compromise between representation independence and other desiderata, and provide a construction of a family of inference procedures that provides such restricted representation independence, using relative entropy.


A Personalized System for Conversational Recommendations

Journal of Artificial Intelligence Research

Searching for and making decisions about information is becoming increasingly difficult as the amount of information and number of choices increases. Recommendation systems help users find items of interest of a particular type, such as movies or restaurants, but are still somewhat awkward to use. Our solution is to take advantage of the complementary strengths of personalized recommendation systems and dialogue systems, creating personalized aides. We present a system -- the Adaptive Place Advisor -- that treats item selection as an interactive, conversational process, with the program inquiring about item attributes and the user responding. Individual, long-term user preferences are unobtrusively obtained in the course of normal recommendation dialogues and used to direct future conversations with the same user. We present a novel user model that influences both item search and the questions asked during a conversation. We demonstrate the effectiveness of our system in significantly reducing the time and number of interactions required to find a satisfactory item, as compared to a control group of users interacting with a non-adaptive version of the system.


IDL-Expressions: A Formalism for Representing and Parsing Finite Languages in Natural Language Processing

Journal of Artificial Intelligence Research

We propose a formalism for representation of finite languages, referred to as the class of IDL-expressions, which combines concepts that were only considered in isolation in existing formalisms. The suggested applications are in natural language processing, more specifically in surface natural language generation and in machine translation, where a sentence is obtained by first generating a large set of candidate sentences, represented in a compact way, and then by filtering such a set through a parser. We study several formal properties of IDL-expressions and compare this new formalism with more standard ones. We also present a novel parsing algorithm for IDL-expressions and prove a non-trivial upper bound on its time complexity.


Coherent Integration of Databases by Abductive Logic Programming

Journal of Artificial Intelligence Research

Abstract: We introduce an abductive method for a coherent integration of independent data-sources. The idea is to compute a list of data-facts that should be inserted to the amalgamated database or retracted from it in order to restore its consistency. This method is implemented by an abductive solver, called Asystem, that applies SLDNFA-resolution on a meta-theory that relates different, possibly contradicting, input databases. We also give a pure model-theoretic analysis of the possible ways to `recover' consistent data from an inconsistent database in terms of those models of the database that exhibit as minimal inconsistent information as reasonably possible. This allows us to characterize the `recovered databases' in terms of the `preferred' (i.e., most consistent) models of the theory. The outcome is an abductive-based application that is sound and complete with respect to a corresponding model-based, preferential semantics, and -- to the best of our knowledge -- is more expressive (thus more general) than any other implementation of coherent integration of databases.